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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:312907..313766- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_16665-T1 ID=CAN33_16665-T1|Name=CAN33_16665-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=860bp|location=Sequence derived from alignment at NKJJ01000011.1:312907..313766- (Aspergillus niger FDAARGOS_311)
ATGCCTACAGAGGTCATCATCAAGATATTCGGGGAACTCACTCTTCCGGA
TTCGCTTCACTTGGCCGCGACTTGCCGTCGACTCCGCCAGGTCATGAAAG
AAAATACGCCTGCCATTTACAGACGCCTACGCAGACAGATCCCATGTGAG
CGATATGCAAGAGTCGTACTGGCAGATCAAGGGGGCCCGCCACCTTATTC
GTCTTCTTCAATGACTATCGCGGATCTTTTACGGTTGCGACGGAACTCTC
GTATCGTGGAGAAGGCCATCGAGGTGTTTGACCGTGATATTACCGCGCAT
ATTCGAAGTGAGTAGACAGATTGAGAAGCACAGTAAGTATGAGAGACATG
TGATAATTGAAATCTTTTACAGTTTCCCTTAAGAGCATCGATGACCAATT
CTATGGAGGAAACCCACGTCCGCTGTCATTGACTCCAACAGAACGCCATC
GGTTCACTCGGAGCTACTACCAAGTTTGGAGTCTTCTACTCCTAAACCAA
CCATCCCGACAAAAAAGATATCAGAATATGTTGCTGAAGCACTTATACAT
GATCTACGAGATGACTGATCTTGATCAGCCAATTGGGGACGAATCGAGAT
CTTTCCCAGCTGACGAGAAGCGATGCGAACTGCTTCAAGAAGTAAGCGAG
TACCTCCGTGATCTCTACCACAACATCCATGGAGTTGACTACATCGATTT
CTCGGGGCAAAGTGTTTCCATGCGTACGCAAGGTCATGCAGCTATATGGG
ACCATTGCCAGCCCGATTTAAAGAAGATTGTTTGCTACCAGTGGCGAGAT
CCAGAGAAGAAACCTGTCCAGGAGGAAGAGGTGTGGGAGCATACAACTGA
TGAAGAATGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:312907..313766- >CAN33_16665-T1 ID=CAN33_16665-T1|Name=CAN33_16665-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1590bp|location=Sequence derived from alignment at NKJJ01000011.1:312907..313766- (Aspergillus niger FDAARGOS_311)
TTTCCCTTAAGAGCATCGATGACCAATTCTATGGAGGAAACCCACGTCCG
CTGTCATTGACTCCAACAGAACGCCATCGGTTCACTCGGAGCTACTACCA
AGTTTGGAGTCTTCTACTCCTAAACCAACCATCCCGACAAAAAAGATATC
AGAATATGTTGCTGAAGCACTTATACATGATCTACGAGATGACTGATCTT
GATCAGCCAATTGGGGACGAATCGAGATCTTTCCCAGCTGACGAGAAGCG
ATGCGAACTGCTTCAAGAAGTAAGCGAGTACCTCCGTGATCTCTACCACA
ACATCCATGGAGTTGACTACATCGATTTCTCGGGGCAAAGTGTTTCCATG
CGTACGCAAGGTCATGCAGCTATATGGGACCATTGCCAGCCCGATTTAAA
GAAGATTGTTTGCTACCAGTGGCGAGATCCAGAGAAGAAACCTGTCCAGG
AGGAAGAGGTGTGGGAGCATACAACTGATGAAGAATGAATGCCTACAGAG
GTCATCATCAAGATATTCGGGGAACTCACTCTTCCGGATTCGCTTCACTT
GGCCGCGACTTGCCGTCGACTCCGCCAGGTCATGAAAGAAAATACGCCTG
CCATTTACAGACGCCTACGCAGACAGATCCCATGTGAGCGATATGCAAGA
GTCGTACTGGCAGATCAAGGGGGCCCGCCACCTTATTCGTCTTCTTCAAT
GACTATCGCGGATCTTTTACGGTTGCGACGGAACTCTCGTATCGTGGAGA
AGGCCATCGAGGTGTTTGACCGTGATATTACCGCGCATATTCGAATTTCC
CTTAAGAGCATCGATGACCAATTCTATGGAGGAAACCCACGTCCGCTGTC
ATTGACTCCAACAGAACGCCATCGGTTCACTCGGAGCTACTACCAAGTTT
GGAGTCTTCTACTCCTAAACCAACCATCCCGACAAAAAAGATATCAGAAT
ATGTTGCTGAAGCACTTATACATGATCTACGAGATGACTGATCTTGATCA
GCCAATTGGGGACGAATCGAGATCTTTCCCAGCTGACGAGAAGCGATGCG
AACTGCTTCAAGAAGTAAGCGAGTACCTCCGTGATCTCTACCACAACATC
CATGGAGTTGACTACATCGATTTCTCGGGGCAAAGTGTTTCCATGCGTAC
GCAAGGTCATGCAGCTATATGGGACCATTGCCAGCCCGATTTAAAGAAGA
TTGTTTGCTACCAGTGGCGAGATCCAGAGAAGAAACCTGTCCAGGAGGAA
GAGGTGTGGGAGCATACAACTGATGAAGAATGAATGCCTACAGAGGTCAT
CATCAAGATATTCGGGGAACTCACTCTTCCGGATTCGCTTCACTTGGCCG
CGACTTGCCGTCGACTCCGCCAGGTCATGAAAGAAAATACGCCTGCCATT
TACAGACGCCTACGCAGACAGATCCCATGTGAGCGATATGCAAGAGTCGT
ACTGGCAGATCAAGGGGGCCCGCCACCTTATTCGTCTTCTTCAATGACTA
TCGCGGATCTTTTACGGTTGCGACGGAACTCTCGTATCGTGGAGAAGGCC
ATCGAGGTGTTTGACCGTGATATTACCGCGCATATTCGAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| Product | F-box-like family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:312907..313766 - |
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