You are here

Home

ATCC64974_40930-T1, ATCC64974_40930-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_40930-T1
Unique NameATCC64974_40930-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:628292..629147+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_40930-T1 ID=ATCC64974_40930-T1|Name=ATCC64974_40930-T1|organism=Aspergillus niger N402|type=mRNA|length=856bp|location=Sequence derived from alignment at OGUI01000006.1:628292..629147+ (Aspergillus niger N402)
ATGAACGGTGCCGACATTCTCATCAGTGCTATTGGACCCAATGACTTGCT
CCAGCAGAAGAAGCTACTTCAAGCCGCCAAGCTTACAGGTGTGAAAAGAG
TCATTCCCTGCGCTTTCACCACGGTAGCCCCTCCAAATGGCGCTATGCTA
CTTCGTGATGAGGTATAGAAACCATGATTCAAAAAATACCAATTTGATTA
ACCTCCAAGTAGAAAGAAGAAGTCTACAATGCCATCAAGTTCTTGGGTAT
TCCTTATACGGTGATCGATGTTGGCTTCTGGTATCAAATCTCATTTCCGA
CCCTTTCGTCTGGCAAAGTGGATTACGCCCAGATGGTTCCAGTGAAGACT
GTTCATGGGGACGGTACAGCTCCAAATATCCTTACCGACCTACGTGATGT
CGGGCGATTTGTTGCACGAATCATACTCGATGACCGAACTATTAACAAAT
ATGTCTACACGTCGGGGGATGTACTTTCCGAGAACGACATCTACCGTATC
GCGGAAGAGGTTTCTGGAGAGAAGCTGGAACCAGATCGTGTAAGTCAACT
TTATCTTAAGTGTATTACTATTTACTAAAAGCAAGTTGCTAGATATCACA
TGAAATTATCGAAGCCAATGTAGAGCAAGCTAAAGCTGCTCTCACTGAGG
ATCCTAGCGATCCCATGAAGCGCATCGGCGTTTTCATAGCCCAGTATGAG
CATAGCAAGTACGTGCGGGAGGATAACAGTCCTGGCTATGCCGCCTATCT
GGGTTATCTTGATGCCAGAGAGCTATACCCAGATTTCCAGCCAACATCCT
TTCGTGATTTCTTCGCGGAGGTGCTAGCTGGAAAGGGCAGGAAAGTGTAC
TCCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000006.1:628292..629147+

