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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:252824..254935+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_16555-T1 ID=CAN33_16555-T1|Name=CAN33_16555-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2112bp|location=Sequence derived from alignment at NKJJ01000011.1:252824..254935+ (Aspergillus niger FDAARGOS_311)
ATGGCCGATGTTACGCAGGGGACCTCGCGTGGCGTTCGGAAACCTCGCAA
ATCCCGCGGCCGTGGATTGCGGGCCACCACTGGCTGGTCAGTGACCAATC
CTCCGAATTTCTTTTAGTGCTAGTATTCCTTCTGCTGGACGGACCTGCTG
ACTGCCACAGCCTGATTTGCAAGCGTCGCCATGTCAAGTGTGATGAGGTA
CGGCAACTTAGCGAAACGTTCTTTCGCAAAAAATATTTCCTGCTGACTCG
GACGCAGGCTCGCCCACAATGCGGCCCTTGCGCCAAAGGCCAACGCGACT
GTGTTTATGGGAGCAGCTATGAATCTGGAACTCCTAGTATAGGGGCTAAG
CAAACAACCATCCCAGTGCACTCCTCTCCTTCATCACAATTGACTCCACA
GGTGCAGCTACACGAGCCCCTGCAAGTCTTGGTAGATGTCTGCCAACATG
AAGACGCTTCCACTCACCGAGCGTCGGCTACGGCATCTCCAAGGGGCCAA
CACAGCAGTGTGCCGCCTCAGATTAGTCTACATCAACACAGCCATGTCTC
TCCTTCGGCCTCAATCCACGACTTCGCACCATCTCCGGCTACAGATTCCT
CGGTATCGACGAGAATTGCTCCTTTGAGTTGGTTCGAGCTTCTGGCCAAC
GATGCTGTCAATGCGGACCGGAATTTTTTCCTATCATCACCGCATCGAGA
CGTGAATCCTGCTTGCCAGGGATCAACAACCCATCTATCGGTCGCAACCC
TGCGACCTCACAATGTTAGGGAATGTCAAAGCTTTCAAGCCGCTTCTTTT
GAACGTGATCCGGATATCGAGAAGAGAATATCGCCTGCAGCTGATGGCCA
TCCAAAGCTTCCCGATGCTCCGTCCTCTTGGTGTACTGCCGCGCCCATTC
AGTTATCGGAACAAGAACACCTCATGTTCAAACACTTTGTACGGAACATG
TCTAGTTGGTATGATTTCTTTGACCCAACGCAACAGATTTCGAGTAAGGT
TCCACAATTGGCAATGAGAAACATAGGTGTAATGAAGGCCCTTCTGGCCC
TCTCGGCACGCCATCTTTCCATCTGGCATACCTACAAAGGCTCAGGGCTT
GTTCCATCCCGGGAAGATGGAAGAAGAATGATGGATTTCCCAGATGTCGA
TCGCAACATTGCAGTCCAGTATTACTACGAGACCCTGCAGTACCTCAACA
AGGCTATGCAGTATCCCAGCTACGCATACAGCCACGAGATCATTACCACG
TCACTCCTGATCAGCACATACGAAATGGTGGATGGATCCAATCGCGACTG
GGAGCGGCATCTGAAAGGGGTATTCTGGATTCAAAGGTACCAAAACAACG
ATGGAGAATGTGGGGGGTTGCGTCAAGCCATCTGGTGGGCATGGCTGCGG
CAGGATGTCTGGGTAGCAATGCGGGAGCGACGTCGAGTCTTCAGCTTCTG
GAAGCCCAAGCGACACATCTCCTCGCTGTCCCCGACGGAGCTGGCCGGCT
TCGTTTCATACATCCTTGGACAATGCGTCAACTATGCCTCGCGTGAAGAG
GCAGCATCTAAAGACATACAGAGTCGATTGGAGAGGGGCAATGAGCTCCT
CTACATGCTGCAGGAATGGCAGGATTATTTGCCACCGGAGTTCAATCCAC
TCCCTTGTGAGCAGGACGCGACCGTCTTTCCACCGATCTGGGTCCATCCG
CCCCCATATGCAGCGGCATTGCAAATACAAAGCTTAGCTAGAATTCTGGT
