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CAN33_12950-T1, CAN33_12950-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12950-T1
Unique NameCAN33_12950-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:484979..485795-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12950-T1 ID=CAN33_12950-T1|Name=CAN33_12950-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=817bp|location=Sequence derived from alignment at NKJJ01000010.1:484979..485795- (Aspergillus niger FDAARGOS_311)
ATGGCGTCCGCAGAAGTCCAGAAAGTGCCCGTTTACTCGGTCAATGGTTA
GTTCGCGCGATAAACATCACTATTACTACATACATCCAAGATATTACTGC
GACGCAATACTTGCTACACTCATAGATCTATGTATTGGTCAACAAAACTC
ACTAATTACTTCATTGAACAGACATAAAATCAACAACCGATGACGCCCTA
GCTCCCTACCTTGGCTCCCTCCCCCAACCCTACACATTCGCCCAAGACCA
CACCAAGACCAATGTCCACCTATTCTTGGGCTATGCTGCCGTCGCAATTG
CCGGCTTCAGCTTCTATGCTGAACGCAAACTCAACTGGGAGGCGACACAT
TCGCCATGGATCATCGCAGCCGTTTTGTCGTACTTTACCTTGAACTCGCT
CCTCACGTACTGGGTTTGGGCTGTCGAGACGGGTGAGGTATTCCATGGGA
AGCGAAAGTCGGGTGAAACGGTACGCTTTTCCTATCACCGAAAGGTGAGT
AAATTTGGTTGCGTGCTAATATTCTATGCTAGATTATCATTCGGTCGTCC
GTGCAGAAGCACTCCCCGTTGTACAAGCTGCAGGTCCAGTATAAGTCGGC
GCAGGGCAAGATGCTGCAGGAGAAGGAGATTGAGACCTCGTTCACTAAGT
GGTTTGCTGCGGATGGGACATTTCATCCCGAGCCGTTGAGGGCCTGGCTG
GCTGGTGAGATCGAGGTTCTGGGGTTGGCAGCCAAGGAAACGCAGAAGAA
GACCGGCGGTGTTGCCAGTTTAGTGGGTGTTGAGGAGGAAAGCAAGGATG
TCAAGAGGAGGAAGTGA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:484979..485795-

>CAN33_12950-T1 ID=CAN33_12950-T1|Name=CAN33_12950-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1890bp|location=Sequence derived from alignment at NKJJ01000010.1:484979..485795- (Aspergillus niger FDAARGOS_311)
ATTATCATTCGGTCGTCCGTGCAGAAGCACTCCCCGTTGTACAAGCTGCA
GGTCCAGTATAAGTCGGCGCAGGGCAAGATGCTGCAGGAGAAGGAGATTG
AGACCTCGTTCACTAAGTGGTTTGCTGCGGATGGGACATTTCATCCCGAG
CCGTTGAGGGCCTGGCTGGCTGGTGAGATCGAGGTTCTGGGGTTGGCAGC
CAAGGAAACGCAGAAGAAGACCGGCGGTGTTGCCAGTTTAGTGGGTGTTG
AGGAGGAAAGCAAGGATGTCAAGAGGAGGAAGTGAACATAAAATCAACAA
CCGATGACGCCCTAGCTCCCTACCTTGGCTCCCTCCCCCAACCCTACACA
TTCGCCCAAGACCACACCAAGACCAATGTCCACCTATTCTTGGGCTATGC
TGCCGTCGCAATTGCCGGCTTCAGCTTCTATGCTGAACGCAAACTCAACT
GGGAGGCGACACATTCGCCATGGATCATCGCAGCCGTTTTGTCGTACTTT
ACCTTGAACTCGCTCCTCACGTACTGGGTTTGGGCTGTCGAGACGGGTGA
GGTATTCCATGGGAAGCGAAAGTCGGGTGAAACGATGGCGTCCGCAGAAG
TCCAGAAAGTGCCCGTTTACTCGGTCAATGATTATCATTCGGTCGTCCGT
GCAGAAGCACTCCCCGTTGTACAAGCTGCAGGTCCAGTATAAGTCGGCGC
AGGGCAAGATGCTGCAGGAGAAGGAGATTGAGACCTCGTTCACTAAGTGG
TTTGCTGCGGATGGGACATTTCATCCCGAGCCGTTGAGGGCCTGGCTGGC
TGGTGAGATCGAGGTTCTGGGGTTGGCAGCCAAGGAAACGCAGAAGAAGA
CCGGCGGTGTTGCCAGTTTAGTGGGTGTTGAGGAGGAAAGCAAGGATGTC
AAGAGGAGGAAGTGAACATAAAATCAACAACCGATGACGCCCTAGCTCCC
TACCTTGGCTCCCTCCCCCAACCCTACACATTCGCCCAAGACCACACCAA
GACCAATGTCCACCTATTCTTGGGCTATGCTGCCGTCGCAATTGCCGGCT
TCAGCTTCTATGCTGAACGCAAACTCAACTGGGAGGCGACACATTCGCCA
TGGATCATCGCAGCCGTTTTGTCGTACTTTACCTTGAACTCGCTCCTCAC
GTACTGGGTTTGGGCTGTCGAGACGGGTGAGGTATTCCATGGGAAGCGAA
AGTCGGGTGAAACGATGGCGTCCGCAGAAGTCCAGAAAGTGCCCGTTTAC
TCGGTCAATGATTATCATTCGGTCGTCCGTGCAGAAGCACTCCCCGTTGT
ACAAGCTGCAGGTCCAGTATAAGTCGGCGCAGGGCAAGATGCTGCAGGAG
AAGGAGATTGAGACCTCGTTCACTAAGTGGTTTGCTGCGGATGGGACATT
TCATCCCGAGCCGTTGAGGGCCTGGCTGGCTGGTGAGATCGAGGTTCTGG
GGTTGGCAGCCAAGGAAACGCAGAAGAAGACCGGCGGTGTTGCCAGTTTA
GTGGGTGTTGAGGAGGAAAGCAAGGATGTCAAGAGGAGGAAGTGAACATA
AAATCAACAACCGATGACGCCCTAGCTCCCTACCTTGGCTCCCTCCCCCA
ACCCTACACATTCGCCCAAGACCACACCAAGACCAATGTCCACCTATTCT
TGGGCTATGCTGCCGTCGCAATTGCCGGCTTCAGCTTCTATGCTGAACGC
AAACTCAACTGGGAGGCGACACATTCGCCATGGATCATCGCAGCCGTTTT
GTCGTACTTTACCTTGAACTCGCTCCTCACGTACTGGGTTTGGGCTGTCG
AGACGGGTGAGGTATTCCATGGGAAGCGAAAGTCGGGTGAAACGATGGCG
TCCGCAGAAGTCCAGAAAGTGCCCGTTTACTCGGTCAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005787signal peptidase complex
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006465signal peptide processing
Vocabulary: Molecular Function
TermDefinition
GO:0008233peptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_12950CAN33_12950Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12950-T1CAN33_12950-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12950-T1.cdsCAN33_12950-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12950-T1.exon3CAN33_12950-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_12950-T1.exon2CAN33_12950-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_12950-T1.exon1CAN33_12950-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09265B95
DBxrefInterPro:IPR009582
DBxrefPFAM:PF06703
ProductMicrosomal signal peptidase 25 kDa subunit (SPC25) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:484979..485795 -
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