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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000009.1:227935..228960- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_10745-T1 ID=CAN33_10745-T1|Name=CAN33_10745-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1026bp|location=Sequence derived from alignment at NKJJ01000009.1:227935..228960- (Aspergillus niger FDAARGOS_311)
ATGATTGAGCATATAATCGACAGTAAAGATGTCGGAGAAATCCAGACCCC
AGAAACTCCAGTATTACTAGCCAAATCACACACCCTGGCTTCAAGCAACA
ATGACATAGACGAGCTTGCCCCGGAAAGCCACCCTCCAACAGAAGAGACA
AAACCAGTCCTCTCACCAGCCGAGGACTCCCCAACACCCAAGTTCTGGAG
CCACACCATGCTCAAAAGCCCTGAAGGCAAAAACATTATCGTGCATTACT
GCAAGACACTCAAAAGCAGCGAAGAAGTTGCGCAACTCTTCCTAAATGAC
AAAATTCTCGGCTTCGACATGGAATGGAAAGCCCAGGCCTCCGCCTGGAA
CAGCATCCAAGACAACGTATCTCTAATCCAAATCGCAAACAGAGAGCGAA
TCGCTCTCTTCCACGTTGCCCTTTTCAGACCAGGCAGAAAGATCAGCGAC
CTCGTCCCTCCATCGTTGAAACAAATCATCGAATCCCCAGACATCACAAA
GCTCGGTGTATCAATCAAAGCAGACTGCACGCGTCTCCGCAAGTACCTCA
AGGTCGATGCGCACGGGATCTTCGAGCTCAGCCACCTCCATAAGCTGGTA
AAATACTGCCAGACTAACCCGAAACTCATCAACAAGCGCCCTGTCAACCT
GAGTGAGCAGGTGGAGGAACATCTGGGGCTCCCGTTGGAGAAGGCGGAAG
ATGTGAGGTGCAGTGATTGGACGGTATCTTTGAGTTATCGTCAGGTCCAA
TGTAAGTCTTATTCGTCAACTCTGATGTTTGATAAATGGTTAACGAGTGT
ATGTCTGTAGATGCTGCATCCGATTCTTACGCTTGTATCTGCTTGTTTGA
TACTATGGATGCGAAACGAAAGGCTCTCGACCCTCGACCTCCTTTGCCTG
CTCATGCGGATTTGGATCTGCCGATTCGTATTGTGCGAGAGCCGACCGTG
ACGACGGTCCCGGATGATGTCGAGGTGGTCAAGCCTTAGTGGCTTACTTT
GCGGAGGCAGAGTAACGATACAGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000009.1:227935..228960- >CAN33_10745-T1 ID=CAN33_10745-T1|Name=CAN33_10745-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2754bp|location=Sequence derived from alignment at NKJJ01000009.1:227935..228960- (Aspergillus niger FDAARGOS_311)
TGAATGCTGCATCCGATTCTTACGCTTGTATCTGCTTGTTTGATACTATG
GATGCGAAACGAAAGGCTCTCGACCCTCGACCTCCTTTGCCTGCTCATGC
GGATTTGGATCTGCCGATTCGTATTGTGCGAGAGCCGACCGTGACGACGG
TCCCGGATGATGTCGAGATGATTGAGCATATAATCGACAGTAAAGATGTC
GGAGAAATCCAGACCCCAGAAACTCCAGTATTACTAGCCAAATCACACAC
CCTGGCTTCAAGCAACAATGACATAGACGAGCTTGCCCCGGAAAGCCACC
CTCCAACAGAAGAGACAAAACCAGTCCTCTCACCAGCCGAGGACTCCCCA
ACACCCAAGTTCTGGAGCCACACCATGCTCAAAAGCCCTGAAGGCAAAAA
CATTATCGTGCATTACTGCAAGACACTCAAAAGCAGCGAAGAAGTTGCGC
AACTCTTCCTAAATGACAAAATTCTCGGCTTCGACATGGAATGGAAAGCC
CAGGCCTCCGCCTGGAACAGCATCCAAGACAACGTATCTCTAATCCAAAT
CGCAAACAGAGAGCGAATCGCTCTCTTCCACGTTGCCCTTTTCAGACCAG
GCAGAAAGATCAGCGACCTCGTCCCTCCATCGTTGAAACAAATCATCGAA
TCCCCAGACATCACAAAGCTCGGTGTATCAATCAAAGCAGACTGCACGCG
TCTCCGCAAGTACCTCAAGGTCGATGCGCACGGGATCTTCGAGCTCAGCC