ATTATCACACCGTCCGACTGTGAACGGGTTCCAAGATTACCGTGCTGCTC
AAAAGCTGCTTACTACGTCAGTGAACACAATATGTGGCATTGCTCGAACT
ATAAGCGAGGACAACGTCGCTGCCAGCCTTATGTCACTGTATTGTATATA
TGGGGGTAAGAAGGGTCTTTTGTTGTCGTGGTATGATTCTTTGCTGACCC
TTTTCTGCAGCTGGGATGAGCGTTCATACCCCTCACGAGCGGGCAGCATT
GCTCGAATTAATCGATATTTTCGAGAGCAGAGTCTGTTGGCCTAGATATT
CATTACGCAACGACCTCGAATCAGAATACCGTAAGGATGGCCTTTCTGGT
TTCACGACCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:252824..254935+ >CAN33_16555-T1 ID=CAN33_16555-T1|Name=CAN33_16555-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7692bp|location=Sequence derived from alignment at NKJJ01000011.1:252824..254935+ (Aspergillus niger FDAARGOS_311)
ATGGCCGATGTTACGCAGGGGACCTCGCGTGGCGTTCGGAAACCTCGCAA
ATCCCGCGGCCGTGGATTGCGGGCCACCACTGGCTGCCTGATTTGCAAGC
GTCGCCATGTCAAGTGTGATGAGGCTCGCCCACAATGCGGCCCTTGCGCC
AAAGGCCAACGCGACTGTGTTTATGGGAGCAGCTATGAATCTGGAACTCC
TAGTATAGGGGCTAAGCAAACAACCATCCCAGTGCACTCCTCTCCTTCAT
CACAATTGACTCCACAGGTGCAGCTACACGAGCCCCTGCAAGTCTTGGTA
GATGTCTGCCAACATGAAGACGCTTCCACTCACCGAGCGTCGGCTACGGC
ATCTCCAAGGGGCCAACACAGCAGTGTGCCGCCTCAGATTAGTCTACATC
AACACAGCCATGTCTCTCCTTCGGCCTCAATCCACGACTTCGCACCATCT
CCGGCTACAGATTCCTCGGTATCGACGAGAATTGCTCCTTTGAGTTGGTT
CGAGCTTCTGGCCAACGATGCTGTCAATGCGGACCGGAATTTTTTCCTAT
CATCACCGCATCGAGACGTGAATCCTGCTTGCCAGGGATCAACAACCCAT
CTATCGGTCGCAACCCTGCGACCTCACAATGTTAGGGAATGTCAAAGCTT
TCAAGCCGCTTCTTTTGAACGTGATCCGGATATCGAGAAGAGAATATCGC
CTGCAGCTGATGGCCATCCAAAGCTTCCCGATGCTCCGTCCTCTTGGTGT
ACTGCCGCGCCCATTCAGTTATCGGAACAAGAACACCTCATGTTCAAACA
CTTTGTACGGAACATGTCTAGTTGGTATGATTTCTTTGACCCAACGCAAC
AGATTTCGAGTAAGGTTCCACAATTGGCAATGAGAAACATAGGTGTAATG
AAGGCCCTTCTGGCCCTCTCGGCACGCCATCTTTCCATCTGGCATACCTA
CAAAGGCTCAGGGCTTGTTCCATCCCGGGAAGATGGAAGAAGAATGATGG
ATTTCCCAGATGTCGATCGCAACATTGCAGTCCAGTATTACTACGAGACC
CTGCAGTACCTCAACAAGGCTATGCAGTATCCCAGCTACGCATACAGCCA
CGAGATCATTACCACGTCACTCCTGATCAGCACATACGAAATGGTGGATG
GATCCAATCGCGACTGGGAGCGGCATCTGAAAGGGGTATTCTGGATTCAA
AGGTACCAAAACAACGATGGAGAATGTGGGGGGTTGCGTCAAGCCATCTG
GTGGGCATGGCTGCGGCAGGATGTCTGGGTAGCAATGCGGGAGCGACGTC
GAGTCTTCAGCTTCTGGAAGCCCAAGCGACACATCTCCTCGCTGTCCCCG
ACGGAGCTGGCCGGCTTCGTTTCATACATCCTTGGACAATGCGTCAACTA
TGCCTCGCGTGAAGAGGCAGCATCTAAAGACATACAGAGTCGATTGGAGA
GGGGCAATGAGCTCCTCTACATGCTGCAGGAATGGCAGGATTATTTGCCA
