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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:4534563..4536041+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_110070-T1 ID=ATCC64974_110070-T1|Name=ATCC64974_110070-T1|organism=Aspergillus niger N402|type=mRNA|length=1479bp|location=Sequence derived from alignment at OGUI01000017.1:4534563..4536041+ (Aspergillus niger N402)
ATGGATCCGCCTCGCAACATTCAGACTCCAGAATTGCCCGAAAGTGGCTC
AGTCAAAGACAAGATCGGGAAGTTTAGTGCCTATCAGCAGCAGCCCTCTG
GCTTGAAAGATGCATTCGGGAAAACCCCAACGAGCATAGGGGCGAATAGG
TCACGCACTCCGCAGCAGATCGCTGCCCAGCTGGCCGCAGGAAGATCGAC
GCCAGGTGAAATCACTGCCACGCACACGGGCGTCAGCAGGACGCAAGGTT
CGAGACCGACGACTTCAAAACGCAGTGATGACAACGAGGGTCCGCCGTTG
CTAGCCCCAAAGCCGGTATGGGCTACGAGTGCAAACACGGCCTCGGTGAA
CAAGCTCCTTCGCAGCGAGGCCGATTTGCCAATTAGAGACAAGTCAATTC
AGCGAAGACCAGTAGCTCAGATATCTCCCATAGAGGCGGCGAGGTTGGCT
GCGAAGAAGCCTCGACCTCCACCTGTGCCACGAAAACCAGCTGCGGTTGC
CACTGGTCCAACCTCAGTTCCTATCAACGTACATTCCAAAGGCCCAGAGA
GTCCAGAGCCGACCTCCAAAAACCACTCCTCACGTCACCTTGAGGATACT
ACTATCCCTTTCAAGGCCCCGCCAGCACTTCCACCCCGAACTGGCGCTTC
GTCCGTGCCTCGGAAAGACCTGACAAATCATCGGCGGCTTTTAGACACCA
ACCATGGGTCCCGGAGACGACCATCGACGCCTGGGACTGCATCGCTGTAT
ACTACATCACTGAGCAATAGTACTACGAGTTTGCTCGACAGCTCCTCCGG
ACTGGATGAAGGGGCCTTATCGGATGCGGTCGTGGCCTCGTCAAGGGCAT
CTGTTCGGGCTTCACAGGAAAGGAAAGTCCCACCGCCCCCACCGCCAGAG
CGCCGGGCGAGGTCTCGATCTCTAAAGCAATTCCCGCATACGGCCAAGGG
AGAACACACAGATTCATCTAGTCCATCCACACATTTACGACAGACCCTCC
GGGAACCGACCAAGATAGCCGAAAATGATGAGGGGTACCAAAGGCATAAG
CATCTGATTCGCAAGCATCCGCACAAGCATCACGAAGGTGACCGCAGAAG
ATGGCGGAGTGAGATTACGGAGAAAGAGCGAAAGCGGTACGAGGGTGTCT
GGGCTGCGAACAAGGGATTGTTGCTCCCTCCCGCGCACTTGAGGGTCCCC
GAAGCGTACCCGCCGGAGTCCTCCGAGATGGTGGTCAACCTGGTGGCCGC
TGACATCTGGTCACGTAGTCGCCTGCCGCGACATGTTCTAGCACAAGTAT
GGGATTTAGTGGACGGGCAACATATTGGTCTTCTCACCCGAGAGGAATTT
GTGGTTGGGATGTGGTTGATCGACCAGCAGCTGAAAGGCCATAAACTCCC
ACCCAGGGTGCCCGCCAGTGTGTGGGGAAGCGCCAAGCGGATATCAGGAG
TGCACATTCATGGGCTTCCTCCTGCCTGA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:4534563..4536041+ >ATCC64974_110070-T1 ID=ATCC64974_110070-T1|Name=ATCC64974_110070-T1|organism=Aspergillus niger N402|type=CDS|length=1479bp|location=Sequence derived from alignment at OGUI01000017.1:4534563..4536041+ (Aspergillus niger N402)