ACCTCCATAAGCTGGTAAAATACTGCCAGACTAACCCGAAACTCATCAAC
AAGCGCCCTGTCAACCTGAGTGAGCAGGTGGAGGAACATCTGGGGCTCCC
GTTGGAGAAGGCGGAAGATGTGAGGTGCAGTGATTGGACGGTATCTTTGA
GTTATCGTCAGGTCCAATTGAATGCTGCATCCGATTCTTACGCTTGTATC
TGCTTGTTTGATACTATGGATGCGAAACGAAAGGCTCTCGACCCTCGACC
TCCTTTGCCTGCTCATGCGGATTTGGATCTGCCGATTCGTATTGTGCGAG
AGCCGACCGTGACGACGGTCCCGGATGATGTCGAGATGATTGAGCATATA
ATCGACAGTAAAGATGTCGGAGAAATCCAGACCCCAGAAACTCCAGTATT
ACTAGCCAAATCACACACCCTGGCTTCAAGCAACAATGACATAGACGAGC
TTGCCCCGGAAAGCCACCCTCCAACAGAAGAGACAAAACCAGTCCTCTCA
CCAGCCGAGGACTCCCCAACACCCAAGTTCTGGAGCCACACCATGCTCAA
AAGCCCTGAAGGCAAAAACATTATCGTGCATTACTGCAAGACACTCAAAA
GCAGCGAAGAAGTTGCGCAACTCTTCCTAAATGACAAAATTCTCGGCTTC
GACATGGAATGGAAAGCCCAGGCCTCCGCCTGGAACAGCATCCAAGACAA
CGTATCTCTAATCCAAATCGCAAACAGAGAGCGAATCGCTCTCTTCCACG
TTGCCCTTTTCAGACCAGGCAGAAAGATCAGCGACCTCGTCCCTCCATCG
TTGAAACAAATCATCGAATCCCCAGACATCACAAAGCTCGGTGTATCAAT
CAAAGCAGACTGCACGCGTCTCCGCAAGTACCTCAAGGTCGATGCGCACG
GGATCTTCGAGCTCAGCCACCTCCATAAGCTGGTAAAATACTGCCAGACT
AACCCGAAACTCATCAACAAGCGCCCTGTCAACCTGAGTGAGCAGGTGGA
GGAACATCTGGGGCTCCCGTTGGAGAAGGCGGAAGATGTGAGGTGCAGTG
ATTGGACGGTATCTTTGAGTTATCGTCAGGTCCAATTGAATGCTGCATCC
GATTCTTACGCTTGTATCTGCTTGTTTGATACTATGGATGCGAAACGAAA
GGCTCTCGACCCTCGACCTCCTTTGCCTGCTCATGCGGATTTGGATCTGC
CGATTCGTATTGTGCGAGAGCCGACCGTGACGACGGTCCCGGATGATGTC
GAGATGATTGAGCATATAATCGACAGTAAAGATGTCGGAGAAATCCAGAC
CCCAGAAACTCCAGTATTACTAGCCAAATCACACACCCTGGCTTCAAGCA
ACAATGACATAGACGAGCTTGCCCCGGAAAGCCACCCTCCAACAGAAGAG
ACAAAACCAGTCCTCTCACCAGCCGAGGACTCCCCAACACCCAAGTTCTG
GAGCCACACCATGCTCAAAAGCCCTGAAGGCAAAAACATTATCGTGCATT
ACTGCAAGACACTCAAAAGCAGCGAAGAAGTTGCGCAACTCTTCCTAAAT
GACAAAATTCTCGGCTTCGACATGGAATGGAAAGCCCAGGCCTCCGCCTG
GAACAGCATCCAAGACAACGTATCTCTAATCCAAATCGCAAACAGAGAGC
GAATCGCTCTCTTCCACGTTGCCCTTTTCAGACCAGGCAGAAAGATCAGC
GACCTCGTCCCTCCATCGTTGAAACAAATCATCGAATCCCCAGACATCAC
AAAGCTCGGTGTATCAATCAAAGCAGACTGCACGCGTCTCCGCAAGTACC
TCAAGGTCGATGCGCACGGGATCTTCGAGCTCAGCCACCTCCATAAGCTG
GTAAAATACTGCCAGACTAACCCGAAACTCATCAACAAGCGCCCTGTCAA
CCTGAGTGAGCAGGTGGAGGAACATCTGGGGCTCCCGTTGGAGAAGGCGG
AAGATGTGAGGTGCAGTGATTGGACGGTATCTTTGAGTTATCGTCAGGTC
CAAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006139 | nucleobase-containing compound metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0008408 | 3'-5' exonuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR036397 |
| DBxref | InterPro:IPR002562 |
| DBxref | PFAM:PF01612 |
| Product | 3'-5' exonuclease family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000009.1 | supercontig | NKJJ01000009.1:227935..228960 - |
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