CCGGAGTTCAATCCACTCCCTTGTGAGCAGGACGCGACCGTCTTTCCACC
GATCTGGGTCCATCCGCCCCCATATGCAGCGGCATTGCAAATACAAAGCT
TAGCTAGAATTCTGGTATTATCACACCGTCCGACTGTGAACGGGTTCCAA
GATTACCGTGCTGCTCAAAAGCTGCTTACTACGTCAGTGAACACAATATG
TGGCATTGCTCGAACTATAAGCGAGGACAACGTCGCTGCCAGCCTTATGT
CACTGTATTGTATATATGGGGCTGGGATGAGCGTTCATACCCCTCACGAG
CGGGCAGCATTGCTCGAATTAATCGATATTTTCGAGAGCAGAGTCTGTTG
GCCTAGATATTCATTACGCAACGACCTCGAATCAGAATACCGTAAGGATG
GCCTTTCTGGTTTCACGACCTAGATGGCCGATGTTACGCAGGGGACCTCG
CGTGGCGTTCGGAAACCTCGCAAATCCCGCGGCCGTGGATTGCGGGCCAC
CACTGGCTGCCTGATTTGCAAGCGTCGCCATGTCAAGTGTGATGAGGCTC
GCCCACAATGCGGCCCTTGCGCCAAAGGCCAACGCGACTGTGTTTATGGG
AGCAGCTATGAATCTGGAACTCCTAGTATAGGGGCTAAGCAAACAACCAT
CCCAGTGCACTCCTCTCCTTCATCACAATTGACTCCACAGGTGCAGCTAC
ACGAGCCCCTGCAAGTCTTGGTAGATGTCTGCCAACATGAAGACGCTTCC
ACTCACCGAGCGTCGGCTACGGCATCTCCAAGGGGCCAACACAGCAGTGT
GCCGCCTCAGATTAGTCTACATCAACACAGCCATGTCTCTCCTTCGGCCT
CAATCCACGACTTCGCACCATCTCCGGCTACAGATTCCTCGGTATCGACG
AGAATTGCTCCTTTGAGTTGGTTCGAGCTTCTGGCCAACGATGCTGTCAA
TGCGGACCGGAATTTTTTCCTATCATCACCGCATCGAGACGTGAATCCTG
CTTGCCAGGGATCAACAACCCATCTATCGGTCGCAACCCTGCGACCTCAC
AATGTTAGGGAATGTCAAAGCTTTCAAGCCGCTTCTTTTGAACGTGATCC
GGATATCGAGAAGAGAATATCGCCTGCAGCTGATGGCCATCCAAAGCTTC
CCGATGCTCCGTCCTCTTGGTGTACTGCCGCGCCCATTCAGTTATCGGAA
CAAGAACACCTCATGTTCAAACACTTTGTACGGAACATGTCTAGTTGGTA
TGATTTCTTTGACCCAACGCAACAGATTTCGAGTAAGGTTCCACAATTGG
CAATGAGAAACATAGGTGTAATGAAGGCCCTTCTGGCCCTCTCGGCACGC
CATCTTTCCATCTGGCATACCTACAAAGGCTCAGGGCTTGTTCCATCCCG
GGAAGATGGAAGAAGAATGATGGATTTCCCAGATGTCGATCGCAACATTG
CAGTCCAGTATTACTACGAGACCCTGCAGTACCTCAACAAGGCTATGCAG
TATCCCAGCTACGCATACAGCCACGAGATCATTACCACGTCACTCCTGAT
CAGCACATACGAAATGGTGGATGGATCCAATCGCGACTGGGAGCGGCATC
TGAAAGGGGTATTCTGGATTCAAAGGTACCAAAACAACGATGGAGAATGT
GGGGGGTTGCGTCAAGCCATCTGGTGGGCATGGCTGCGGCAGGATGTCTG
GGTAGCAATGCGGGAGCGACGTCGAGTCTTCAGCTTCTGGAAGCCCAAGC
GACACATCTCCTCGCTGTCCCCGACGGAGCTGGCCGGCTTCGTTTCATAC
ATCCTTGGACAATGCGTCAACTATGCCTCGCGTGAAGAGGCAGCATCTAA
AGACATACAGAGTCGATTGGAGAGGGGCAATGAGCTCCTCTACATGCTGC
AGGAATGGCAGGATTATTTGCCACCGGAGTTCAATCCACTCCCTTGTGAG
CAGGACGCGACCGTCTTTCCACCGATCTGGGTCCATCCGCCCCCATATGC
AGCGGCATTGCAAATACAAAGCTTAGCTAGAATTCTGGTATTATCACACC
GTCCGACTGTGAACGGGTTCCAAGATTACCGTGCTGCTCAAAAGCTGCTT
ACTACGTCAGTGAACACAATATGTGGCATTGCTCGAACTATAAGCGAGGA
