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CAN33_11230-T1, CAN33_11230-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_11230-T1
Unique NameCAN33_11230-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:541225..542229+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_11230-T1 ID=CAN33_11230-T1|Name=CAN33_11230-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1005bp|location=Sequence derived from alignment at NKJJ01000009.1:541225..542229+ (Aspergillus niger FDAARGOS_311)
ATGTCTTCCACCCCCAGCTCCCAGGAGAAACCCCCAACCGCTGAACCAAC
CCTCGTGAGAACAAACACTTCCACAGCAACTCCCAATGACTCCTACCACT
TCGACTTCGGGCCCCTCGCCCACGTCAACACAGCAGGAACCATCTATCCC
GCCTTCGCCGGCGAACTCCAACCCGGTCTCTGGAAGCCCCAGAAGCGTCG
CAAGATCGCCAATCCCGCACCGTTAGGACTATGCGGGTTCGCGCTCACTA
CATTCCTCCTGGGCTGCATCAACATGCAAACTCTGGGAATCGCCACACCG
AACATGATCGTCGGCCCTGCTCTCGCATACGGGGGTCTTGTCCAGCTTCT
CGCGGGCATGTGGTACGTACATACCTCCCCCCAACGGCAATCCAACCTAG
CAACTCAAGTCCCCCATCAATGTCCATGTCCACTAACCAATCAAACCAGG
GAAATGGCCGCCGGGAACACCTTCGGCGCAACCGCACTCTCCTCCTACGG
CGGCTTCTGGATCTCCCTATCCATAGTCTTCACTCCAGGCGGATTCGACA
TCCAGGGCGCCTACAAAGCAGCCGATAATGGCAGCATGGGGATGTTCTAC
GACGCATTCGGATTATACCTAATGGTATTTCACTCTCCACCCAATCATTA
CCACGAAGTACTAATAATAATCCAGGGCTGGTTCATCTTCACCTTCCTCC
TCTGGCTCTGCACGCTCAAATCGACCTACGTCTTCTGCGCCCTCTTCGCG
GCCGTCGATATCGCCCTCCTCCTCCTAGCAGTCGGGTATATCCACCGCAC
TGCGCCAGAGGTTCCCAACGCAAAGATCATTAAAGCCGGTGGGTTGTTTG
CGCTGCTGGGCGCCTTCATGGCTTGGTATGTTGCGTTGGCGGGTATCGCG
GACGATAGTAATAGTTTCTTTCTTGTTCCTGTGTTTCATTTCCCGTGGTC
GGAGAAGGGGAGGGAGTCGAGACGGAAGGACGGGGAGAGTGGGGAGACTG
TTTGA
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Coding sequence (CDS) from alignment at NKJJ01000009.1:541225..542229+

>CAN33_11230-T1 ID=CAN33_11230-T1|Name=CAN33_11230-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2601bp|location=Sequence derived from alignment at NKJJ01000009.1:541225..542229+ (Aspergillus niger FDAARGOS_311)
ATGTCTTCCACCCCCAGCTCCCAGGAGAAACCCCCAACCGCTGAACCAAC
CCTCGTGAGAACAAACACTTCCACAGCAACTCCCAATGACTCCTACCACT
TCGACTTCGGGCCCCTCGCCCACGTCAACACAGCAGGAACCATCTATCCC
GCCTTCGCCGGCGAACTCCAACCCGGTCTCTGGAAGCCCCAGAAGCGTCG
CAAGATCGCCAATCCCGCACCGTTAGGACTATGCGGGTTCGCGCTCACTA
CATTCCTCCTGGGCTGCATCAACATGCAAACTCTGGGAATCGCCACACCG
AACATGATCGTCGGCCCTGCTCTCGCATACGGGGGTCTTGTCCAGCTTCT
CGCGGGCATGTGGGAAATGGCCGCCGGGAACACCTTCGGCGCAACCGCAC
TCTCCTCCTACGGCGGCTTCTGGATCTCCCTATCCATAGTCTTCACTCCA
GGCGGATTCGACATCCAGGGCGCCTACAAAGCAGCCGATAATGGCAGCAT
GGGGATGTTCTACGACGCATTCGGATTATACCTAATGGGCTGGTTCATCT
TCACCTTCCTCCTCTGGCTCTGCACGCTCAAATCGACCTACGTCTTCTGC
GCCCTCTTCGCGGCCGTCGATATCGCCCTCCTCCTCCTAGCAGTCGGGTA
TATCCACCGCACTGCGCCAGAGGTTCCCAACGCAAAGATCATTAAAGCCG
