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ATCC64974_62300-T1, ATCC64974_62300-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_62300-T1
Unique NameATCC64974_62300-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000008.1:1085053..1086104-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_62300-T1 ID=ATCC64974_62300-T1|Name=ATCC64974_62300-T1|organism=Aspergillus niger N402|type=mRNA|length=1052bp|location=Sequence derived from alignment at OGUI01000008.1:1085053..1086104- (Aspergillus niger N402)
ATGGTCACAGCAACAAGACAGCGGAAATTCCCCGCTGAGCAACAACAATC
CTCGACAGAGCCCGAAGTCAATGGATCGAATGGAAAGCGCAAGTCCGAAC
CCGTGGGCGCTGAACCCACTGAGACTCAGAGCAAGAACAAGCGGCGGAAG
AGAAGCAGTCTAGAGGCGACGACACAAGAATCGGAGAGCAAACCTTCGAG
TAACAAGAAGTCGAAGAAGATGACGGAACCGACTGAGGAGCCTGAGGAAC
AGCAAGAGGAGGAAAAGAAACCTTCAGCAGCGCCGGCGGCGAAGAAGCAC
TTCCGCTTTGATAGCGAGGAGCCGGAAATCCCGGAGGTTGCGGCTGTTGA
GGATACCACGGAGGCGCAACAGGATCAGGATGATGAGAGCAGTGATGATG
ATGAGGCCCCAGAGACGGTCGACAACTCTGCACAGCTGTCGAAGATGAGG
ATGGAAGCTAAGAAGCAGGAACGGGCTAGGCAAATGTGAGTGATGCGCGC
GATTTCAGCCTTGGTGCTGTTTCTGGATACGATTCTAACGTTTTCTACAG
AGAGGAGCAATTGAAGCGGGACAAACGGAAACAGTTGGATGAGTTGCGCA
AATCCCAGGCGAAGTTGGCGAAGAAAAAGGAAGCAAAGGCCGAAGATCTG
TTGTCGGAAAGCACAGAGACCCTCCAAGGAACTACTACGCAAGATGCACG
ACGCTCGGCCCTCCCTGCTCTTCTTCCCGATGATATCCTCAATGCGGCCC
CCGATGTCCGGCCCCCGACACCTCCCGCGGAAGAGAGGACTATCATGCAG
AAGAAGCCCAACAAGCTACGATTCTTGGACAAGAAGGAGAAGCCGCCGAA
GGATGCGCGGGTGGGAGATGTTACTATCCGGGTGTTGGATGATGGTGTAT
CCAAAAAGCCCTCAAAGACGGTTCTGCCGCCTAAGGCCTCAAAAACCGGG
CGCAATGCCAAGCAGAATTGGCTGAACAAATCCCGCAACACAGGCGCTTT
GAATGGGTTGAGAAGGACGACTGGCGGTTCCTCGGGATTCGTGCGCAAAT
AG
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Coding sequence (CDS) from alignment at OGUI01000008.1:1085053..1086104-

>ATCC64974_62300-T1 ID=ATCC64974_62300-T1|Name=ATCC64974_62300-T1|organism=Aspergillus niger N402|type=CDS|length=1974bp|location=Sequence derived from alignment at OGUI01000008.1:1085053..1086104- (Aspergillus niger N402)
AGAGGAGCAATTGAAGCGGGACAAACGGAAACAGTTGGATGAGTTGCGCA
AATCCCAGGCGAAGTTGGCGAAGAAAAAGGAAGCAAAGGCCGAAGATCTG
TTGTCGGAAAGCACAGAGACCCTCCAAGGAACTACTACGCAAGATGCACG
ACGCTCGGCCCTCCCTGCTCTTCTTCCCGATGATATCCTCAATGCGGCCC
CCGATGTCCGGCCCCCGACACCTCCCGCGGAAGAGAGGACTATCATGCAG
AAGAAGCCCAACAAGCTACGATTCTTGGACAAGAAGGAGAAGCCGCCGAA
GGATGCGCGGGTGGGAGATGTTACTATCCGGGTGTTGGATGATGGTGTAT
