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ATCC64974_57160-T1, ATCC64974_57160-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_57160-T1
Unique NameATCC64974_57160-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:4560587..4563091-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_57160-T1 ID=ATCC64974_57160-T1|Name=ATCC64974_57160-T1|organism=Aspergillus niger N402|type=mRNA|length=2505bp|location=Sequence derived from alignment at OGUI01000007.1:4560587..4563091- (Aspergillus niger N402)
ATGTCCAGTCCAGCTAAAAAACGCAAGAGGGATGATCCCGGATCTACACC
CCAGCGCTCCCGGAGCATAGCGTCGTTCTTCCAGGGCCAGGCAGCCAAGC
AAGCCGAGAAGACGCAGCAGGCATTTGATGCTGTGCCCGAAGTCCCCACG
GAACAAACTCTGTCAGACGAGGCGCTTGCTCGTAAGCTGCAGGCCGAATG
GGATCAGGAGCATGCGCTTTCAAATCCGCAAGTCGACACGCCTAGTGATG
AGCCTATTTCGGCACAATCAATCACAGGCGATAACGATCGGGAACCGGCC
AAAGTGCAGAAGAAAGGCGTCCTGTCACTGCAGTCATCCACAGGCACGGA
GGACACTGTATCTCTTGCAGTTCCTTTCGATCAGAGTCCTATCACGTTCG
ATGCCTCCAAATATGCGCACGAGCTGCAAGGACACTGGGCTTCGGAAGGT
GGCGACGCTTCATACGCCCTCCTGACCAGAGCTTTTGTGCTCGCAAATGC
CACAACCAGTCGCATCAAGATCGTCGATACATTGGTCAATTTTCTCCGCG
TGTTGATTGAGGCCGACCCGTCCAGTGTGCTTCCCGCTGTATGGCTTGCG
ACTAATTCAATATCCCCACCATACGACGAATTGGAGCTTGGACTTGGCGG
GTCCTCGATATCAAAAGCGCTCAAAAAGGTGTACGGACTGAACAGCCAAG
GCCTTAAAACTCTGTACGACAAGCACGGCGATGCTGGCGACGTAGCATTC
GAGGCCAAGAAGAGACAGTCTTTTACATTGATGAAGCCTAAACCGCTTCG
AATCAAAGGTGTCTACCAGTCGCTCAAGAAGATAGCTATGAGCAAAGGGA
GTGGAAGCCAGGAGACAAAGCAAAGGATCGTCGAGAAACTTCTGCAAGAT
GCCCGTGGTGCGGAAGAGAGTCGGTACATTGTTAGAACTCTGGTCCAAAA
TCTACGCATCGGCGCTGTCAAGACTACCATGCTCATTGCACTGGCTAGAG
CATTCCTTTACTCCAAACCAGAGGGAGCGGGATTCTCAATCTACTCTCAG
CGGGAAATGGCACAGATGAAGAAAGAGGAGCTAGCTGAGATCTACGGCAA
CGCAGAAGAGATCGTTAAGGCGTCGTATGCGAGACACCCGGACTACGATG
ACCTCGTCCCCTGCTTGCTTGAAGTCGGAGCTACAGATGAACTTCTTGTC
CGCTGTGGTCTTCAGATACATATTCCGTTGAGACCCATGCTAGGCAGCAT
CACGCGGGATCTGTCAGATATGCTAACGAAGCTGCAAGGGCGCGATTTCA
GCTGTGAATACAAATATGACGGGCAGCGTGCGCAAGTGCATTGCGATGTA
CAAGGCAAAGTATCAATATTCTCCCGTCACTTGGAGAATATGACGGAGAA
ATACCCAGACCTGGTGTCTCTTGTCCCAGAGATAAGAGGAGAAGGCGTAT
CAAGCTTCATCCTCGAAGGGGAGGTAGTTGCCGTTGATCAAGAAACGGGG
GAACTACAGGCTTTTCAGATCCTGACCAATCGCGCGAAGAAGAACGTCGA
TATCGGAGCAATCAAAGTCAACGTGTGTCTGTTTGCCTTTGACCTAATGT
ACCTGAACGGCCAACCACTACTCGACCGATCATTCCGCGAGCGAAGAGAG
CTGCTACGGAGCTTATTCGTGGAAATCCCCAAACGGTTCACCTGGGTGAA
GAGTCTCGACGCCACCTCAGCCGACTCCGAAGCAGTATTAGAGTTTTTCA