GTGGGTTGTTTGCGCTGCTGGGCGCCTTCATGGCTTGGTATGTTGCGTTG
GCGGGTATCGCGGACGATAGTAATAGTTTCTTTCTTGTTCCTGTGTTTCA
TTTCCCGTGGTCGGAGAAGGGGAGGGAGTCGAGACGGAAGGACGGGGAGA
GTGGGGAGACTGTTTGAATGTCTTCCACCCCCAGCTCCCAGGAGAAACCC
CCAACCGCTGAACCAACCCTCGTGAGAACAAACACTTCCACAGCAACTCC
CAATGACTCCTACCACTTCGACTTCGGGCCCCTCGCCCACGTCAACACAG
CAGGAACCATCTATCCCGCCTTCGCCGGCGAACTCCAACCCGGTCTCTGG
AAGCCCCAGAAGCGTCGCAAGATCGCCAATCCCGCACCGTTAGGACTATG
CGGGTTCGCGCTCACTACATTCCTCCTGGGCTGCATCAACATGCAAACTC
TGGGAATCGCCACACCGAACATGATCGTCGGCCCTGCTCTCGCATACGGG
GGTCTTGTCCAGCTTCTCGCGGGCATGTGGGAAATGGCCGCCGGGAACAC
CTTCGGCGCAACCGCACTCTCCTCCTACGGCGGCTTCTGGATCTCCCTAT
CCATAGTCTTCACTCCAGGCGGATTCGACATCCAGGGCGCCTACAAAGCA
GCCGATAATGGCAGCATGGGGATGTTCTACGACGCATTCGGATTATACCT
AATGGGCTGGTTCATCTTCACCTTCCTCCTCTGGCTCTGCACGCTCAAAT
CGACCTACGTCTTCTGCGCCCTCTTCGCGGCCGTCGATATCGCCCTCCTC
CTCCTAGCAGTCGGGTATATCCACCGCACTGCGCCAGAGGTTCCCAACGC
AAAGATCATTAAAGCCGGTGGGTTGTTTGCGCTGCTGGGCGCCTTCATGG
CTTGGTATGTTGCGTTGGCGGGTATCGCGGACGATAGTAATAGTTTCTTT
CTTGTTCCTGTGTTTCATTTCCCGTGGTCGGAGAAGGGGAGGGAGTCGAG
ACGGAAGGACGGGGAGAGTGGGGAGACTGTTTGAATGTCTTCCACCCCCA
GCTCCCAGGAGAAACCCCCAACCGCTGAACCAACCCTCGTGAGAACAAAC
ACTTCCACAGCAACTCCCAATGACTCCTACCACTTCGACTTCGGGCCCCT
CGCCCACGTCAACACAGCAGGAACCATCTATCCCGCCTTCGCCGGCGAAC
TCCAACCCGGTCTCTGGAAGCCCCAGAAGCGTCGCAAGATCGCCAATCCC
GCACCGTTAGGACTATGCGGGTTCGCGCTCACTACATTCCTCCTGGGCTG
CATCAACATGCAAACTCTGGGAATCGCCACACCGAACATGATCGTCGGCC
CTGCTCTCGCATACGGGGGTCTTGTCCAGCTTCTCGCGGGCATGTGGGAA
ATGGCCGCCGGGAACACCTTCGGCGCAACCGCACTCTCCTCCTACGGCGG
CTTCTGGATCTCCCTATCCATAGTCTTCACTCCAGGCGGATTCGACATCC
AGGGCGCCTACAAAGCAGCCGATAATGGCAGCATGGGGATGTTCTACGAC
GCATTCGGATTATACCTAATGGGCTGGTTCATCTTCACCTTCCTCCTCTG
GCTCTGCACGCTCAAATCGACCTACGTCTTCTGCGCCCTCTTCGCGGCCG
TCGATATCGCCCTCCTCCTCCTAGCAGTCGGGTATATCCACCGCACTGCG
CCAGAGGTTCCCAACGCAAAGATCATTAAAGCCGGTGGGTTGTTTGCGCT
GCTGGGCGCCTTCATGGCTTGGTATGTTGCGTTGGCGGGTATCGCGGACG
ATAGTAATAGTTTCTTTCTTGTTCCTGTGTTTCATTTCCCGTGGTCGGAG
AAGGGGAGGGAGTCGAGACGGAAGGACGGGGAGAGTGGGGAGACTGTTTG
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_11230CAN33_11230Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11230-T1.exon1CAN33_11230-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_11230-T1.exon2CAN33_11230-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_11230-T1.exon3CAN33_11230-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11230-T1.cdsCAN33_11230-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11230-T1CAN33_11230-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000791
DBxrefPFAM:PF01184
ProductGPR1/FUN34/yaaH family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:541225..542229 +
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