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ATCC64974_110070-T1, ATCC64974_110070-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_110070-T1
Unique NameATCC64974_110070-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4534563..4536041+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_110070-T1 ID=ATCC64974_110070-T1|Name=ATCC64974_110070-T1|organism=Aspergillus niger N402|type=mRNA|length=1479bp|location=Sequence derived from alignment at OGUI01000017.1:4534563..4536041+ (Aspergillus niger N402)
ATGGATCCGCCTCGCAACATTCAGACTCCAGAATTGCCCGAAAGTGGCTC
AGTCAAAGACAAGATCGGGAAGTTTAGTGCCTATCAGCAGCAGCCCTCTG
GCTTGAAAGATGCATTCGGGAAAACCCCAACGAGCATAGGGGCGAATAGG
TCACGCACTCCGCAGCAGATCGCTGCCCAGCTGGCCGCAGGAAGATCGAC
GCCAGGTGAAATCACTGCCACGCACACGGGCGTCAGCAGGACGCAAGGTT
CGAGACCGACGACTTCAAAACGCAGTGATGACAACGAGGGTCCGCCGTTG
CTAGCCCCAAAGCCGGTATGGGCTACGAGTGCAAACACGGCCTCGGTGAA
CAAGCTCCTTCGCAGCGAGGCCGATTTGCCAATTAGAGACAAGTCAATTC
AGCGAAGACCAGTAGCTCAGATATCTCCCATAGAGGCGGCGAGGTTGGCT
GCGAAGAAGCCTCGACCTCCACCTGTGCCACGAAAACCAGCTGCGGTTGC
CACTGGTCCAACCTCAGTTCCTATCAACGTACATTCCAAAGGCCCAGAGA
GTCCAGAGCCGACCTCCAAAAACCACTCCTCACGTCACCTTGAGGATACT
ACTATCCCTTTCAAGGCCCCGCCAGCACTTCCACCCCGAACTGGCGCTTC
GTCCGTGCCTCGGAAAGACCTGACAAATCATCGGCGGCTTTTAGACACCA
ACCATGGGTCCCGGAGACGACCATCGACGCCTGGGACTGCATCGCTGTAT
ACTACATCACTGAGCAATAGTACTACGAGTTTGCTCGACAGCTCCTCCGG
ACTGGATGAAGGGGCCTTATCGGATGCGGTCGTGGCCTCGTCAAGGGCAT
CTGTTCGGGCTTCACAGGAAAGGAAAGTCCCACCGCCCCCACCGCCAGAG
CGCCGGGCGAGGTCTCGATCTCTAAAGCAATTCCCGCATACGGCCAAGGG
AGAACACACAGATTCATCTAGTCCATCCACACATTTACGACAGACCCTCC
GGGAACCGACCAAGATAGCCGAAAATGATGAGGGGTACCAAAGGCATAAG
CATCTGATTCGCAAGCATCCGCACAAGCATCACGAAGGTGACCGCAGAAG
ATGGCGGAGTGAGATTACGGAGAAAGAGCGAAAGCGGTACGAGGGTGTCT
GGGCTGCGAACAAGGGATTGTTGCTCCCTCCCGCGCACTTGAGGGTCCCC
GAAGCGTACCCGCCGGAGTCCTCCGAGATGGTGGTCAACCTGGTGGCCGC
TGACATCTGGTCACGTAGTCGCCTGCCGCGACATGTTCTAGCACAAGTAT
GGGATTTAGTGGACGGGCAACATATTGGTCTTCTCACCCGAGAGGAATTT
GTGGTTGGGATGTGGTTGATCGACCAGCAGCTGAAAGGCCATAAACTCCC
ACCCAGGGTGCCCGCCAGTGTGTGGGGAAGCGCCAAGCGGATATCAGGAG
TGCACATTCATGGGCTTCCTCCTGCCTGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:4534563..4536041+