AGAGTGCCACAGACACCAAATGCGAAGGCATCATGGTCAAAGTGCTCGAC
AACATGCCAAAACCTGATCTCGAAGGAATTGACACACCAGCTGTCGACAC
TTCCAACGGAACACCCACCACACCCGGCCAACCAACCACCAACATGACAG
ACAACAAACCCTCCAAAAACACCCGCCGAAAAGCCCTCCTCTCCACCTAC
GAGCCTGACAAGCGCCTCGAATCCTGGCTCAAAGTCAAAAAAGACTACAG
CACTTCATCAGAAACTCTGGACCTAATCCCCATAGCCGGCTGGCACGGCC
AAGGCCGCAAAGCGAAATGGTGGTCACCGATCCTCCTTGCGGTTCGAAAC
CCAGAAACCGGAAGTCTCGAAGCCGTAACGAAGTGCATGTCGGGCTTCAC
GGACAAATTCTACCAAGCCAACAAGGACAAGTACGCGGAGGGTACCCCCA
ACGTCATCTCCCGCCCCAGCTACGTCGAATACTACGGCGAGCCGGACGTG
TGGTTCGAACCGCAGGAAGTTTGGGAGATGGCCTTCGCAGATATCACGCT
GAGTCCTACGTACACGGCCGCTCTGGGATTAGTTAGCGATGAACGGGGTC
TGAGTTTGCGGTTTCCTCGATTTCTCAAAGTCAGAGAGGATAAATCGATC
GATGAGGCGACCACGTCTGACTATCTGGCTTATTTGTGGAGGAAACAGTC
GGAACGGACGAAGCAGGAGGGGGGTGAGCCATTGGCTGAGGAGCAGGAAG
AGTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:4560587..4563091-

>ATCC64974_57160-T1 ID=ATCC64974_57160-T1|Name=ATCC64974_57160-T1|organism=Aspergillus niger N402|type=CDS|length=2505bp|location=Sequence derived from alignment at OGUI01000007.1:4560587..4563091- (Aspergillus niger N402)
ATGTCCAGTCCAGCTAAAAAACGCAAGAGGGATGATCCCGGATCTACACC
CCAGCGCTCCCGGAGCATAGCGTCGTTCTTCCAGGGCCAGGCAGCCAAGC
AAGCCGAGAAGACGCAGCAGGCATTTGATGCTGTGCCCGAAGTCCCCACG
GAACAAACTCTGTCAGACGAGGCGCTTGCTCGTAAGCTGCAGGCCGAATG
GGATCAGGAGCATGCGCTTTCAAATCCGCAAGTCGACACGCCTAGTGATG
AGCCTATTTCGGCACAATCAATCACAGGCGATAACGATCGGGAACCGGCC
AAAGTGCAGAAGAAAGGCGTCCTGTCACTGCAGTCATCCACAGGCACGGA
GGACACTGTATCTCTTGCAGTTCCTTTCGATCAGAGTCCTATCACGTTCG
ATGCCTCCAAATATGCGCACGAGCTGCAAGGACACTGGGCTTCGGAAGGT
GGCGACGCTTCATACGCCCTCCTGACCAGAGCTTTTGTGCTCGCAAATGC
CACAACCAGTCGCATCAAGATCGTCGATACATTGGTCAATTTTCTCCGCG
TGTTGATTGAGGCCGACCCGTCCAGTGTGCTTCCCGCTGTATGGCTTGCG
ACTAATTCAATATCCCCACCATACGACGAATTGGAGCTTGGACTTGGCGG
GTCCTCGATATCAAAAGCGCTCAAAAAGGTGTACGGACTGAACAGCCAAG
GCCTTAAAACTCTGTACGACAAGCACGGCGATGCTGGCGACGTAGCATTC
GAGGCCAAGAAGAGACAGTCTTTTACATTGATGAAGCCTAAACCGCTTCG
AATCAAAGGTGTCTACCAGTCGCTCAAGAAGATAGCTATGAGCAAAGGGA
GTGGAAGCCAGGAGACAAAGCAAAGGATCGTCGAGAAACTTCTGCAAGAT
GCCCGTGGTGCGGAAGAGAGTCGGTACATTGTTAGAACTCTGGTCCAAAA
TCTACGCATCGGCGCTGTCAAGACTACCATGCTCATTGCACTGGCTAGAG
CATTCCTTTACTCCAAACCAGAGGGAGCGGGATTCTCAATCTACTCTCAG
CGGGAAATGGCACAGATGAAGAAAGAGGAGCTAGCTGAGATCTACGGCAA
CGCAGAAGAGATCGTTAAGGCGTCGTATGCGAGACACCCGGACTACGATG
ACCTCGTCCCCTGCTTGCTTGAAGTCGGAGCTACAGATGAACTTCTTGTC