CCAAAAAGCCCTCAAAGACGGTTCTGCCGCCTAAGGCCTCAAAAACCGGG
CGCAATGCCAAGCAGAATTGGCTGAACAAATCCCGCAACACAGGCGCTTT
GAATGGGTTGAGAAGGACGACTGGCGGTTCCTCGGGATTCGTGCGCAAAT
AGATGGTCACAGCAACAAGACAGCGGAAATTCCCCGCTGAGCAACAACAA
TCCTCGACAGAGCCCGAAGTCAATGGATCGAATGGAAAGCGCAAGTCCGA
ACCCGTGGGCGCTGAACCCACTGAGACTCAGAGCAAGAACAAGCGGCGGA
AGAGAAGCAGTCTAGAGGCGACGACACAAGAATCGGAGAGCAAACCTTCG
AGTAACAAGAAGTCGAAGAAGATGACGGAACCGACTGAGGAGCCTGAGGA
ACAGCAAGAGGAGGAAAAGAAACCTTCAGCAGCGCCGGCGGCGAAGAAGC
ACTTCCGCTTTGATAGCGAGGAGCCGGAAATCCCGGAGGTTGCGGCTGTT
GAGGATACCACGGAGGCGCAACAGGATCAGGATGATGAGAGCAGTGATGA
TGATGAGGCCCCAGAGACGGTCGACAACTCTGCACAGCTGTCGAAGATGA
GGATGGAAGCTAAGAAGCAGGAACGGGCTAGGCAAATAGAGGAGCAATTG
AAGCGGGACAAACGGAAACAGTTGGATGAGTTGCGCAAATCCCAGGCGAA
GTTGGCGAAGAAAAAGGAAGCAAAGGCCGAAGATCTGTTGTCGGAAAGCA
CAGAGACCCTCCAAGGAACTACTACGCAAGATGCACGACGCTCGGCCCTC
CCTGCTCTTCTTCCCGATGATATCCTCAATGCGGCCCCCGATGTCCGGCC
CCCGACACCTCCCGCGGAAGAGAGGACTATCATGCAGAAGAAGCCCAACA
AGCTACGATTCTTGGACAAGAAGGAGAAGCCGCCGAAGGATGCGCGGGTG
GGAGATGTTACTATCCGGGTGTTGGATGATGGTGTATCCAAAAAGCCCTC
AAAGACGGTTCTGCCGCCTAAGGCCTCAAAAACCGGGCGCAATGCCAAGC
AGAATTGGCTGAACAAATCCCGCAACACAGGCGCTTTGAATGGGTTGAGA
AGGACGACTGGCGGTTCCTCGGGATTCGTGCGCAAATAGATGGTCACAGC
AACAAGACAGCGGAAATTCCCCGCTGAGCAACAACAATCCTCGACAGAGC
CCGAAGTCAATGGATCGAATGGAAAGCGCAAGTCCGAACCCGTGGGCGCT
GAACCCACTGAGACTCAGAGCAAGAACAAGCGGCGGAAGAGAAGCAGTCT
AGAGGCGACGACACAAGAATCGGAGAGCAAACCTTCGAGTAACAAGAAGT
CGAAGAAGATGACGGAACCGACTGAGGAGCCTGAGGAACAGCAAGAGGAG
GAAAAGAAACCTTCAGCAGCGCCGGCGGCGAAGAAGCACTTCCGCTTTGA
TAGCGAGGAGCCGGAAATCCCGGAGGTTGCGGCTGTTGAGGATACCACGG
AGGCGCAACAGGATCAGGATGATGAGAGCAGTGATGATGATGAGGCCCCA
GAGACGGTCGACAACTCTGCACAGCTGTCGAAGATGAGGATGGAAGCTAA
GAAGCAGGAACGGGCTAGGCAAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0030515snoRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_62300ATCC64974_62300Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_62300-T1ATCC64974_62300-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_62300-T1.cdsATCC64974_62300-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_62300-T1.exon2ATCC64974_62300-T1.exon2Aspergillus niger N402exon
ATCC64974_62300-T1.exon1ATCC64974_62300-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR013268
DBxrefPFAM:PF08297
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000008.1supercontigOGUI01000008.1:1085053..1086104 -
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