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CAN33_37195-T1, CAN33_37195-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_37195-T1
Unique NameCAN33_37195-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:720820..721169-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_37195-T1 ID=CAN33_37195-T1|Name=CAN33_37195-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=350bp|location=Sequence derived from alignment at NKJJ01000017.1:720820..721169- (Aspergillus niger FDAARGOS_311)
ATGGACAAGGAGGTGCGCGTCAAGTTCAATGGCGGTCGTGAGGGTAAGAT
CCACCCCTACTGTTGCAATTTACATACACTCCTGCTGATATTTGTGTCCA
GTTATTGGTACGCTCAAGGGATACGACCAACTTATGAATCTGGTCCTGGA
CGATGTCAAGGAATCCATGCGCGGTAAGCACACCCTGCAATTTCCACACC
ACGACTTTACTGACGGCCCCAGATGATGAGGGCAACGAGAACACTCGCTC
TCTGGGTCTCGTCGTGGCCCGTGGCACCATCATCGTCCTGATCTCGCCCG
CCGACGGCAGCGAGGAGATTGCCAACCCCTTCGTGCAACCCGAAGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:720820..721169-

>CAN33_37195-T1 ID=CAN33_37195-T1|Name=CAN33_37195-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=729bp|location=Sequence derived from alignment at NKJJ01000017.1:720820..721169- (Aspergillus niger FDAARGOS_311)
ATGATGAGGGCAACGAGAACACTCGCTCTCTGGGTCTCGTCGTGGCCCGT
GGCACCATCATCGTCCTGATCTCGCCCGCCGACGGCAGCGAGGAGATTGC
CAACCCCTTCGTGCAACCCGAAGAGTAATTATTGGTACGCTCAAGGGATA
CGACCAACTTATGAATCTGGTCCTGGACGATGTCAAGGAATCCATGCGCG
ATGGACAAGGAGGTGCGCGTCAAGTTCAATGGCGGTCGTGAGGATGATGA
GGGCAACGAGAACACTCGCTCTCTGGGTCTCGTCGTGGCCCGTGGCACCA
TCATCGTCCTGATCTCGCCCGCCGACGGCAGCGAGGAGATTGCCAACCCC
TTCGTGCAACCCGAAGAGTAATTATTGGTACGCTCAAGGGATACGACCAA
CTTATGAATCTGGTCCTGGACGATGTCAAGGAATCCATGCGCGATGGACA
AGGAGGTGCGCGTCAAGTTCAATGGCGGTCGTGAGGATGATGAGGGCAAC
GAGAACACTCGCTCTCTGGGTCTCGTCGTGGCCCGTGGCACCATCATCGT
CCTGATCTCGCCCGCCGACGGCAGCGAGGAGATTGCCAACCCCTTCGTGC
AACCCGAAGAGTAATTATTGGTACGCTCAAGGGATACGACCAACTTATGA
ATCTGGTCCTGGACGATGTCAAGGAATCCATGCGCGATGGACAAGGAGGT
GCGCGTCAAGTTCAATGGCGGTCGTGAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
GO:0000956nuclear-transcribed mRNA catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_37195CAN33_37195Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37195-T1CAN33_37195-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37195-T1.cdsCAN33_37195-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37195-T1.exon3CAN33_37195-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_37195-T1.exon2CAN33_37195-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_37195-T1.exon1CAN33_37195-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR017132
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
ProductLSM domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:720820..721169 -
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