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CAN33_33445-T1, CAN33_33445-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_33445-T1
Unique NameCAN33_33445-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:397631..398377+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_33445-T1 ID=CAN33_33445-T1|Name=CAN33_33445-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=747bp|location=Sequence derived from alignment at NKJJ01000007.1:397631..398377+ (Aspergillus niger FDAARGOS_311)
ATGAGCACCCTCGTCCACAACACCGTCGAACGCCTGGACCGGCCGAGTGC
CTACTATCTGGGCAAGGTGAGCTTCATCTCTACGACTAGCGGACCATGAC
AATACTAATTCATTAATCCTCTCCAGAACAAGCGTCGCAAGTTCAGCCAT
GATGAGGGCGAGAAACCCGAAGATCCCACCGACAACCTCAAGGATGCCAC
CACTCTCTACGTTGGCAATCTGTATGTTACAGAGTATCTCCGTTGTCAAG
TCCTTGCTAACAACACAAGTTCTTTTTACACCACCGAAGAGCAGATCCAT
GAGCTATTTGCCAAGTGAGCGGAAACCACCACCGAATGCGTTATCGACGA
GTACCGAGCTGATGGAGTACAGGTGCGGCGAGATTAAGCGGCTAGTCATG
GGCCTTGACCGGTACAACAAGACCCCCTGCGGATTTTGCTTCGTCGAATA
TTACACCCATCAGGATGCGCTGGACTGTCTGAAATACATTGGTGGCACAA
AGCTGGACGAGAGAATCATCCGGACGGATCTGGATCCTGGCTTCGAGGAG
GGTCGGCAATACGGGTATGTATATGATCGGGATTCTCGAACGCGCAGGCT
GCTGACGTTGGTAGACGTGGTAAATCGGGTGGTCAGGTCCGCGATGAGTA
CCGGGAGGAATACGACCCTGGTCGCGGTGGCTATGGACGTGCCTATGCGG
ATGACCAGCGACGACGGGAGGAGGAGGAGTATGGTAAGGGTAAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000007.1:397631..398377+

>CAN33_33445-T1 ID=CAN33_33445-T1|Name=CAN33_33445-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2655bp|location=Sequence derived from alignment at NKJJ01000007.1:397631..398377+ (Aspergillus niger FDAARGOS_311)
ATGAGCACCCTCGTCCACAACACCGTCGAACGCCTGGACCGGCCGAGTGC
CTACTATCTGGGCAAGAACAAGCGTCGCAAGTTCAGCCATGATGAGGGCG
AGAAACCCGAAGATCCCACCGACAACCTCAAGGATGCCACCACTCTCTAC
GTTGGCAATCTTTCTTTTTACACCACCGAAGAGCAGATCCATGAGCTATT
TGCCAAGTGCGGCGAGATTAAGCGGCTAGTCATGGGCCTTGACCGGTACA
ACAAGACCCCCTGCGGATTTTGCTTCGTCGAATATTACACCCATCAGGAT
GCGCTGGACTGTCTGAAATACATTGGTGGCACAAAGCTGGACGAGAGAAT
CATCCGGACGGATCTGGATCCTGGCTTCGAGGAGGGTCGGCAATACGGAC
GTGGTAAATCGGGTGGTCAGGTCCGCGATGAGTACCGGGAGGAATACGAC
CCTGGTCGCGGTGGCTATGGACGTGCCTATGCGGATGACCAGCGACGACG
GGAGGAGGAGGAGTATGGTAAGGGTAAGTAAATGAGCACCCTCGTCCACA
ACACCGTCGAACGCCTGGACCGGCCGAGTGCCTACTATCTGGGCAAGAAC
AAGCGTCGCAAGTTCAGCCATGATGAGGGCGAGAAACCCGAAGATCCCAC
CGACAACCTCAAGGATGCCACCACTCTCTACGTTGGCAATCTTTCTTTTT
ACACCACCGAAGAGCAGATCCATGAGCTATTTGCCAAGTGCGGCGAGATT
AAGCGGCTAGTCATGGGCCTTGACCGGTACAACAAGACCCCCTGCGGATT
TTGCTTCGTCGAATATTACACCCATCAGGATGCGCTGGACTGTCTGAAAT
ACATTGGTGGCACAAAGCTGGACGAGAGAATCATCCGGACGGATCTGGAT
CCTGGCTTCGAGGAGGGTCGGCAATACGGACGTGGTAAATCGGGTGGTCA
GGTCCGCGATGAGTACCGGGAGGAATACGACCCTGGTCGCGGTGGCTATG
GACGTGCCTATGCGGATGACCAGCGACGACGGGAGGAGGAGGAGTATGGT
