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CAN33_38385-T1, CAN33_38385-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38385-T1
Unique NameCAN33_38385-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1420403..1421372+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38385-T1 ID=CAN33_38385-T1|Name=CAN33_38385-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=970bp|location=Sequence derived from alignment at NKJJ01000017.1:1420403..1421372+ (Aspergillus niger FDAARGOS_311)
ATGGGGATGGCACTCAGCTCGAAGATTCAAACGATTGATGATGAGAATAC
TTCTCCTACAGAGAATAACTCAAGGTATGCATTAGATATCCCTAATCAGT
TAGGAACTGCCCTTATAAAGTGACATTGACTCATTCCCACCACCCACAAA
CAGACCAACAGACCATCCCACACCATCAAGACAACCTCATCAACACTCAA
CACCAACAAAATCACCACCCCACAACCGCCACCGTCTACACGAATTGTAC
GAACAATTCCCCCAAGCAAACCTCCTCCATCAATACGACCCCCTAACCCA
CACACCTCCAGCTTCATCGGCAAAACCGGCGGCCAAATCTTCCACGAAAT
GATGCGCCTCCACAACGTCAAACACATCTGTAAGCCTGTCTCTCCCCTTC
CCTCTTTCCAACTATACACCCTCCCAACTAACCACCACCACCACCATCTC
CCTCCCTTTAGTCGGCTACCCAGGCGGCACCATCCTCCCCATCCTGGACG
CGCTCTACGCCTCCCCGCATCTAACATTCATCCTCCCCAAACACGAGCAA
TCAGCCGGCCACATGGCCGAAGGCTACGCGCGCGCCTCGATCTCCTCATA
TCCCACCCCCGGCATCGTCCTCGTAACCTCCGGCCCCGGCGCAACGAATC
TCATCACGCCGCTGCAGAACGCCCTCAGCGACGGCACCCCGCTCATTGCT
TTCTGTGGACAGGTGGCGACGAGCGCCATCGGGAAGGACGGGTTCCAGGA
GGCGGATGTGTTGGGGATGACGAGATTTTGTACGAAGTGGAATGTGGGCG
TTAAGCATGTGAGGGAGTTGCCGCAGAGGATTGAGGAGGCGTTTTGGGTG
GCGTTGAGTGGGAGGATGGGGCCTGTGGTCGTGGAGGTGCCCAAGGATGT
GGGGCGGGGGTTTATTCTTGATATGTATTATGGCTTGTTTGTATTGGAGG
TTCGTTTGTTTGGGGGATAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1420403..1421372+

>CAN33_38385-T1 ID=CAN33_38385-T1|Name=CAN33_38385-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2403bp|location=Sequence derived from alignment at NKJJ01000017.1:1420403..1421372+ (Aspergillus niger FDAARGOS_311)
ATGGGGATGGCACTCAGCTCGAAGATTCAAACGATTGATGATGAGAATAC
TTCTCCTACAGAGAATAACTCAAGACCATCCCACACCATCAAGACAACCT
CATCAACACTCAACACCAACAAAATCACCACCCCACAACCGCCACCGTCT
ACACGAATTGTACGAACAATTCCCCCAAGCAAACCTCCTCCATCAATACG
ACCCCCTAACCCACACACCTCCAGCTTCATCGGCAAAACCGGCGGCCAAA
TCTTCCACGAAATGATGCGCCTCCACAACGTCAAACACATCTTCGGCTAC
CCAGGCGGCACCATCCTCCCCATCCTGGACGCGCTCTACGCCTCCCCGCA
TCTAACATTCATCCTCCCCAAACACGAGCAATCAGCCGGCCACATGGCCG
AAGGCTACGCGCGCGCCTCGATCTCCTCATATCCCACCCCCGGCATCGTC
CTCGTAACCTCCGGCCCCGGCGCAACGAATCTCATCACGCCGCTGCAGAA
CGCCCTCAGCGACGGCACCCCGCTCATTGCTTTCTGTGGACAGGTGGCGA
CGAGCGCCATCGGGAAGGACGGGTTCCAGGAGGCGGATGTGTTGGGGATG
ACGAGATTTTGTACGAAGTGGAATGTGGGCGTTAAGCATGTGAGGGAGTT
GCCGCAGAGGATTGAGGAGGCGTTTTGGGTGGCGTTGAGTGGGAGGATGG
