You are here

Home

ATCC64974_64430-T1, ATCC64974_64430-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_64430-T1
Unique NameATCC64974_64430-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:399551..400201-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_64430-T1 ID=ATCC64974_64430-T1|Name=ATCC64974_64430-T1|organism=Aspergillus niger N402|type=mRNA|length=651bp|location=Sequence derived from alignment at OGUI01000010.1:399551..400201- (Aspergillus niger N402)
ATGAAGGACCAATTTGGTGTGATTTCTAACTTCACTAGATATGGCTGTCT
TTATAATCAGAAAGACACACTTCCTGGATCTCAACCTGCAATAGTTGAAG
GAGACAACTACCCACTAGAAGTCAGGCAGAAGATCGCTGAGAGGTTTTCC
ATCGGCCCGGTTGTTGATACAGCCTTCTGGAGCAATGAGCGAGGAAATAT
GAATATTGATCGTGGACCATGTTCGTCTCTCTCACCAGTTTCCTATCTCT
AATCTAACCTACTAATCAAAACAGGGACTTCTGCAATCGACTACATACGT
GCTCTCGCCGATCGAGTAATATCCTGGATCAAGGAACACGCAATGCCACG
CTCACCAGATGATCCGCTATTCAGTTCCTACAGCCAAAACGATCCTGCTG
AACACATCTCCCTTCTCCAAAAATACCTAACCGTCACTCCTCACCTAATC
CCACAGGATAAAGACATCCTAGGGTCATTCTTATGGCACACCGACCTCCG
CACTCCTAACATATTCGTCGACAACAGCGGCCACATCACAAGCATAATAG
ACTGGCAAAGCACATGGGCTGGTCCATTGTTCCTCGAAGGCCGCCATCCG
CATTTCCTCGACTACACCGGAGACTTGCTACTCAAACCACCTAAGGGATA
A
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:399551..400201-

>ATCC64974_64430-T1 ID=ATCC64974_64430-T1|Name=ATCC64974_64430-T1|organism=Aspergillus niger N402|type=CDS|length=1194bp|location=Sequence derived from alignment at OGUI01000010.1:399551..400201- (Aspergillus niger N402)
GGACTTCTGCAATCGACTACATACGTGCTCTCGCCGATCGAGTAATATCC
TGGATCAAGGAACACGCAATGCCACGCTCACCAGATGATCCGCTATTCAG
TTCCTACAGCCAAAACGATCCTGCTGAACACATCTCCCTTCTCCAAAAAT
ACCTAACCGTCACTCCTCACCTAATCCCACAGGATAAAGACATCCTAGGG
TCATTCTTATGGCACACCGACCTCCGCACTCCTAACATATTCGTCGACAA
CAGCGGCCACATCACAAGCATAATAGACTGGCAAAGCACATGGGCTGGTC
CATTGTTCCTCGAAGGCCGCCATCCGCATTTCCTCGACTACACCGGAGAC
TTGCTACTCAAACCACCTAAGGGATAAATGAAGGACCAATTTGGTGTGAT
TTCTAACTTCACTAGATATGGCTGTCTTTATAATCAGAAAGACACACTTC
CTGGATCTCAACCTGCAATAGTTGAAGGAGACAACTACCCACTAGAAGTC
AGGCAGAAGATCGCTGAGAGGTTTTCCATCGGCCCGGTTGTTGATACAGC
CTTCTGGAGCAATGAGCGAGGAAATATGAATATTGATCGTGGACCATGGA
CTTCTGCAATCGACTACATACGTGCTCTCGCCGATCGAGTAATATCCTGG
ATCAAGGAACACGCAATGCCACGCTCACCAGATGATCCGCTATTCAGTTC
CTACAGCCAAAACGATCCTGCTGAACACATCTCCCTTCTCCAAAAATACC
TAACCGTCACTCCTCACCTAATCCCACAGGATAAAGACATCCTAGGGTCA
TTCTTATGGCACACCGACCTCCGCACTCCTAACATATTCGTCGACAACAG
CGGCCACATCACAAGCATAATAGACTGGCAAAGCACATGGGCTGGTCCAT
TGTTCCTCGAAGGCCGCCATCCGCATTTCCTCGACTACACCGGAGACTTG
CTACTCAAACCACCTAAGGGATAAATGAAGGACCAATTTGGTGTGATTTC
TAACTTCACTAGATATGGCTGTCTTTATAATCAGAAAGACACACTTCCTG
GATCTCAACCTGCAATAGTTGAAGGAGACAACTACCCACTAGAAGTCAGG
CAGAAGATCGCTGAGAGGTTTTCCATCGGCCCGGTTGTTGATACAGCCTT
CTGGAGCAATGAGCGAGGAAATATGAATATTGATCGTGGACCAT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_64430ATCC64974_64430Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_64430-T1ATCC64974_64430-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_64430-T1.cdsATCC64974_64430-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_64430-T1.exon2ATCC64974_64430-T1.exon2Aspergillus niger N402exon
ATCC64974_64430-T1.exon1ATCC64974_64430-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011009
DBxrefInterPro:IPR002575
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:399551..400201 -
Powered by Drupal