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CAN33_9350-T1, CAN33_9350-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_9350-T1
Unique NameCAN33_9350-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000006.1:36400..37439+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_9350-T1 ID=CAN33_9350-T1|Name=CAN33_9350-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1040bp|location=Sequence derived from alignment at NKJJ01000006.1:36400..37439+ (Aspergillus niger FDAARGOS_311)
ATGTCGTGGCCTATGTGCGAGCGCGTGGTGTGCGGGTCATCCCAGAGATC
GATATGCCCAGCCATTCTGCTTCTGGGTGGAAGCAGGTCGACCCCCAGAT
GGCGACCTGCGTGGACTCCTGGTGGTCCAAACGATTATGCCCTGCATACC
GCGGTGGAGCCTCCGCCCGGCCAGATGGACATTATTTACAACGGCACGTA
CGATGTGGTCCGACCGGTCTACAACGAGCTGTCCAACATCTTCCCAGACA
ACTGGTCCCATGTGGGGGCGGATGAAATCCAGCCTAATTGTTTTAACTTC
AGCAGCTATGTTACCGACTGGTTTGCGCAGGATCCGTCGCGCACCTATAA
TGACCTGGCCCAATACTGGGTCGACCATGCCGTGCCGATTTTCCAGAACC
ACAGTGCCTCGCGGCGACTAGTCATGTGGGAAGATATTGTACTGTCAACA
GAGCATGCGTATGATGTCCCTACGAACATCGTCATGCAGACCTGGAACAG
CGGGCTGGACTACATCAACCAGCTGACCGCCAAGGGCTACGACGTTATTG
TATCATCGGCGGATTTTATGTATTTGGACTGCGGGATGGGGGCTTCCTAA
CGAATGATCCTCGCTACGATGTAATGAGTAATCCTGATGCAAGCACAGCA
AACTTCAACTACGGCGGCAACGGGGGCTCGTGGTGTGCGCCGTACAAGAC
ATGGCAGCGCATCTACGACTACGACTTCACGCAGAACCTTACTGTTACTC
AGGCCCAGCACATTGTAGGAGCAGAGGCGCCGCTCTGGTCAGAGCAAGTG
GATGATGTAACGGTATCCAGTCAATTTTGGCCGCGTGCCGCTGCGCTGGC
GGAGCTGGTGTGGTCTGGGAATCGTGATGAGAACGGGCGGAAACGCACGA
CGCTGATGACCCAGCGCATCCTGAACTTCCGCGAGTATCTGGTGGCCAAC
GGGGTTCAAGCGCAAGCGTTGGTTCCTAAGTACTGTGTGCAGCGTCCGCA
TACCTGCGACTTGTATCTAAACCAGAGTGCGATTCAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000006.1:36400..37439+

>CAN33_9350-T1 ID=CAN33_9350-T1|Name=CAN33_9350-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1962bp|location=Sequence derived from alignment at NKJJ01000006.1:36400..37439+ (Aspergillus niger FDAARGOS_311)
ATGTCGTGGCCTATGTGCGAGCGCGTGGTGTGCGGGTCATCCCAGAGATC
GATATGCCCAGCCATTCTGCTTCTGGGTGGAAGCAGGTCGACCCCCAGAT
GGCGACCTGCGTGGACTCCTGGTGGTCCAAACGATTATGCCCTGCATACC
GCGGTGGAGCCTCCGCCCGGCCAGATGGACATTATTTACAACGGCACGTA
CGATGTGGTCCGACCGGTCTACAACGAGCTGTCCAACATCTTCCCAGACA
ACTGGTCCCATGTGGGGGCGGATGAAATCCAGCCTAATTGTTTTAACTTC
AGCAGCTATGTTACCGACTGGTTTGCGCAGGATCCGTCGCGCACCTATAA
TGACCTGGCCCAATACTGGGTCGACCATGCCGTGCCGATTTTCCAGAACC
ACAGTGCCTCGCGGCGACTAGTCATGTGGGAAGATATTGTACTGTCAACA
GAGCATGCGTATGATGTCCCTACGAACATCGTCATGCAGACCTGGAACAG
