CAN33_38570-T1, CAN33_38570-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview


Name	CAN33_38570-T1
Unique Name	CAN33_38570-T1
Type	mRNA
Organism	Aspergillus niger FDAARGOS_311

Sequences

The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1532476..1534847+
coding sequence from alignment at NKJJ01000017.1:1532476..1534847+

mRNA from alignment at NKJJ01000017.1:1532476..1534847+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CAN33_38570-T1 ID=CAN33_38570-T1|Name=CAN33_38570-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2372bp|location=Sequence derived from alignment at NKJJ01000017.1:1532476..1534847+ (Aspergillus niger FDAARGOS_311)
ATGGCGACCCCATCGTCCAAGCCAAACCCAGGAGCGACTCCGACGCATCT
GACCTCGTCGCCTCGTCCGTCTGGTGCTCATATGGCCCGCCCGATTTCTC
ACAAATCGCCGTCAACGAGGACGCCTTCAGCTTCCGGTCATGGACACAAC
CAACCCCCCACTTCGATGCACCAATATTCTACCCCTCTCGCTGTGACTAC
CGGAGCGGAGGACCCCGTTACGTTCAGTTCCCCGTCCGCTCTCCTCGCGC
TTGGTGGCTACAGCGGAATCAGTCCGTCCCCCGCCGGGCACGATGGGCTT
GTCGGCGCAGGCATGAACGAGAATGATATCCAGGCATTGGGCATGCCGGG
TCTGAAGCTCGGGGGTGCTCGCGACAGCGAGGAGGAGCGCAGAAGACATA
TCGACGATGTGGTCCAGCTTCTACGAGCCCGAGTCTCGGGGCGGGGCGTT
TGCAGAGAGGGTATTGAGCGGCTGAGTGATCTCGAAGGGTTCGAGTCGAT
CTGGCAGGAGGACAGTCTCAGCATTGCGGGGAACTTTGTCGACCTGGAGA
TCGACTTCCATCGGGGGTATAATGTGGTGAAGGACGTTAGCTTGAAGTAT
GCGACGCCCGATGCGCAGGATGGGGAACAGCGCGACGAGGCTACGGCGGT
GCTTAAGCGCGACCTGATCCAGTCGCCGGAGGAAGGAGACCGGGGTGCTT
GGAAGTCGTTGCGGGGGTTCCATGAGAATCTACAGTGGCTTGCCAAACAT
GATCGGCTTAGTCAGGAGGTCAATTGTTTCGAGGCCATCGAAGGTCTTTA
CGAGAGCTTGAAGCGCGTGTGGGAGGCGGAGTGGAACCATCGCAAGTTCG
CGGGGGTGTACGACCATCTTTGCAGTGGCTGGGTTGGCCAGCCGTGTATG
CACAAGGGGAGTCGCATTGGTCTCAGCTTGGATTACTGGGTGCAGCAAGC
ACGGGTTCTGGATGCGAAGGAGAAGCAGAAGACGTCGTCTGATGCGATGG
TGGTTGATGCACCGAATGGACAACCGTCGGATGATGATTCGAGCAGCTTG
GAAGGGAAATGGAGCATTGTGGTGGAGTGCGAAGAGGGTTACCCATCCCT
CCGTGTGTCGAAGGACTGGGTTGGATCCGAAGTGTTAACTGGGGTCAATA
ACAATGACAATGGGCCGTCGTCGAGTGAGGCGCATGGGTCTGAAGCTGCA
GTTGTCAACTGGGTTGATCCTCCGGCGACGTTGACCAACAACCAAGGTCA
CCCGGACGCCATGGCACTTGACTCGAATATGCTGGGTTCTTCTGCTCCTA
ATCGTCGCTTCGTTGCTAAGTTGGAGCCGGCCTTGGATCTACCTATTTTG
GCAGCATCTGATATCTACCGGCACCTTGGAATGCAACTGCCGCAGGAGTT
CAAAATGGTTACCTACGATGGACTCCTGGCCCCAGGCTGGTCGCCTTTGT
CGGCAGCAGGGGCTATGGGACTGGGGCCAGAGGAGGCCTCTCAGCTTGAG
CGGAGGAGACGCAGAATGTCGGTGCAATCGGTTGACAGTACGGGCAAACC
GTGTACGAAGCATCACAGCTACACGTTCCAGCCGTTTGAGTCTGTAGCTG
GCCGAACAATGAGAGATATCCCATTCGCACATCCCCGGCAACTCGCAGAT
ATCCTTCCGGTATGATTCGGAGACTCATGTTGTGTGTCGAGGTTACTGAC
ATATTCTTCTAGATCCTTCGCCAGTATGCCTTTCTGGCCAACCTGATCCG
CAGCATTTTCAGCTCTTCATACAAGCCCGATGAGGACAAATCCGCCACGC
CGGCTGATTCTTCAAATATCTCATTTAGCCCACCCAAATTTACTGATGGG
AAGACGAAGAAAGATGTCATCATTCTGAGCAATGCCGACCCGAATGAGAA
GAGACTCGATGCATTGTTGGGAGGCTTCGAGAAATTAGCAACTTCGCCGG
GTGCTAAGGGTAAAGGCCCTGTGGGGGTAGGAAACGAGAATTCGGGCCCC
AATTCTACTGTTGACAACGATGTCAAGGTAGACGTAACGTTGCGGACGCA
ACTGGGACAAGCACCAGTGATCATGCTACTTTTCGCAGTGGATCAACCAG
ACGAAGCGTCGGAATCCGCCAACGCGGAGGCGGCACTGACGAAGGTGTCC
ATTAGTCTGGAAGTTGGACTAAACGGTCGGGTCTCCGTTGTGGACATGAC
CGGTCTGCTAGATGACAACAACACTACCACCACGGACAGCATGGAAGACA
CCCCAGAGAAGAAGGCTCTCGAGTTGCAAAGCAAAATAGCAAATGTGCTG
GAATTGTCACAGGATATTGGGATCTTGGTGGAATGGATTTTACGATGGGC
GCGGCAGCGGAAGGGCCGCTGA