CAACGTCGCTGCCAGCCTTATGTCACTGTATTGTATATATGGGGCTGGGA
TGAGCGTTCATACCCCTCACGAGCGGGCAGCATTGCTCGAATTAATCGAT
ATTTTCGAGAGCAGAGTCTGTTGGCCTAGATATTCATTACGCAACGACCT
CGAATCAGAATACCGTAAGGATGGCCTTTCTGGTTTCACGACCTAGATGG
CCGATGTTACGCAGGGGACCTCGCGTGGCGTTCGGAAACCTCGCAAATCC
CGCGGCCGTGGATTGCGGGCCACCACTGGCTGCCTGATTTGCAAGCGTCG
CCATGTCAAGTGTGATGAGGCTCGCCCACAATGCGGCCCTTGCGCCAAAG
GCCAACGCGACTGTGTTTATGGGAGCAGCTATGAATCTGGAACTCCTAGT
ATAGGGGCTAAGCAAACAACCATCCCAGTGCACTCCTCTCCTTCATCACA
ATTGACTCCACAGGTGCAGCTACACGAGCCCCTGCAAGTCTTGGTAGATG
TCTGCCAACATGAAGACGCTTCCACTCACCGAGCGTCGGCTACGGCATCT
CCAAGGGGCCAACACAGCAGTGTGCCGCCTCAGATTAGTCTACATCAACA
CAGCCATGTCTCTCCTTCGGCCTCAATCCACGACTTCGCACCATCTCCGG
CTACAGATTCCTCGGTATCGACGAGAATTGCTCCTTTGAGTTGGTTCGAG
CTTCTGGCCAACGATGCTGTCAATGCGGACCGGAATTTTTTCCTATCATC
ACCGCATCGAGACGTGAATCCTGCTTGCCAGGGATCAACAACCCATCTAT
CGGTCGCAACCCTGCGACCTCACAATGTTAGGGAATGTCAAAGCTTTCAA
GCCGCTTCTTTTGAACGTGATCCGGATATCGAGAAGAGAATATCGCCTGC
AGCTGATGGCCATCCAAAGCTTCCCGATGCTCCGTCCTCTTGGTGTACTG
CCGCGCCCATTCAGTTATCGGAACAAGAACACCTCATGTTCAAACACTTT
GTACGGAACATGTCTAGTTGGTATGATTTCTTTGACCCAACGCAACAGAT
TTCGAGTAAGGTTCCACAATTGGCAATGAGAAACATAGGTGTAATGAAGG
CCCTTCTGGCCCTCTCGGCACGCCATCTTTCCATCTGGCATACCTACAAA
GGCTCAGGGCTTGTTCCATCCCGGGAAGATGGAAGAAGAATGATGGATTT
CCCAGATGTCGATCGCAACATTGCAGTCCAGTATTACTACGAGACCCTGC
AGTACCTCAACAAGGCTATGCAGTATCCCAGCTACGCATACAGCCACGAG
ATCATTACCACGTCACTCCTGATCAGCACATACGAAATGGTGGATGGATC
CAATCGCGACTGGGAGCGGCATCTGAAAGGGGTATTCTGGATTCAAAGGT
ACCAAAACAACGATGGAGAATGTGGGGGGTTGCGTCAAGCCATCTGGTGG
GCATGGCTGCGGCAGGATGTCTGGGTAGCAATGCGGGAGCGACGTCGAGT
CTTCAGCTTCTGGAAGCCCAAGCGACACATCTCCTCGCTGTCCCCGACGG
AGCTGGCCGGCTTCGTTTCATACATCCTTGGACAATGCGTCAACTATGCC
TCGCGTGAAGAGGCAGCATCTAAAGACATACAGAGTCGATTGGAGAGGGG
CAATGAGCTCCTCTACATGCTGCAGGAATGGCAGGATTATTTGCCACCGG
AGTTCAATCCACTCCCTTGTGAGCAGGACGCGACCGTCTTTCCACCGATC
TGGGTCCATCCGCCCCCATATGCAGCGGCATTGCAAATACAAAGCTTAGC
TAGAATTCTGGTATTATCACACCGTCCGACTGTGAACGGGTTCCAAGATT
ACCGTGCTGCTCAAAAGCTGCTTACTACGTCAGTGAACACAATATGTGGC
ATTGCTCGAACTATAAGCGAGGACAACGTCGCTGCCAGCCTTATGTCACT
GTATTGTATATATGGGGCTGGGATGAGCGTTCATACCCCTCACGAGCGGG
CAGCATTGCTCGAATTAATCGATATTTTCGAGAGCAGAGTCTGTTGGCCT
AGATATTCATTACGCAACGACCTCGAATCAGAATACCGTAAGGATGGCCT
TTCTGGTTTCACGACCTAGATGGCCGATGTTACGCAGGGGACCTCGCGTG
