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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:919243..920467- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_13570-T1 ID=CAN33_13570-T1|Name=CAN33_13570-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1225bp|location=Sequence derived from alignment at NKJJ01000010.1:919243..920467- (Aspergillus niger FDAARGOS_311)
ATGACCGACCTCACCCCAACATTCTCCGAGCTGCTGCGCAGCAAATCCCC
TTCTTCGAAACTCTCCACAGGCTACATGACCACCGAAATCGCCGACGAAT
TCCTCAAAGAAGCCTACCGAATTGTACTTCCCACCATCATTACCCTCCAC
CCTCACTCAGATACTAACAACCATCCCAATTAAATTAAACAGAATAACCA
TATAACATCCTTACTATCCTACCTCCACACAATCCGCCCTCCTACCTCTC
CCTCACCACAAAACCCACCACCAAACAACAACACCAACACCAACAACCAG
AGATCCTAGACGACACCGCCCGCGACACCATCACCACCACCACCTCGACC
CTCCTATCCAACCTCTCCACCTCAATCACGACCCTCAGCGCAGCGGAGAA
TCTCCGCCAGGAAACCGTCTCTAGAAGCATCACGCAGCGGTTCGGGAAGG
GGCTGTTAGCGAAGTGGGCGGGGGGCGCGACACTCACCTCTGGGAATAAT
GATGAGGGAAAGGAGGAAGAACAGATCGTGGAAGAAGAGAAGGAGAAGGT
GTTGAAGGGGGTGAGGGAGAGTGTGCTCTTCTATCTGAGGATTAAGTTGG
GAGGGGTGGTTAATGAGCAGAGGGATATGGTTGAGAAGAGGATTGAGAGG
GTTAGGGAGAGGGAGAGGAGTGTTTTGTATAAATCAAGTGGTGGTAAGGG
TGGATGGGGGAGTGTGGATGGGGGAGAGTGGAGGGGTGATGTTGCTGGAG
GTGGTACTACTACGGGAAGTGTGATGATGGATGAGAGTGAAGTCAAGGAG
ATCGAGAAGCAGCTGACCCTCAGCAATTGCAGCTCTTTGAGGAGGAGAAT
GATTCCATGGTCAAGTATTTTGAGGATGTGGTGGGGAAGGTTCAGTATGA
TATTTTACCCTTATCCTTTTCTTTCATATGTTACCTGTTACGAAGGGGAT
ATGGCTAATGAGTATGGTTGTGGGTTATGTGTAGGAACGCAGAGAAATCT
CTCCTTGAGATATCCTCCCTCCAGCAGACGCTCGTGTCGCATTTGTCTAC
ACAGGAGGAGTATATTTCGCAGCTTGTGACGGATGCGAGCAATACGGAAG
CGAATATCGGGCAGGGAAATAAGGAGTTGAAGCGCGCGACGGAGAGACGC
AGTACCGCGCAGGTGGTGTTTTGGGGGACTGTGGGGTTGTGTACGTGGTT
GGTTGTTTGGGATTTGGTTCTTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:919243..920467- >CAN33_13570-T1 ID=CAN33_13570-T1|Name=CAN33_13570-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2736bp|location=Sequence derived from alignment at NKJJ01000010.1:919243..920467- (Aspergillus niger FDAARGOS_311)
GAACGCAGAGAAATCTCTCCTTGAGATATCCTCCCTCCAGCAGACGCTCG
TGTCGCATTTGTCTACACAGGAGGAGTATATTTCGCAGCTTGTGACGGAT
GCGAGCAATACGGAAGCGAATATCGGGCAGGGAAATAAGGAGTTGAAGCG
CGCGACGGAGAGACGCAGTACCGCGCAGGTGGTGTTTTGGGGGACTGTGG
GGTTGTGTACGTGGTTGGTTGTTTGGGATTTGGTTCTTTAGCTCTTTGAG
GAGGAGAATGATTCCATGGTCAAGTATTTTGAGGATGTGGTGGGGAAGGT
TCAATCCTAGACGACACCGCCCGCGACACCATCACCACCACCACCTCGAC
CCTCCTATCCAACCTCTCCACCTCAATCACGACCCTCAGCGCAGCGGAGA
ATCTCCGCCAGGAAACCGTCTCTAGAAGCATCACGCAGCGGTTCGGGAAG
GGGCTGTTAGCGAAGTGGGCGGGGGGCGCGACACTCACCTCTGGGAATAA
TGATGAGGGAAAGGAGGAAGAACAGATCGTGGAAGAAGAGAAGGAGAAGG
