You are here

Home

CAN33_14340-T1, CAN33_14340-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_14340-T1
Unique NameCAN33_14340-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1404830..1405319+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_14340-T1 ID=CAN33_14340-T1|Name=CAN33_14340-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=490bp|location=Sequence derived from alignment at NKJJ01000010.1:1404830..1405319+ (Aspergillus niger FDAARGOS_311)
ATGGGCTGGCTTCCCTGGTCCTCCGACTCTTCCAACACCGCCTCCGACGG
TGGCCGCATAGCTCCCGATCGAACCTCCCGCCAACGATGCTACGAGGGCC
GCGACATGTTCTTTTCCTGCCTCGACCGGAATGATATCTTAGATGCAATC
AAGGATGACAAGGAGGCGCGTCGGAAGTGTGGAAAGGAGATTGCAGAGTT
TGAGACGGCTTGCTCGAGGGCGTGGGTATGTGTTTCTTGCCTTGTTCATT
GCGAGCTTTGGTTTTCGCTTATTGCTGGGGCTCGCTGCGGCATGAGATAA
GAAATTCCTGATTGTTTCATCTCTTAGTTTTGAAATTTGAAGCTAATCGT
ATACTGTGGATTGACAGGTCAAATATTTCAAGGAGAAGCGCGTGATGGAG
TATAACCGGGACAAGACAATTGAGCGGATTAAGAAGGAGGATGCGGCCCA
GGTTCAAGAATTGAAAGCACAGGGGTGGAACTCCCGGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:1404830..1405319+

>CAN33_14340-T1 ID=CAN33_14340-T1|Name=CAN33_14340-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=696bp|location=Sequence derived from alignment at NKJJ01000010.1:1404830..1405319+ (Aspergillus niger FDAARGOS_311)
ATGGGCTGGCTTCCCTGGTCCTCCGACTCTTCCAACACCGCCTCCGACGG
TGGCCGCATAGCTCCCGATCGAACCTCCCGCCAACGATGCTACGAGGGCC
GCGACATGTTCTTTTCCTGCCTCGACCGGAATGATATCTTAGATGCAATC
AAGGATGACAAGGAGGCGCGTCGGAAGTGTGGAAAGGAGATTGCAGAGTT
TGAGACGGCTTGCTCGAGGGCGTGGGTCAAATATTTCAAGGAGAAGCGCG
TGATGGAGTATAACCGGGACAAGACAATTGAGCGGATTAAGAAGGAGGAT
GCGGCCCAGGTTCAAGAATTGAAAGCACAGGGGTGGAACTCCCGGTAAAT
GGGCTGGCTTCCCTGGTCCTCCGACTCTTCCAACACCGCCTCCGACGGTG
GCCGCATAGCTCCCGATCGAACCTCCCGCCAACGATGCTACGAGGGCCGC
GACATGTTCTTTTCCTGCCTCGACCGGAATGATATCTTAGATGCAATCAA
GGATGACAAGGAGGCGCGTCGGAAGTGTGGAAAGGAGATTGCAGAGTTTG
AGACGGCTTGCTCGAGGGCGTGGGTCAAATATTTCAAGGAGAAGCGCGTG
ATGGAGTATAACCGGGACAAGACAATTGAGCGGATTAAGAAGGAGGATGC
GGCCCAGGTTCAAGAATTGAAAGCACAGGGGTGGAACTCCCGGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_14340CAN33_14340Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14340-T1.exon1CAN33_14340-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_14340-T1.exon2CAN33_14340-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14340-T1.cdsCAN33_14340-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14340-T1CAN33_14340-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265GYD
DBxrefInterPro:IPR036549
DBxrefInterPro:IPR003213
DBxrefPFAM:PF02297
ProductCytochrome oxidase c subunit VIb family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1404830..1405319 +
Powered by Drupal