GCGTTCGGAAACCTCGCAAATCCCGCGGCCGTGGATTGCGGGCCACCACT
GGCTGCCTGATTTGCAAGCGTCGCCATGTCAAGTGTGATGAGGCTCGCCC
ACAATGCGGCCCTTGCGCCAAAGGCCAACGCGACTGTGTTTATGGGAGCA
GCTATGAATCTGGAACTCCTAGTATAGGGGCTAAGCAAACAACCATCCCA
GTGCACTCCTCTCCTTCATCACAATTGACTCCACAGGTGCAGCTACACGA
GCCCCTGCAAGTCTTGGTAGATGTCTGCCAACATGAAGACGCTTCCACTC
ACCGAGCGTCGGCTACGGCATCTCCAAGGGGCCAACACAGCAGTGTGCCG
CCTCAGATTAGTCTACATCAACACAGCCATGTCTCTCCTTCGGCCTCAAT
CCACGACTTCGCACCATCTCCGGCTACAGATTCCTCGGTATCGACGAGAA
TTGCTCCTTTGAGTTGGTTCGAGCTTCTGGCCAACGATGCTGTCAATGCG
GACCGGAATTTTTTCCTATCATCACCGCATCGAGACGTGAATCCTGCTTG
CCAGGGATCAACAACCCATCTATCGGTCGCAACCCTGCGACCTCACAATG
TTAGGGAATGTCAAAGCTTTCAAGCCGCTTCTTTTGAACGTGATCCGGAT
ATCGAGAAGAGAATATCGCCTGCAGCTGATGGCCATCCAAAGCTTCCCGA
TGCTCCGTCCTCTTGGTGTACTGCCGCGCCCATTCAGTTATCGGAACAAG
AACACCTCATGTTCAAACACTTTGTACGGAACATGTCTAGTTGGTATGAT
TTCTTTGACCCAACGCAACAGATTTCGAGTAAGGTTCCACAATTGGCAAT
GAGAAACATAGGTGTAATGAAGGCCCTTCTGGCCCTCTCGGCACGCCATC
TTTCCATCTGGCATACCTACAAAGGCTCAGGGCTTGTTCCATCCCGGGAA
GATGGAAGAAGAATGATGGATTTCCCAGATGTCGATCGCAACATTGCAGT
CCAGTATTACTACGAGACCCTGCAGTACCTCAACAAGGCTATGCAGTATC
CCAGCTACGCATACAGCCACGAGATCATTACCACGTCACTCCTGATCAGC
ACATACGAAATGGTGGATGGATCCAATCGCGACTGGGAGCGGCATCTGAA
AGGGGTATTCTGGATTCAAAGGTACCAAAACAACGATGGAGAATGTGGGG
GGTTGCGTCAAGCCATCTGGTGGGCATGGCTGCGGCAGGATGTCTGGGTA
GCAATGCGGGAGCGACGTCGAGTCTTCAGCTTCTGGAAGCCCAAGCGACA
CATCTCCTCGCTGTCCCCGACGGAGCTGGCCGGCTTCGTTTCATACATCC
TTGGACAATGCGTCAACTATGCCTCGCGTGAAGAGGCAGCATCTAAAGAC
ATACAGAGTCGATTGGAGAGGGGCAATGAGCTCCTCTACATGCTGCAGGA
ATGGCAGGATTATTTGCCACCGGAGTTCAATCCACTCCCTTGTGAGCAGG
ACGCGACCGTCTTTCCACCGATCTGGGTCCATCCGCCCCCATATGCAGCG
GCATTGCAAATACAAAGCTTAGCTAGAATTCTGGTATTATCACACCGTCC
GACTGTGAACGGGTTCCAAGATTACCGTGCTGCTCAAAAGCTGCTTACTA
CGTCAGTGAACACAATATGTGGCATTGCTCGAACTATAAGCGAGGACAAC
GTCGCTGCCAGCCTTATGTCACTGTATTGTATATATGGGGCTGGGATGAG
CGTTCATACCCCTCACGAGCGGGCAGCATTGCTCGAATTAATCGATATTT
TCGAGAGCAGAGTCTGTTGGCCTAGATATTCATTACGCAACGACCTCGAA
TCAGAATACCGTAAGGATGGCCTTTCTGGTTTCACGACCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000111.2 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | Fungal specific transcription factor domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:252824..254935 + |
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