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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:3902454..3903257+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_108100-T1 ID=ATCC64974_108100-T1|Name=ATCC64974_108100-T1|organism=Aspergillus niger N402|type=mRNA|length=804bp|location=Sequence derived from alignment at OGUI01000017.1:3902454..3903257+ (Aspergillus niger N402)
ATGCTCCTCCCTCTACTCGTCTTACTCCTCATCCTCCTAACCCTCCTACC
TCTATACATAATCTACCGGCCACCGCACGCCCTAATCCGCTCCCTGGCGA
ACAAATACCCAGATACATTGTGGGAGATACCACTCCCCACCACCAAGGAC
ACAGAAGGGAAAGGAACGGAAAAAGTAATCGCCCTAACCATCGACGACGC
CCCCAGCACGTACACGCTCGACATCCTACACCTTCTCCAACAACATGACG
CGCGGGCGACATTCTTCCTCATCGGTTCGCAGATCCCCGGCCGGGAGGGG
ATTCTACATACGCTCGTGAAGAGCGGGATGGAGCTGGGTAATCATGCGAT
GCACGATGAGCCGTCTGTTTCGATTGGGGAGGAGGTGCTGGAGAGGGAGA
TGTTGGAGGTGGATGGGGTGATTGACAGGGTTTATGAGGAATCTGGGGTG
AAGCGGCCACGGTATGAGGACGGGGCTGTGAAGAAGTGGTTCCGGCCTGG
ATCGGGGTTCTTTAATGGGTGGATGAGGGGGCTTGTGCAGAGACTCGGGT
ATAAGATTGTGTTGGGGAGTGTGTATCCGCATGATGCGCAGATCGGGTGG
GCGGGGGTGAATGCGTGGCATGTGAGGAGTATGGTTAGGGAGGGGAGTAT
TGTTGTGATGCATGATCGGAGGAGTTGGACGGTGGAGGGGTTGAGAAGGG
TGTTGCCGGTGTTGAAAGAGCGGGGGTATAGGGTTGTTAGTTTGGGGGAG
GCGATGGAAATTGCTAATGCTGCATCTACTGACGGAGGAAAGGAGATTGA
TTGA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:3902454..3903257+ >ATCC64974_108100-T1 ID=ATCC64974_108100-T1|Name=ATCC64974_108100-T1|organism=Aspergillus niger N402|type=CDS|length=804bp|location=Sequence derived from alignment at OGUI01000017.1:3902454..3903257+ (Aspergillus niger N402)
ATGCTCCTCCCTCTACTCGTCTTACTCCTCATCCTCCTAACCCTCCTACC
TCTATACATAATCTACCGGCCACCGCACGCCCTAATCCGCTCCCTGGCGA
ACAAATACCCAGATACATTGTGGGAGATACCACTCCCCACCACCAAGGAC
ACAGAAGGGAAAGGAACGGAAAAAGTAATCGCCCTAACCATCGACGACGC
CCCCAGCACGTACACGCTCGACATCCTACACCTTCTCCAACAACATGACG
CGCGGGCGACATTCTTCCTCATCGGTTCGCAGATCCCCGGCCGGGAGGGG
ATTCTACATACGCTCGTGAAGAGCGGGATGGAGCTGGGTAATCATGCGAT
GCACGATGAGCCGTCTGTTTCGATTGGGGAGGAGGTGCTGGAGAGGGAGA
TGTTGGAGGTGGATGGGGTGATTGACAGGGTTTATGAGGAATCTGGGGTG
AAGCGGCCACGGTATGAGGACGGGGCTGTGAAGAAGTGGTTCCGGCCTGG
ATCGGGGTTCTTTAATGGGTGGATGAGGGGGCTTGTGCAGAGACTCGGGT
ATAAGATTGTGTTGGGGAGTGTGTATCCGCATGATGCGCAGATCGGGTGG
GCGGGGGTGAATGCGTGGCATGTGAGGAGTATGGTTAGGGAGGGGAGTAT
TGTTGTGATGCATGATCGGAGGAGTTGGACGGTGGAGGGGTTGAGAAGGG
TGTTGCCGGTGTTGAAAGAGCGGGGGTATAGGGTTGTTAGTTTGGGGGAG
GCGATGGAAATTGCTAATGCTGCATCTACTGACGGAGGAAAGGAGATTGA
TTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_108100-T1.exon1 | ATCC64974_108100-T1.exon1 | Aspergillus niger N402 | exon |
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_108100-T1 | ATCC64974_108100-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | CAZy:CE4 |
| DBxref | InterPro:IPR011330 |
| DBxref | InterPro:IPR002509 |
| DBxref | PFAM:PF01522 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:3902454..3903257 + |
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