TGTTGAAGGGGATGACCGACCTCACCCCAACATTCTCCGAGCTGCTGCGC
AGCAAATCCCCTTCTTCGAAACTCTCCACAGGCTACATGACCACCGAAAT
CGCCGACGAATTCCTCAAAGAAGCCTACCGAATTGAACGCAGAGAAATCT
CTCCTTGAGATATCCTCCCTCCAGCAGACGCTCGTGTCGCATTTGTCTAC
ACAGGAGGAGTATATTTCGCAGCTTGTGACGGATGCGAGCAATACGGAAG
CGAATATCGGGCAGGGAAATAAGGAGTTGAAGCGCGCGACGGAGAGACGC
AGTACCGCGCAGGTGGTGTTTTGGGGGACTGTGGGGTTGTGTACGTGGTT
GGTTGTTTGGGATTTGGTTCTTTAGCTCTTTGAGGAGGAGAATGATTCCA
TGGTCAAGTATTTTGAGGATGTGGTGGGGAAGGTTCAATCCTAGACGACA
CCGCCCGCGACACCATCACCACCACCACCTCGACCCTCCTATCCAACCTC
TCCACCTCAATCACGACCCTCAGCGCAGCGGAGAATCTCCGCCAGGAAAC
CGTCTCTAGAAGCATCACGCAGCGGTTCGGGAAGGGGCTGTTAGCGAAGT
GGGCGGGGGGCGCGACACTCACCTCTGGGAATAATGATGAGGGAAAGGAG
GAAGAACAGATCGTGGAAGAAGAGAAGGAGAAGGTGTTGAAGGGGATGAC
CGACCTCACCCCAACATTCTCCGAGCTGCTGCGCAGCAAATCCCCTTCTT
CGAAACTCTCCACAGGCTACATGACCACCGAAATCGCCGACGAATTCCTC
AAAGAAGCCTACCGAATTGAACGCAGAGAAATCTCTCCTTGAGATATCCT
CCCTCCAGCAGACGCTCGTGTCGCATTTGTCTACACAGGAGGAGTATATT
TCGCAGCTTGTGACGGATGCGAGCAATACGGAAGCGAATATCGGGCAGGG
AAATAAGGAGTTGAAGCGCGCGACGGAGAGACGCAGTACCGCGCAGGTGG
TGTTTTGGGGGACTGTGGGGTTGTGTACGTGGTTGGTTGTTTGGGATTTG
GTTCTTTAGCTCTTTGAGGAGGAGAATGATTCCATGGTCAAGTATTTTGA
GGATGTGGTGGGGAAGGTTCAATCCTAGACGACACCGCCCGCGACACCAT
CACCACCACCACCTCGACCCTCCTATCCAACCTCTCCACCTCAATCACGA
CCCTCAGCGCAGCGGAGAATCTCCGCCAGGAAACCGTCTCTAGAAGCATC
ACGCAGCGGTTCGGGAAGGGGCTGTTAGCGAAGTGGGCGGGGGGCGCGAC
ACTCACCTCTGGGAATAATGATGAGGGAAAGGAGGAAGAACAGATCGTGG
AAGAAGAGAAGGAGAAGGTGTTGAAGGGGATGACCGACCTCACCCCAACA
TTCTCCGAGCTGCTGCGCAGCAAATCCCCTTCTTCGAAACTCTCCACAGG
CTACATGACCACCGAAATCGCCGACGAATTCCTCAAAGAAGCCTACCGAA
TTGAACGCAGAGAAATCTCTCCTTGAGATATCCTCCCTCCAGCAGACGCT
CGTGTCGCATTTGTCTACACAGGAGGAGTATATTTCGCAGCTTGTGACGG
ATGCGAGCAATACGGAAGCGAATATCGGGCAGGGAAATAAGGAGTTGAAG
CGCGCGACGGAGAGACGCAGTACCGCGCAGGTGGTGTTTTGGGGGACTGT
GGGGTTGTGTACGTGGTTGGTTGTTTGGGATTTGGTTCTTTAGCTCTTTG
AGGAGGAGAATGATTCCATGGTCAAGTATTTTGAGGATGTGGTGGGGAAG
GTTCAATCCTAGACGACACCGCCCGCGACACCATCACCACCACCACCTCG
ACCCTCCTATCCAACCTCTCCACCTCAATCACGACCCTCAGCGCAGCGGA
GAATCTCCGCCAGGAAACCGTCTCTAGAAGCATCACGCAGCGGTTCGGGA
AGGGGCTGTTAGCGAAGTGGGCGGGGGGCGCGACACTCACCTCTGGGAAT
AATGATGAGGGAAAGGAGGAAGAACAGATCGTGGAAGAAGAGAAGGAGAA
GGTGTTGAAGGGGATGACCGACCTCACCCCAACATTCTCCGAGCTGCTGC
GCAGCAAATCCCCTTCTTCGAAACTCTCCACAGGCTACATGACCACCGAA
ATCGCCGACGAATTCCTCAAAGAAGCCTACCGAATT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000727 |
| Product | SNARE-complex protein Syntaxin-18 N-terminus family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:919243..920467 - |
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