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ATCC64974_30860-T1, ATCC64974_30860-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_30860-T1
Unique NameATCC64974_30860-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1301756..1303255-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_30860-T1 ID=ATCC64974_30860-T1|Name=ATCC64974_30860-T1|organism=Aspergillus niger N402|type=mRNA|length=1500bp|location=Sequence derived from alignment at OGUI01000004.1:1301756..1303255- (Aspergillus niger N402)
ATGTTCTCCCGCCGAAACCTCGTCGCCCTAGGGCTGGCAGCCACCGTCAG
CGCCGGCCCCTGTGACATCTACGAAGCCGGCGACACGCCCTGCGTAGCCG
CGCACAGCACCACCCGCGCCCTATACAGCTCCTTCAGCGGCGCCCTCTAC
CAGCTCCAACGTGGCTCCGACGACACCACCACCACCATCTCCCCGCTCAC
AGCCGGCGGCGTCGCCGACGCCTCCGCCCAAGACACCTTCTGTGCCAACA
CCACCTGCTTGATCACCATCATCTACGACCAATCCGGCAACGGCAACCAC
CTGACCCAAGCACCCCCGGGAGGCTTCGACGGCCCCGACGTCGACGGCTA
CGACAACCTCGCCAGCGCCATCGGCGCCCCCGTCACCCTCAATGGCCAAA
AGGCCTACGGCGTGTTCATGTCCCCCGGCACGGGCTACCGTAACAACGAA
GCCACCGGCACCGCCACCGGCGACGAACCCGAAGGCATGTACGCCGTCCT
GGACGGCACGCACTACAACGACGCCTGCTGCTTCGACTACGGCAACGCCG
AGACCAGCAGCACCGACACTGGCGCCGGCCACATGGAGGCCATCTACCTC
GGGAACAGCACCACCTGGGGCTACGGCGCCGGTGACGGGCCCTGGATCAT
GGTCGATATGGAGAACAACCTCTTCTCCGGTGCTGATGAGGGATATAACT
CCGGAGATCCCTCGATCAGCTACAGCTTTGTCACTGCCGCGGTCAAGGGC
GGGGCTGATAAGTGGGCTATTCGCGGTGGTAATGCTGCCTCTGGGTCCCT
CTCTACTTACTACAGCGGCGCTCGCCCGGATTACTCCGGCTATAACCCCA
TGAGCAAGGAGGGCGCTATCATCCTGGGTATCGGCGGTGACAACAGCAAC
GGCGCCCAGGGTACCTTCTACGAGGGTGTCATGACCTCCGGCTACCCGTC
GGACGATGTCGAGAACTCCGTCCAGGAGAACATCGTGGCTGCGAAATACG
TCTCCGGCTCGCTGGTCAGCGGCCCGTCGTTCACCTCCGGAGAGGTGGTC
TCGCTGCGTGTCACTACCCCCGGTTACACGACGCGGTATATTGCGCACAC
TGACACCACTGTGAACACGCAGGTCGTGGACGACGATAGTTCCACCACGC
TGAAGGAGGAGGCTAGCTGGACCGTGGTGACAGGTCTGGCTAATAGTCAG
TGCTTCTCGTTCGAGTCGGTTGATACCCCTGGTAGCTATATCCGGCATTA
CAACTTTGAGTTGCTGCTTAATGCCAACGATGGCACGAAGCAGTTCCATG
AGGATGCTACTTTCTGTCCTCAGGCGCCGTTGAATGGAGAAGGTACTTCG
TTGAGATCGTGGAGTTATCCGACGAGGTATTTCAGGCATTATGAGAATGT
CCTGTATGCTGCTAGTAATGGTGGTGTGCAGACGTTTGATTCCAAGACGT
CGTTTAATAATGATGTTAGCTTTGAGATTGAGACGGCGTTTGCTTCGTAA
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Coding sequence (CDS) from alignment at OGUI01000004.1:1301756..1303255-

>ATCC64974_30860-T1 ID=ATCC64974_30860-T1|Name=ATCC64974_30860-T1|organism=Aspergillus niger N402|type=CDS|length=1500bp|location=Sequence derived from alignment at OGUI01000004.1:1301756..1303255- (Aspergillus niger N402)
