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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:2091971..2093347- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_3260-T1 ID=CAN33_3260-T1|Name=CAN33_3260-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1377bp|location=Sequence derived from alignment at NKJJ01000004.1:2091971..2093347- (Aspergillus niger FDAARGOS_311)
ATGACTGCTGCGCTTGTGAAACAGCCGGCCTGGGAGGAACGGAAACAGGC
ACCCGCGGAGATGGACGACGATCCCCAGACGTCTTTATCGGAAACAACTT
CCAACAATGCCAGAGAAATCAGCGCTCCATTTTTAGAGCTTCCCCCTGAG
CTAGTCCAGCAAATACTGTCATATTTATCGGCTCAAGATCTCGCTCGCCT
GTCAACCACCTGCCGCACTTTCGCTGAGCATGCGACCAACGAGCTTTTGT
GGGCCAATATCATCAACTCCAATCTTCCCGAGCCCATACACACACCAGGT
GTCTTTGACTCCTTTCGCAGTCTCTACATCGCCCACCACCCTTGCTGGTT
TATTCCTCGCAACAAAATCTGGTTTTCGGACACTGAGCACACGGGCAATT
TAATCCTCGCCCGCTATGATCACCGACGGGGCGTCATAGAGGCTTACCGA
GTCATCGCAGAACGTCGCTCGCACCAATTTCAACTCTGGGACTGGAACCC
AGATGTTATTATCCAAACGTTCAATCCTAAAGTCAGTCTATGGCTAGATG
ATCCAGTCCTGCTCCTTAAAAACCACCACGAGGGACGGCCGTTATATTTA
CGCGGTGAGACCCGCATGCCTATGCCCCTCGAGACGCAGCATGTCTTCAA
CTCGTTTTCGCTTTGTTCCACCCGAATGACGTCTGATGTTGTGGCGAACA
AACAATGGCCTCCAATAACCATTCCAACCAAACACCGCGTCTATCGCGGT
GAAGTTGACCCGGAGTGGGAACACCACCCCCACAGCTGGACAGAATTTCT
GAGCATGCGTTTCGAATTAGAAGATGGGCACATTTCCGATTGGGCATGCC
GATCTTCACCGCTGGCCGGAGCGAGACGCTGTCGACTTATGCTACACTTG
ACCCGGAGCTGTATACGCCCACGGACAAGAAACCATACCAAGGCATTTGG
GTTGGAGACTACTCAGCACATGGATGTGAATTTCTGCTTTTCCTACAACG
TGATCAAGGGAAGGGCGATGCAGCCTTGAGGCTATCAAGCTCACTGGAGA
CCCTAACGTTCCTCGTGGCGAAATATCGTTCTCAGCAGACGACATTGGCC
CAGGAGGATTTGTTCGCATTGCGGAGGAAGCTCTCTTTCAAGGAGCACGC
ATAGTAAGGAGCAAAGGCCATGTAGCGGGCCTCGGTTTTAGAGATGGTAA
GTTTGATCGGAAAAGTGGCCGGACATCTCGCTTTGCAAACTAACCTGGTT
CTTAGATACGTTTATCGCATCCCAACTCATTTTGATTTCGCCAGAGTGCG
TGGCGCACTATTGGGAAACTATGGGCCATATCTCCTATTACCGTCGTCTG
GACATCGATGCATTACTCCGGACATAG back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:2091971..2093347- >CAN33_3260-T1 ID=CAN33_3260-T1|Name=CAN33_3260-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4728bp|location=Sequence derived from alignment at NKJJ01000004.1:2091971..2093347- (Aspergillus niger FDAARGOS_311)
ATACGTTTATCGCATCCCAACTCATTTTGATTTCGCCAGAGTGCGTGGCG
CACTATTGGGAAACTATGGGCCATATCTCCTATTACCGTCGTCTGGACAT
CGATGCATTACTCCGGACATAGGCTATCAAGCTCACTGGAGACCCTAACG
TTCCTCGTGGCGAAATATCGTTCTCAGCAGACGACATTGGCCCAGGAGGA
TTTGTTCGCATTGCGGAGGAAGCTCTCTTTCAAGGAGCACGCATAGTAAG
GAGCAAAGGCCATGTAGCGGGCCTCGGTTTTAGAGATGAAGATGGGCACA