GGCCTGTGGTCGTGGAGGTGCCCAAGGATGTGGGGCGGGGGTTTATTCTT
GATATGTATTATGGCTTGTTTGTATTGGAGGTTCGTTTGTTTGGGGGATA
GATGGGGATGGCACTCAGCTCGAAGATTCAAACGATTGATGATGAGAATA
CTTCTCCTACAGAGAATAACTCAAGACCATCCCACACCATCAAGACAACC
TCATCAACACTCAACACCAACAAAATCACCACCCCACAACCGCCACCGTC
TACACGAATTGTACGAACAATTCCCCCAAGCAAACCTCCTCCATCAATAC
GACCCCCTAACCCACACACCTCCAGCTTCATCGGCAAAACCGGCGGCCAA
ATCTTCCACGAAATGATGCGCCTCCACAACGTCAAACACATCTTCGGCTA
CCCAGGCGGCACCATCCTCCCCATCCTGGACGCGCTCTACGCCTCCCCGC
ATCTAACATTCATCCTCCCCAAACACGAGCAATCAGCCGGCCACATGGCC
GAAGGCTACGCGCGCGCCTCGATCTCCTCATATCCCACCCCCGGCATCGT
CCTCGTAACCTCCGGCCCCGGCGCAACGAATCTCATCACGCCGCTGCAGA
ACGCCCTCAGCGACGGCACCCCGCTCATTGCTTTCTGTGGACAGGTGGCG
ACGAGCGCCATCGGGAAGGACGGGTTCCAGGAGGCGGATGTGTTGGGGAT
GACGAGATTTTGTACGAAGTGGAATGTGGGCGTTAAGCATGTGAGGGAGT
TGCCGCAGAGGATTGAGGAGGCGTTTTGGGTGGCGTTGAGTGGGAGGATG
GGGCCTGTGGTCGTGGAGGTGCCCAAGGATGTGGGGCGGGGGTTTATTCT
TGATATGTATTATGGCTTGTTTGTATTGGAGGTTCGTTTGTTTGGGGGAT
AGATGGGGATGGCACTCAGCTCGAAGATTCAAACGATTGATGATGAGAAT
ACTTCTCCTACAGAGAATAACTCAAGACCATCCCACACCATCAAGACAAC
CTCATCAACACTCAACACCAACAAAATCACCACCCCACAACCGCCACCGT
CTACACGAATTGTACGAACAATTCCCCCAAGCAAACCTCCTCCATCAATA
CGACCCCCTAACCCACACACCTCCAGCTTCATCGGCAAAACCGGCGGCCA
AATCTTCCACGAAATGATGCGCCTCCACAACGTCAAACACATCTTCGGCT
ACCCAGGCGGCACCATCCTCCCCATCCTGGACGCGCTCTACGCCTCCCCG
CATCTAACATTCATCCTCCCCAAACACGAGCAATCAGCCGGCCACATGGC
CGAAGGCTACGCGCGCGCCTCGATCTCCTCATATCCCACCCCCGGCATCG
TCCTCGTAACCTCCGGCCCCGGCGCAACGAATCTCATCACGCCGCTGCAG
AACGCCCTCAGCGACGGCACCCCGCTCATTGCTTTCTGTGGACAGGTGGC
GACGAGCGCCATCGGGAAGGACGGGTTCCAGGAGGCGGATGTGTTGGGGA
TGACGAGATTTTGTACGAAGTGGAATGTGGGCGTTAAGCATGTGAGGGAG
TTGCCGCAGAGGATTGAGGAGGCGTTTTGGGTGGCGTTGAGTGGGAGGAT
GGGGCCTGTGGTCGTGGAGGTGCCCAAGGATGTGGGGCGGGGGTTTATTC
TTGATATGTATTATGGCTTGTTTGTATTGGAGGTTCGTTTGTTTGGGGGA
TAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030976thiamine pyrophosphate binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ILV1_2CAN33_38385Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38385-T1.exon1CAN33_38385-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_38385-T1.exon2CAN33_38385-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_38385-T1.exon3CAN33_38385-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38385-T1.cdsCAN33_38385-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38385-T1CAN33_38385-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR012001
DBxrefPFAM:PF02776
Productthreonine deaminase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1420403..1421372 +
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