CGGGCTGGACTACATCAACCAGCTGACCGCCAAGGGCTACGACGTTATTG
TATCATCGGCGGATTTTATTAATCCTGATGCAAGCACAGCAAACTTCAAC
TACGGCGGCAACGGGGGCTCGTGGTGTGCGCCGTACAAGACATGGCAGCG
CATCTACGACTACGACTTCACGCAGAACCTTACTGTTACTCAGGCCCAGC
ACATTGTAGGAGCAGAGGCGCCGCTCTGGTCAGAGCAAGTGGATGATGTA
ACGGTATCCAGTCAATTTTGGCCGCGTGCCGCTGCGCTGGCGGAGCTGGT
GTGGTCTGGGAATCGTGATGAGAACGGGCGGAAACGCACGACGCTGATGA
CCCAGCGCATCCTGAACTTCCGCGAGTATCTGGTGGCCAACGGGGTTCAA
GCGCAAGCGTTGGTTCCTAAGTACTGTGTGCAGCGTCCGCATACCTGCGA
CTTGTATCTAAACCAGAGTGCGATTCAGTAAATGTCGTGGCCTATGTGCG
AGCGCGTGGTGTGCGGGTCATCCCAGAGATCGATATGCCCAGCCATTCTG
CTTCTGGGTGGAAGCAGGTCGACCCCCAGATGGCGACCTGCGTGGACTCC
TGGTGGTCCAAACGATTATGCCCTGCATACCGCGGTGGAGCCTCCGCCCG
GCCAGATGGACATTATTTACAACGGCACGTACGATGTGGTCCGACCGGTC
TACAACGAGCTGTCCAACATCTTCCCAGACAACTGGTCCCATGTGGGGGC
GGATGAAATCCAGCCTAATTGTTTTAACTTCAGCAGCTATGTTACCGACT
GGTTTGCGCAGGATCCGTCGCGCACCTATAATGACCTGGCCCAATACTGG
GTCGACCATGCCGTGCCGATTTTCCAGAACCACAGTGCCTCGCGGCGACT
AGTCATGTGGGAAGATATTGTACTGTCAACAGAGCATGCGTATGATGTCC
CTACGAACATCGTCATGCAGACCTGGAACAGCGGGCTGGACTACATCAAC
CAGCTGACCGCCAAGGGCTACGACGTTATTGTATCATCGGCGGATTTTAT
TAATCCTGATGCAAGCACAGCAAACTTCAACTACGGCGGCAACGGGGGCT
CGTGGTGTGCGCCGTACAAGACATGGCAGCGCATCTACGACTACGACTTC
ACGCAGAACCTTACTGTTACTCAGGCCCAGCACATTGTAGGAGCAGAGGC
GCCGCTCTGGTCAGAGCAAGTGGATGATGTAACGGTATCCAGTCAATTTT
GGCCGCGTGCCGCTGCGCTGGCGGAGCTGGTGTGGTCTGGGAATCGTGAT
GAGAACGGGCGGAAACGCACGACGCTGATGACCCAGCGCATCCTGAACTT
CCGCGAGTATCTGGTGGCCAACGGGGTTCAAGCGCAAGCGTTGGTTCCTA
AGTACTGTGTGCAGCGTCCGCATACCTGCGACTTGTATCTAAACCAGAGT
GCGATTCAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563beta-N-acetylhexosaminidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_9350CAN33_9350Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9350-T1.exon1CAN33_9350-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_9350-T1.exon2CAN33_9350-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9350-T1.cdsCAN33_9350-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9350-T1CAN33_9350-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteCAZy:GH20
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR015883
DBxrefInterPro:IPR025705
DBxrefPFAM:PF00728
ProductGlycosyl hydrolase family 20 catalytic domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000006.1supercontigNKJJ01000006.1:36400..37439 +
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