TTTCCGATTGGGCATGCCGATCTTCACCGCTGGCCGGAGCGAGACGCTGT
CGACTTATGCTACACTTGACCCGGAGCTGTATACGCCCACGGACAAGAAA
CCATACCAAGGCATTTGGATGACTGCTGCGCTTGTGAAACAGCCGGCCTG
GGAGGAACGGAAACAGGCACCCGCGGAGATGGACGACGATCCCCAGACGT
CTTTATCGGAAACAACTTCCAACAATGCCAGAGAAATCAGCGCTCCATTT
TTAGAGCTTCCCCCTGAGCTAGTCCAGCAAATACTGTCATATTTATCGGC
TCAAGATCTCGCTCGCCTGTCAACCACCTGCCGCACTTTCGCTGAGCATG
CGACCAACGAGCTTTTGTGGGCCAATATCATCAACTCCAATCTTCCCGAG
CCCATACACACACCAGGTGTCTTTGACTCCTTTCGCAGTCTCTACATCGC
CCACCACCCTTGCTGGTTTATTCCTCGCAACAAAATCTGGTTTTCGGACA
CTGAGCACACGGGCAATTTAATCCTCGCCCGCTATGATCACCGACGGGGC
GTCATAGAGGCTTACCGAGTCATCGCAGAACGTCGCTCGCACCAATTTCA
ACTCTGGGACTGGAACCCAGATGTTATTATCCAAACGTTCAATCCTAAAG
TCAGTCTATGGCTAGATGATCCAGTCCTGCTCCTTAAAAACCACCACGAG
GGACGGCCGTTATATTTACGCGGTGAGACCCGCATGCCTATGCCCCTCGA
GACGCAGCATGTCTTCAACTCGTTTTCGCTTTGTTCCACCCGAATGACGT
CTGATGTTGTGGCGAACAAACAATGGCCTCCAATAACCATTCCAACCAAA
CACCGCGTCTATCGCGGTGAAGTTGACCCGGAATACGTTTATCGCATCCC
AACTCATTTTGATTTCGCCAGAGTGCGTGGCGCACTATTGGGAAACTATG
GGCCATATCTCCTATTACCGTCGTCTGGACATCGATGCATTACTCCGGAC
ATAGGCTATCAAGCTCACTGGAGACCCTAACGTTCCTCGTGGCGAAATAT
CGTTCTCAGCAGACGACATTGGCCCAGGAGGATTTGTTCGCATTGCGGAG
GAAGCTCTCTTTCAAGGAGCACGCATAGTAAGGAGCAAAGGCCATGTAGC
GGGCCTCGGTTTTAGAGATGAAGATGGGCACATTTCCGATTGGGCATGCC
GATCTTCACCGCTGGCCGGAGCGAGACGCTGTCGACTTATGCTACACTTG
ACCCGGAGCTGTATACGCCCACGGACAAGAAACCATACCAAGGCATTTGG
ATGACTGCTGCGCTTGTGAAACAGCCGGCCTGGGAGGAACGGAAACAGGC
ACCCGCGGAGATGGACGACGATCCCCAGACGTCTTTATCGGAAACAACTT
CCAACAATGCCAGAGAAATCAGCGCTCCATTTTTAGAGCTTCCCCCTGAG
CTAGTCCAGCAAATACTGTCATATTTATCGGCTCAAGATCTCGCTCGCCT
GTCAACCACCTGCCGCACTTTCGCTGAGCATGCGACCAACGAGCTTTTGT
GGGCCAATATCATCAACTCCAATCTTCCCGAGCCCATACACACACCAGGT
GTCTTTGACTCCTTTCGCAGTCTCTACATCGCCCACCACCCTTGCTGGTT
TATTCCTCGCAACAAAATCTGGTTTTCGGACACTGAGCACACGGGCAATT
TAATCCTCGCCCGCTATGATCACCGACGGGGCGTCATAGAGGCTTACCGA
GTCATCGCAGAACGTCGCTCGCACCAATTTCAACTCTGGGACTGGAACCC
AGATGTTATTATCCAAACGTTCAATCCTAAAGTCAGTCTATGGCTAGATG
ATCCAGTCCTGCTCCTTAAAAACCACCACGAGGGACGGCCGTTATATTTA
CGCGGTGAGACCCGCATGCCTATGCCCCTCGAGACGCAGCATGTCTTCAA
CTCGTTTTCGCTTTGTTCCACCCGAATGACGTCTGATGTTGTGGCGAACA
AACAATGGCCTCCAATAACCATTCCAACCAAACACCGCGTCTATCGCGGT
GAAGTTGACCCGGAATACGTTTATCGCATCCCAACTCATTTTGATTTCGC
CAGAGTGCGTGGCGCACTATTGGGAAACTATGGGCCATATCTCCTATTAC
CGTCGTCTGGACATCGATGCATTACTCCGGACATAGGCTATCAAGCTCAC
TGGAGACCCTAACGTTCCTCGTGGCGAAATATCGTTCTCAGCAGACGACA
TTGGCCCAGGAGGATTTGTTCGCATTGCGGAGGAAGCTCTCTTTCAAGGA
GCACGCATAGTAAGGAGCAAAGGCCATGTAGCGGGCCTCGGTTTTAGAGA