CGCTGTGGTCTTCAGATACATATTCCGTTGAGACCCATGCTAGGCAGCAT
CACGCGGGATCTGTCAGATATGCTAACGAAGCTGCAAGGGCGCGATTTCA
GCTGTGAATACAAATATGACGGGCAGCGTGCGCAAGTGCATTGCGATGTA
CAAGGCAAAGTATCAATATTCTCCCGTCACTTGGAGAATATGACGGAGAA
ATACCCAGACCTGGTGTCTCTTGTCCCAGAGATAAGAGGAGAAGGCGTAT
CAAGCTTCATCCTCGAAGGGGAGGTAGTTGCCGTTGATCAAGAAACGGGG
GAACTACAGGCTTTTCAGATCCTGACCAATCGCGCGAAGAAGAACGTCGA
TATCGGAGCAATCAAAGTCAACGTGTGTCTGTTTGCCTTTGACCTAATGT
ACCTGAACGGCCAACCACTACTCGACCGATCATTCCGCGAGCGAAGAGAG
CTGCTACGGAGCTTATTCGTGGAAATCCCCAAACGGTTCACCTGGGTGAA
GAGTCTCGACGCCACCTCAGCCGACTCCGAAGCAGTATTAGAGTTTTTCA
AGAGTGCCACAGACACCAAATGCGAAGGCATCATGGTCAAAGTGCTCGAC
AACATGCCAAAACCTGATCTCGAAGGAATTGACACACCAGCTGTCGACAC
TTCCAACGGAACACCCACCACACCCGGCCAACCAACCACCAACATGACAG
ACAACAAACCCTCCAAAAACACCCGCCGAAAAGCCCTCCTCTCCACCTAC
GAGCCTGACAAGCGCCTCGAATCCTGGCTCAAAGTCAAAAAAGACTACAG
CACTTCATCAGAAACTCTGGACCTAATCCCCATAGCCGGCTGGCACGGCC
AAGGCCGCAAAGCGAAATGGTGGTCACCGATCCTCCTTGCGGTTCGAAAC
CCAGAAACCGGAAGTCTCGAAGCCGTAACGAAGTGCATGTCGGGCTTCAC
GGACAAATTCTACCAAGCCAACAAGGACAAGTACGCGGAGGGTACCCCCA
ACGTCATCTCCCGCCCCAGCTACGTCGAATACTACGGCGAGCCGGACGTG
TGGTTCGAACCGCAGGAAGTTTGGGAGATGGCCTTCGCAGATATCACGCT
GAGTCCTACGTACACGGCCGCTCTGGGATTAGTTAGCGATGAACGGGGTC
TGAGTTTGCGGTTTCCTCGATTTCTCAAAGTCAGAGAGGATAAATCGATC
GATGAGGCGACCACGTCTGACTATCTGGCTTATTTGTGGAGGAAACAGTC
GGAACGGACGAAGCAGGAGGGGGGTGAGCCATTGGCTGAGGAGCAGGAAG
AGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0051103DNA ligation involved in DNA repair
GO:0071897DNA biosynthetic process
GO:0006310DNA recombination
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0003909DNA ligase activity
GO:0005524ATP binding
GO:0003677DNA binding
GO:0003910DNA ligase (ATP) activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_57160ATCC64974_57160Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57160-T1.cdsATCC64974_57160-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57160-T1.exon1ATCC64974_57160-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_57160-T1ATCC64974_57160-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR016059
DBxrefInterPro:IPR000977
DBxrefInterPro:IPR036599
DBxrefInterPro:IPR012310
DBxrefInterPro:IPR012309
DBxrefInterPro:IPR012308
DBxrefPFAM:PF04675
DBxrefPFAM:PF01068
DBxrefPFAM:PF04679
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:4560587..4563091 -
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