>ATCC64974_40930-T1 ID=ATCC64974_40930-T1|Name=ATCC64974_40930-T1|organism=Aspergillus niger N402|type=CDS|length=2259bp|location=Sequence derived from alignment at OGUI01000006.1:628292..629147+ (Aspergillus niger N402)
ATGAACGGTGCCGACATTCTCATCAGTGCTATTGGACCCAATGACTTGCT
CCAGCAGAAGAAGCTACTTCAAGCCGCCAAGCTTACAGGTGTGAAAAGAG
TCATTCCCTGCGCTTTCACCACGGTAGCCCCTCCAAATGGCGCTATGCTA
CTTCGTGATGAGAAAGAAGAAGTCTACAATGCCATCAAGTTCTTGGGTAT
TCCTTATACGGTGATCGATGTTGGCTTCTGGTATCAAATCTCATTTCCGA
CCCTTTCGTCTGGCAAAGTGGATTACGCCCAGATGGTTCCAGTGAAGACT
GTTCATGGGGACGGTACAGCTCCAAATATCCTTACCGACCTACGTGATGT
CGGGCGATTTGTTGCACGAATCATACTCGATGACCGAACTATTAACAAAT
ATGTCTACACGTCGGGGGATGTACTTTCCGAGAACGACATCTACCGTATC
GCGGAAGAGGTTTCTGGAGAGAAGCTGGAACCAGATCGTATATCACATGA
AATTATCGAAGCCAATGTAGAGCAAGCTAAAGCTGCTCTCACTGAGGATC
CTAGCGATCCCATGAAGCGCATCGGCGTTTTCATAGCCCAGTATGAGCAT
AGCAAGTACGTGCGGGAGGATAACAGTCCTGGCTATGCCGCCTATCTGGG
TTATCTTGATGCCAGAGAGCTATACCCAGATTTCCAGCCAACATCCTTTC
GTGATTTCTTCGCGGAGGTGCTAGCTGGAAAGGGCAGGAAAGTGTACTCC
TAGATGAACGGTGCCGACATTCTCATCAGTGCTATTGGACCCAATGACTT
GCTCCAGCAGAAGAAGCTACTTCAAGCCGCCAAGCTTACAGGTGTGAAAA
GAGTCATTCCCTGCGCTTTCACCACGGTAGCCCCTCCAAATGGCGCTATG
CTACTTCGTGATGAGAAAGAAGAAGTCTACAATGCCATCAAGTTCTTGGG
TATTCCTTATACGGTGATCGATGTTGGCTTCTGGTATCAAATCTCATTTC
CGACCCTTTCGTCTGGCAAAGTGGATTACGCCCAGATGGTTCCAGTGAAG
ACTGTTCATGGGGACGGTACAGCTCCAAATATCCTTACCGACCTACGTGA
TGTCGGGCGATTTGTTGCACGAATCATACTCGATGACCGAACTATTAACA
AATATGTCTACACGTCGGGGGATGTACTTTCCGAGAACGACATCTACCGT
ATCGCGGAAGAGGTTTCTGGAGAGAAGCTGGAACCAGATCGTATATCACA
TGAAATTATCGAAGCCAATGTAGAGCAAGCTAAAGCTGCTCTCACTGAGG
ATCCTAGCGATCCCATGAAGCGCATCGGCGTTTTCATAGCCCAGTATGAG
CATAGCAAGTACGTGCGGGAGGATAACAGTCCTGGCTATGCCGCCTATCT
GGGTTATCTTGATGCCAGAGAGCTATACCCAGATTTCCAGCCAACATCCT
TTCGTGATTTCTTCGCGGAGGTGCTAGCTGGAAAGGGCAGGAAAGTGTAC
TCCTAGATGAACGGTGCCGACATTCTCATCAGTGCTATTGGACCCAATGA
CTTGCTCCAGCAGAAGAAGCTACTTCAAGCCGCCAAGCTTACAGGTGTGA
AAAGAGTCATTCCCTGCGCTTTCACCACGGTAGCCCCTCCAAATGGCGCT
ATGCTACTTCGTGATGAGAAAGAAGAAGTCTACAATGCCATCAAGTTCTT
GGGTATTCCTTATACGGTGATCGATGTTGGCTTCTGGTATCAAATCTCAT
TTCCGACCCTTTCGTCTGGCAAAGTGGATTACGCCCAGATGGTTCCAGTG
AAGACTGTTCATGGGGACGGTACAGCTCCAAATATCCTTACCGACCTACG
TGATGTCGGGCGATTTGTTGCACGAATCATACTCGATGACCGAACTATTA
ACAAATATGTCTACACGTCGGGGGATGTACTTTCCGAGAACGACATCTAC
CGTATCGCGGAAGAGGTTTCTGGAGAGAAGCTGGAACCAGATCGTATATC
ACATGAAATTATCGAAGCCAATGTAGAGCAAGCTAAAGCTGCTCTCACTG
AGGATCCTAGCGATCCCATGAAGCGCATCGGCGTTTTCATAGCCCAGTAT
GAGCATAGCAAGTACGTGCGGGAGGATAACAGTCCTGGCTATGCCGCCTA
TCTGGGTTATCTTGATGCCAGAGAGCTATACCCAGATTTCCAGCCAACAT
CCTTTCGTGATTTCTTCGCGGAGGTGCTAGCTGGAAAGGGCAGGAAAGTG
TACTCCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_40930ATCC64974_40930Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40930-T1.exon1ATCC64974_40930-T1.exon1Aspergillus niger N402exon
ATCC64974_40930-T1.exon2ATCC64974_40930-T1.exon2Aspergillus niger N402exon
ATCC64974_40930-T1.exon3ATCC64974_40930-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40930-T1.cdsATCC64974_40930-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_40930-T1ATCC64974_40930-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:628292..629147 +
Powered by Drupal