ATGTTCTCCCGCCGAAACCTCGTCGCCCTAGGGCTGGCAGCCACCGTCAG
CGCCGGCCCCTGTGACATCTACGAAGCCGGCGACACGCCCTGCGTAGCCG
CGCACAGCACCACCCGCGCCCTATACAGCTCCTTCAGCGGCGCCCTCTAC
CAGCTCCAACGTGGCTCCGACGACACCACCACCACCATCTCCCCGCTCAC
AGCCGGCGGCGTCGCCGACGCCTCCGCCCAAGACACCTTCTGTGCCAACA
CCACCTGCTTGATCACCATCATCTACGACCAATCCGGCAACGGCAACCAC
CTGACCCAAGCACCCCCGGGAGGCTTCGACGGCCCCGACGTCGACGGCTA
CGACAACCTCGCCAGCGCCATCGGCGCCCCCGTCACCCTCAATGGCCAAA
AGGCCTACGGCGTGTTCATGTCCCCCGGCACGGGCTACCGTAACAACGAA
GCCACCGGCACCGCCACCGGCGACGAACCCGAAGGCATGTACGCCGTCCT
GGACGGCACGCACTACAACGACGCCTGCTGCTTCGACTACGGCAACGCCG
AGACCAGCAGCACCGACACTGGCGCCGGCCACATGGAGGCCATCTACCTC
GGGAACAGCACCACCTGGGGCTACGGCGCCGGTGACGGGCCCTGGATCAT
GGTCGATATGGAGAACAACCTCTTCTCCGGTGCTGATGAGGGATATAACT
CCGGAGATCCCTCGATCAGCTACAGCTTTGTCACTGCCGCGGTCAAGGGC
GGGGCTGATAAGTGGGCTATTCGCGGTGGTAATGCTGCCTCTGGGTCCCT
CTCTACTTACTACAGCGGCGCTCGCCCGGATTACTCCGGCTATAACCCCA
TGAGCAAGGAGGGCGCTATCATCCTGGGTATCGGCGGTGACAACAGCAAC
GGCGCCCAGGGTACCTTCTACGAGGGTGTCATGACCTCCGGCTACCCGTC
GGACGATGTCGAGAACTCCGTCCAGGAGAACATCGTGGCTGCGAAATACG
TCTCCGGCTCGCTGGTCAGCGGCCCGTCGTTCACCTCCGGAGAGGTGGTC
TCGCTGCGTGTCACTACCCCCGGTTACACGACGCGGTATATTGCGCACAC
TGACACCACTGTGAACACGCAGGTCGTGGACGACGATAGTTCCACCACGC
TGAAGGAGGAGGCTAGCTGGACCGTGGTGACAGGTCTGGCTAATAGTCAG
TGCTTCTCGTTCGAGTCGGTTGATACCCCTGGTAGCTATATCCGGCATTA
CAACTTTGAGTTGCTGCTTAATGCCAACGATGGCACGAAGCAGTTCCATG
AGGATGCTACTTTCTGTCCTCAGGCGCCGTTGAATGGAGAAGGTACTTCG
TTGAGATCGTGGAGTTATCCGACGAGGTATTTCAGGCATTATGAGAATGT
CCTGTATGCTGCTAGTAATGGTGGTGTGCAGACGTTTGATTCCAAGACGT
CGTTTAATAATGATGTTAGCTTTGAGATTGAGACGGCGTTTGCTTCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046556alpha-L-arabinofuranosidase activity
Vocabulary: Biological Process
TermDefinition
GO:0046373L-arabinose metabolic process
GO:0031221arabinan metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_30860ATCC64974_30860Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_30860-T1.cdsATCC64974_30860-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_30860-T1.exon1ATCC64974_30860-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_30860-T1ATCC64974_30860-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:CBM42
NoteCAZy:GH54
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR036195
DBxrefInterPro:IPR007934
DBxrefInterPro:IPR015289
DBxrefPFAM:PF09206
DBxrefPFAM:PF05270
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1301756..1303255 -
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