ATGGATCCGCCTCGCAACATTCAGACTCCAGAATTGCCCGAAAGTGGCTC
AGTCAAAGACAAGATCGGGAAGTTTAGTGCCTATCAGCAGCAGCCCTCTG
GCTTGAAAGATGCATTCGGGAAAACCCCAACGAGCATAGGGGCGAATAGG
TCACGCACTCCGCAGCAGATCGCTGCCCAGCTGGCCGCAGGAAGATCGAC
GCCAGGTGAAATCACTGCCACGCACACGGGCGTCAGCAGGACGCAAGGTT
CGAGACCGACGACTTCAAAACGCAGTGATGACAACGAGGGTCCGCCGTTG
CTAGCCCCAAAGCCGGTATGGGCTACGAGTGCAAACACGGCCTCGGTGAA
CAAGCTCCTTCGCAGCGAGGCCGATTTGCCAATTAGAGACAAGTCAATTC
AGCGAAGACCAGTAGCTCAGATATCTCCCATAGAGGCGGCGAGGTTGGCT
GCGAAGAAGCCTCGACCTCCACCTGTGCCACGAAAACCAGCTGCGGTTGC
CACTGGTCCAACCTCAGTTCCTATCAACGTACATTCCAAAGGCCCAGAGA
GTCCAGAGCCGACCTCCAAAAACCACTCCTCACGTCACCTTGAGGATACT
ACTATCCCTTTCAAGGCCCCGCCAGCACTTCCACCCCGAACTGGCGCTTC
GTCCGTGCCTCGGAAAGACCTGACAAATCATCGGCGGCTTTTAGACACCA
ACCATGGGTCCCGGAGACGACCATCGACGCCTGGGACTGCATCGCTGTAT
ACTACATCACTGAGCAATAGTACTACGAGTTTGCTCGACAGCTCCTCCGG
ACTGGATGAAGGGGCCTTATCGGATGCGGTCGTGGCCTCGTCAAGGGCAT
CTGTTCGGGCTTCACAGGAAAGGAAAGTCCCACCGCCCCCACCGCCAGAG
CGCCGGGCGAGGTCTCGATCTCTAAAGCAATTCCCGCATACGGCCAAGGG
AGAACACACAGATTCATCTAGTCCATCCACACATTTACGACAGACCCTCC
GGGAACCGACCAAGATAGCCGAAAATGATGAGGGGTACCAAAGGCATAAG
CATCTGATTCGCAAGCATCCGCACAAGCATCACGAAGGTGACCGCAGAAG
ATGGCGGAGTGAGATTACGGAGAAAGAGCGAAAGCGGTACGAGGGTGTCT
GGGCTGCGAACAAGGGATTGTTGCTCCCTCCCGCGCACTTGAGGGTCCCC
GAAGCGTACCCGCCGGAGTCCTCCGAGATGGTGGTCAACCTGGTGGCCGC
TGACATCTGGTCACGTAGTCGCCTGCCGCGACATGTTCTAGCACAAGTAT
GGGATTTAGTGGACGGGCAACATATTGGTCTTCTCACCCGAGAGGAATTT
GTGGTTGGGATGTGGTTGATCGACCAGCAGCTGAAAGGCCATAAACTCCC
ACCCAGGGTGCCCGCCAGTGTGTGGGGAAGCGCCAAGCGGATATCAGGAG
TGCACATTCATGGGCTTCCTCCTGCCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_110070-T1.exon1 | ATCC64974_110070-T1.exon1 | Aspergillus niger N402 | exon |
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_110070-T1 | ATCC64974_110070-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR011992 |
| DBxref | InterPro:IPR000261 |
| DBxref | PFAM:PF12763 |
| Product | Increased rDNA silencing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:4534563..4536041 + |
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