>ATCC64974_110070-T1 ID=ATCC64974_110070-T1|Name=ATCC64974_110070-T1|organism=Aspergillus niger N402|type=CDS|length=1479bp|location=Sequence derived from alignment at OGUI01000017.1:4534563..4536041+ (Aspergillus niger N402)
ATGGATCCGCCTCGCAACATTCAGACTCCAGAATTGCCCGAAAGTGGCTC
AGTCAAAGACAAGATCGGGAAGTTTAGTGCCTATCAGCAGCAGCCCTCTG
GCTTGAAAGATGCATTCGGGAAAACCCCAACGAGCATAGGGGCGAATAGG
TCACGCACTCCGCAGCAGATCGCTGCCCAGCTGGCCGCAGGAAGATCGAC
GCCAGGTGAAATCACTGCCACGCACACGGGCGTCAGCAGGACGCAAGGTT
CGAGACCGACGACTTCAAAACGCAGTGATGACAACGAGGGTCCGCCGTTG
CTAGCCCCAAAGCCGGTATGGGCTACGAGTGCAAACACGGCCTCGGTGAA
CAAGCTCCTTCGCAGCGAGGCCGATTTGCCAATTAGAGACAAGTCAATTC
AGCGAAGACCAGTAGCTCAGATATCTCCCATAGAGGCGGCGAGGTTGGCT
GCGAAGAAGCCTCGACCTCCACCTGTGCCACGAAAACCAGCTGCGGTTGC
CACTGGTCCAACCTCAGTTCCTATCAACGTACATTCCAAAGGCCCAGAGA
GTCCAGAGCCGACCTCCAAAAACCACTCCTCACGTCACCTTGAGGATACT
ACTATCCCTTTCAAGGCCCCGCCAGCACTTCCACCCCGAACTGGCGCTTC
GTCCGTGCCTCGGAAAGACCTGACAAATCATCGGCGGCTTTTAGACACCA
ACCATGGGTCCCGGAGACGACCATCGACGCCTGGGACTGCATCGCTGTAT
ACTACATCACTGAGCAATAGTACTACGAGTTTGCTCGACAGCTCCTCCGG
ACTGGATGAAGGGGCCTTATCGGATGCGGTCGTGGCCTCGTCAAGGGCAT
CTGTTCGGGCTTCACAGGAAAGGAAAGTCCCACCGCCCCCACCGCCAGAG
CGCCGGGCGAGGTCTCGATCTCTAAAGCAATTCCCGCATACGGCCAAGGG
AGAACACACAGATTCATCTAGTCCATCCACACATTTACGACAGACCCTCC
GGGAACCGACCAAGATAGCCGAAAATGATGAGGGGTACCAAAGGCATAAG
CATCTGATTCGCAAGCATCCGCACAAGCATCACGAAGGTGACCGCAGAAG
ATGGCGGAGTGAGATTACGGAGAAAGAGCGAAAGCGGTACGAGGGTGTCT
GGGCTGCGAACAAGGGATTGTTGCTCCCTCCCGCGCACTTGAGGGTCCCC
GAAGCGTACCCGCCGGAGTCCTCCGAGATGGTGGTCAACCTGGTGGCCGC
TGACATCTGGTCACGTAGTCGCCTGCCGCGACATGTTCTAGCACAAGTAT
GGGATTTAGTGGACGGGCAACATATTGGTCTTCTCACCCGAGAGGAATTT
GTGGTTGGGATGTGGTTGATCGACCAGCAGCTGAAAGGCCATAAACTCCC
ACCCAGGGTGCCCGCCAGTGTGTGGGGAAGCGCCAAGCGGATATCAGGAG
TGCACATTCATGGGCTTCCTCCTGCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IRS4ATCC64974_110070Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110070-T1.exon1ATCC64974_110070-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110070-T1.cdsATCC64974_110070-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110070-T1ATCC64974_110070-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR000261
DBxrefPFAM:PF12763
ProductIncreased rDNA silencing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4534563..4536041 +
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