TGAAGATGGGCACATTTCCGATTGGGCATGCCGATCTTCACCGCTGGCCG
GAGCGAGACGCTGTCGACTTATGCTACACTTGACCCGGAGCTGTATACGC
CCACGGACAAGAAACCATACCAAGGCATTTGGATGACTGCTGCGCTTGTG
AAACAGCCGGCCTGGGAGGAACGGAAACAGGCACCCGCGGAGATGGACGA
CGATCCCCAGACGTCTTTATCGGAAACAACTTCCAACAATGCCAGAGAAA
TCAGCGCTCCATTTTTAGAGCTTCCCCCTGAGCTAGTCCAGCAAATACTG
TCATATTTATCGGCTCAAGATCTCGCTCGCCTGTCAACCACCTGCCGCAC
TTTCGCTGAGCATGCGACCAACGAGCTTTTGTGGGCCAATATCATCAACT
CCAATCTTCCCGAGCCCATACACACACCAGGTGTCTTTGACTCCTTTCGC
AGTCTCTACATCGCCCACCACCCTTGCTGGTTTATTCCTCGCAACAAAAT
CTGGTTTTCGGACACTGAGCACACGGGCAATTTAATCCTCGCCCGCTATG
ATCACCGACGGGGCGTCATAGAGGCTTACCGAGTCATCGCAGAACGTCGC
TCGCACCAATTTCAACTCTGGGACTGGAACCCAGATGTTATTATCCAAAC
GTTCAATCCTAAAGTCAGTCTATGGCTAGATGATCCAGTCCTGCTCCTTA
AAAACCACCACGAGGGACGGCCGTTATATTTACGCGGTGAGACCCGCATG
CCTATGCCCCTCGAGACGCAGCATGTCTTCAACTCGTTTTCGCTTTGTTC
CACCCGAATGACGTCTGATGTTGTGGCGAACAAACAATGGCCTCCAATAA
CCATTCCAACCAAACACCGCGTCTATCGCGGTGAAGTTGACCCGGAATAC
GTTTATCGCATCCCAACTCATTTTGATTTCGCCAGAGTGCGTGGCGCACT
ATTGGGAAACTATGGGCCATATCTCCTATTACCGTCGTCTGGACATCGAT
GCATTACTCCGGACATAGGCTATCAAGCTCACTGGAGACCCTAACGTTCC
TCGTGGCGAAATATCGTTCTCAGCAGACGACATTGGCCCAGGAGGATTTG
TTCGCATTGCGGAGGAAGCTCTCTTTCAAGGAGCACGCATAGTAAGGAGC
AAAGGCCATGTAGCGGGCCTCGGTTTTAGAGATGAAGATGGGCACATTTC
CGATTGGGCATGCCGATCTTCACCGCTGGCCGGAGCGAGACGCTGTCGAC
TTATGCTACACTTGACCCGGAGCTGTATACGCCCACGGACAAGAAACCAT
ACCAAGGCATTTGGATGACTGCTGCGCTTGTGAAACAGCCGGCCTGGGAG
GAACGGAAACAGGCACCCGCGGAGATGGACGACGATCCCCAGACGTCTTT
ATCGGAAACAACTTCCAACAATGCCAGAGAAATCAGCGCTCCATTTTTAG
AGCTTCCCCCTGAGCTAGTCCAGCAAATACTGTCATATTTATCGGCTCAA
GATCTCGCTCGCCTGTCAACCACCTGCCGCACTTTCGCTGAGCATGCGAC
CAACGAGCTTTTGTGGGCCAATATCATCAACTCCAATCTTCCCGAGCCCA
TACACACACCAGGTGTCTTTGACTCCTTTCGCAGTCTCTACATCGCCCAC
CACCCTTGCTGGTTTATTCCTCGCAACAAAATCTGGTTTTCGGACACTGA
GCACACGGGCAATTTAATCCTCGCCCGCTATGATCACCGACGGGGCGTCA
TAGAGGCTTACCGAGTCATCGCAGAACGTCGCTCGCACCAATTTCAACTC
TGGGACTGGAACCCAGATGTTATTATCCAAACGTTCAATCCTAAAGTCAG
TCTATGGCTAGATGATCCAGTCCTGCTCCTTAAAAACCACCACGAGGGAC
GGCCGTTATATTTACGCGGTGAGACCCGCATGCCTATGCCCCTCGAGACG
CAGCATGTCTTCAACTCGTTTTCGCTTTGTTCCACCCGAATGACGTCTGA
TGTTGTGGCGAACAAACAATGGCCTCCAATAACCATTCCAACCAAACACC
GCGTCTATCGCGGTGAAGTTGACCCGGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR021894 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| Product | protein of unknown function (DUF3506) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:2091971..2093347 - |
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