AAGGGTAAGTAAATGAGCACCCTCGTCCACAACACCGTCGAACGCCTGGA
CCGGCCGAGTGCCTACTATCTGGGCAAGAACAAGCGTCGCAAGTTCAGCC
ATGATGAGGGCGAGAAACCCGAAGATCCCACCGACAACCTCAAGGATGCC
ACCACTCTCTACGTTGGCAATCTTTCTTTTTACACCACCGAAGAGCAGAT
CCATGAGCTATTTGCCAAGTGCGGCGAGATTAAGCGGCTAGTCATGGGCC
TTGACCGGTACAACAAGACCCCCTGCGGATTTTGCTTCGTCGAATATTAC
ACCCATCAGGATGCGCTGGACTGTCTGAAATACATTGGTGGCACAAAGCT
GGACGAGAGAATCATCCGGACGGATCTGGATCCTGGCTTCGAGGAGGGTC
GGCAATACGGACGTGGTAAATCGGGTGGTCAGGTCCGCGATGAGTACCGG
GAGGAATACGACCCTGGTCGCGGTGGCTATGGACGTGCCTATGCGGATGA
CCAGCGACGACGGGAGGAGGAGGAGTATGGTAAGGGTAAGTAAATGAGCA
CCCTCGTCCACAACACCGTCGAACGCCTGGACCGGCCGAGTGCCTACTAT
CTGGGCAAGAACAAGCGTCGCAAGTTCAGCCATGATGAGGGCGAGAAACC
CGAAGATCCCACCGACAACCTCAAGGATGCCACCACTCTCTACGTTGGCA
ATCTTTCTTTTTACACCACCGAAGAGCAGATCCATGAGCTATTTGCCAAG
TGCGGCGAGATTAAGCGGCTAGTCATGGGCCTTGACCGGTACAACAAGAC
CCCCTGCGGATTTTGCTTCGTCGAATATTACACCCATCAGGATGCGCTGG
ACTGTCTGAAATACATTGGTGGCACAAAGCTGGACGAGAGAATCATCCGG
ACGGATCTGGATCCTGGCTTCGAGGAGGGTCGGCAATACGGACGTGGTAA
ATCGGGTGGTCAGGTCCGCGATGAGTACCGGGAGGAATACGACCCTGGTC
GCGGTGGCTATGGACGTGCCTATGCGGATGACCAGCGACGACGGGAGGAG
GAGGAGTATGGTAAGGGTAAGTAAATGAGCACCCTCGTCCACAACACCGT
CGAACGCCTGGACCGGCCGAGTGCCTACTATCTGGGCAAGAACAAGCGTC
GCAAGTTCAGCCATGATGAGGGCGAGAAACCCGAAGATCCCACCGACAAC
CTCAAGGATGCCACCACTCTCTACGTTGGCAATCTTTCTTTTTACACCAC
CGAAGAGCAGATCCATGAGCTATTTGCCAAGTGCGGCGAGATTAAGCGGC
TAGTCATGGGCCTTGACCGGTACAACAAGACCCCCTGCGGATTTTGCTTC
GTCGAATATTACACCCATCAGGATGCGCTGGACTGTCTGAAATACATTGG
TGGCACAAAGCTGGACGAGAGAATCATCCGGACGGATCTGGATCCTGGCT
TCGAGGAGGGTCGGCAATACGGACGTGGTAAATCGGGTGGTCAGGTCCGC
GATGAGTACCGGGAGGAATACGACCCTGGTCGCGGTGGCTATGGACGTGC
CTATGCGGATGACCAGCGACGACGGGAGGAGGAGGAGTATGGTAAGGGTA
AGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBP20CAN33_33445Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33445-T1CAN33_33445-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33445-T1.exon1CAN33_33445-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_33445-T1.exon2CAN33_33445-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_33445-T1.exon3CAN33_33445-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_33445-T1.exon4CAN33_33445-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_33445-T1.exon5CAN33_33445-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33445-T1.cdsCAN33_33445-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteBUSCO:EOG09264G04
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034148
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductNuclear cap-binding protein subunit 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:397631..398377 +
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