You are here

Home

ATCC64974_55900-T1, ATCC64974_55900-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_55900-T1
Unique NameATCC64974_55900-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4166533..4167582+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_55900-T1 ID=ATCC64974_55900-T1|Name=ATCC64974_55900-T1|organism=Aspergillus niger N402|type=mRNA|length=1050bp|location=Sequence derived from alignment at OGUI01000007.1:4166533..4167582+ (Aspergillus niger N402)
ATGATTCTTCCGGATTCGCAGTATGCGTTGGTCGTGCAGGGGCCCGGTTC
ATTGCAATTGCTCAGCCACGCCCCTGTTCCCTCGCTTGGAGCAGATCAGG
TCCTGATCGAGGTGAAGGGGGTGGCACTAAACCCCTCAGACTGGAAGATG
CTTGATACTGCAGCAGCAAACCCGGGCACCATCAGTGGAGGGGACTTTGC
TGGGGTTGTCGTTGCGTGTGGGAGGGAGGTGACCGAGGCGGCGATTGGGG
ATCGTCTGTGTGGATTCGTTTTTGGAGCAGCTTCATCCGGCGCATTTGCC
CAGTTCGTCATGGTCCATCCCAGTCTCTGTTTTCGAATCCCACCCTCCAT
GTCGTTTGAGGCCGCCGCCTCCCTTGGACTAGGGCTAATGACGGGGGGAT
TGATGCTGCAGTCTCTCCACCTCAATCCGCTACGAGCTGCAGAGTCCACG
CCTGATCATTGGGTGTTGGTCTATGGCGGCTCAACGGCAACAGGAACCCT
CGCCATCCAGCTCCTACGCTATCATGGCTATCGCGTCATCACCACTTGTT
CTCCTCGGAATTTTGAACTAGTGCGACGGGTGGGGGCAGTAGCTACGTTT
GACTATACCTCCCCCACCTGCAAGGAGGACATTCGGGCTTACACCGGTGG
CACTCTCATGCATGTGATGGATTGTATTGCGGATTCACGCGCTACTACAA
TTTGTTACGGGGCCATCGGCGAAGCAGGCGGGCGGTACTGTGCCTTGAAT
CAATTTCCCGCGCAATTGCACCGCCGTCGTGCCTCTGTCTCTCCGGAGTG
GATCCATAGTGCGACCATCTTCGGAGGCGATGTTCAGCTGGCAGGCTCCT
ACTACCGGACAGCACGACCGGAGGATCGTGAATTTGCCATAGAATGGGCG
CGATATTGTACCGAGCTTCTAGCCCAGGGAAAACTACAACCGCATCCACT
TCAGGTGCAGCAGGGAGGTCTTGCGCGTGTGGTCGAGGACTTGGTCCTTC
TACGCAATCAGCAAATCACGGGCAAGAAGCTGGTATATCCACTGTACTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000007.1:4166533..4167582+

>ATCC64974_55900-T1 ID=ATCC64974_55900-T1|Name=ATCC64974_55900-T1|organism=Aspergillus niger N402|type=CDS|length=1050bp|location=Sequence derived from alignment at OGUI01000007.1:4166533..4167582+ (Aspergillus niger N402)
ATGATTCTTCCGGATTCGCAGTATGCGTTGGTCGTGCAGGGGCCCGGTTC
ATTGCAATTGCTCAGCCACGCCCCTGTTCCCTCGCTTGGAGCAGATCAGG
TCCTGATCGAGGTGAAGGGGGTGGCACTAAACCCCTCAGACTGGAAGATG
CTTGATACTGCAGCAGCAAACCCGGGCACCATCAGTGGAGGGGACTTTGC
TGGGGTTGTCGTTGCGTGTGGGAGGGAGGTGACCGAGGCGGCGATTGGGG
ATCGTCTGTGTGGATTCGTTTTTGGAGCAGCTTCATCCGGCGCATTTGCC
CAGTTCGTCATGGTCCATCCCAGTCTCTGTTTTCGAATCCCACCCTCCAT
GTCGTTTGAGGCCGCCGCCTCCCTTGGACTAGGGCTAATGACGGGGGGAT
TGATGCTGCAGTCTCTCCACCTCAATCCGCTACGAGCTGCAGAGTCCACG
CCTGATCATTGGGTGTTGGTCTATGGCGGCTCAACGGCAACAGGAACCCT
CGCCATCCAGCTCCTACGCTATCATGGCTATCGCGTCATCACCACTTGTT
CTCCTCGGAATTTTGAACTAGTGCGACGGGTGGGGGCAGTAGCTACGTTT
GACTATACCTCCCCCACCTGCAAGGAGGACATTCGGGCTTACACCGGTGG
CACTCTCATGCATGTGATGGATTGTATTGCGGATTCACGCGCTACTACAA
TTTGTTACGGGGCCATCGGCGAAGCAGGCGGGCGGTACTGTGCCTTGAAT
CAATTTCCCGCGCAATTGCACCGCCGTCGTGCCTCTGTCTCTCCGGAGTG
GATCCATAGTGCGACCATCTTCGGAGGCGATGTTCAGCTGGCAGGCTCCT
ACTACCGGACAGCACGACCGGAGGATCGTGAATTTGCCATAGAATGGGCG
CGATATTGTACCGAGCTTCTAGCCCAGGGAAAACTACAACCGCATCCACT
TCAGGTGCAGCAGGGAGGTCTTGCGCGTGTGGTCGAGGACTTGGTCCTTC
TACGCAATCAGCAAATCACGGGCAAGAAGCTGGTATATCCACTGTACTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_55900ATCC64974_55900Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55900-T1.exon1ATCC64974_55900-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55900-T1.cdsATCC64974_55900-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55900-T1ATCC64974_55900-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000071.9
NoteantiSMASH:Cluster_10000071.8
NoteEggNog:ENOG41
NoteSMCOG1028:crotonyl-CoA reductase / alcohol dehydrogenase
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR013154
DBxrefInterPro:IPR020843
DBxrefPFAM:PF08240
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4166533..4167582 +
Powered by Drupal