Coding sequence (CDS) from alignment at NKJJ01000017.1:1532476..1534847+

>CAN33_38570-T1 ID=CAN33_38570-T1|Name=CAN33_38570-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4638bp|location=Sequence derived from alignment at NKJJ01000017.1:1532476..1534847+ (Aspergillus niger FDAARGOS_311)
ATGGCGACCCCATCGTCCAAGCCAAACCCAGGAGCGACTCCGACGCATCT
GACCTCGTCGCCTCGTCCGTCTGGTGCTCATATGGCCCGCCCGATTTCTC
ACAAATCGCCGTCAACGAGGACGCCTTCAGCTTCCGGTCATGGACACAAC
CAACCCCCCACTTCGATGCACCAATATTCTACCCCTCTCGCTGTGACTAC
CGGAGCGGAGGACCCCGTTACGTTCAGTTCCCCGTCCGCTCTCCTCGCGC
TTGGTGGCTACAGCGGAATCAGTCCGTCCCCCGCCGGGCACGATGGGCTT
GTCGGCGCAGGCATGAACGAGAATGATATCCAGGCATTGGGCATGCCGGG
TCTGAAGCTCGGGGGTGCTCGCGACAGCGAGGAGGAGCGCAGAAGACATA
TCGACGATGTGGTCCAGCTTCTACGAGCCCGAGTCTCGGGGCGGGGCGTT
TGCAGAGAGGGTATTGAGCGGCTGAGTGATCTCGAAGGGTTCGAGTCGAT
CTGGCAGGAGGACAGTCTCAGCATTGCGGGGAACTTTGTCGACCTGGAGA
TCGACTTCCATCGGGGGTATAATGTGGTGAAGGACGTTAGCTTGAAGTAT
GCGACGCCCGATGCGCAGGATGGGGAACAGCGCGACGAGGCTACGGCGGT
GCTTAAGCGCGACCTGATCCAGTCGCCGGAGGAAGGAGACCGGGGTGCTT
GGAAGTCGTTGCGGGGGTTCCATGAGAATCTACAGTGGCTTGCCAAACAT
GATCGGCTTAGTCAGGAGGTCAATTGTTTCGAGGCCATCGAAGGTCTTTA
CGAGAGCTTGAAGCGCGTGTGGGAGGCGGAGTGGAACCATCGCAAGTTCG
CGGGGGTGTACGACCATCTTTGCAGTGGCTGGGTTGGCCAGCCGTGTATG
CACAAGGGGAGTCGCATTGGTCTCAGCTTGGATTACTGGGTGCAGCAAGC
ACGGGTTCTGGATGCGAAGGAGAAGCAGAAGACGTCGTCTGATGCGATGG
TGGTTGATGCACCGAATGGACAACCGTCGGATGATGATTCGAGCAGCTTG
GAAGGGAAATGGAGCATTGTGGTGGAGTGCGAAGAGGGTTACCCATCCCT
CCGTGTGTCGAAGGACTGGGTTGGATCCGAAGTGTTAACTGGGGTCAATA
ACAATGACAATGGGCCGTCGTCGAGTGAGGCGCATGGGTCTGAAGCTGCA
GTTGTCAACTGGGTTGATCCTCCGGCGACGTTGACCAACAACCAAGGTCA
CCCGGACGCCATGGCACTTGACTCGAATATGCTGGGTTCTTCTGCTCCTA
ATCGTCGCTTCGTTGCTAAGTTGGAGCCGGCCTTGGATCTACCTATTTTG
GCAGCATCTGATATCTACCGGCACCTTGGAATGCAACTGCCGCAGGAGTT
CAAAATGGTTACCTACGATGGACTCCTGGCCCCAGGCTGGTCGCCTTTGT
CGGCAGCAGGGGCTATGGGACTGGGGCCAGAGGAGGCCTCTCAGCTTGAG
CGGAGGAGACGCAGAATGTCGGTGCAATCGGTTGACAGTACGGGCAAACC
GTGTACGAAGCATCACAGCTACACGTTCCAGCCGTTTGAGTCTGTAGCTG
GCCGAACAATGAGAGATATCCCATTCGCACATCCCCGGCAACTCGCAGAT
ATCCTTCCGATCCTTCGCCAGTATGCCTTTCTGGCCAACCTGATCCGCAG
CATTTTCAGCTCTTCATACAAGCCCGATGAGGACAAATCCGCCACGCCGG
CTGATTCTTCAAATATCTCATTTAGCCCACCCAAATTTACTGATGGGAAG
ACGAAGAAAGATGTCATCATTCTGAGCAATGCCGACCCGAATGAGAAGAG
ACTCGATGCATTGTTGGGAGGCTTCGAGAAATTAGCAACTTCGCCGGGTG
CTAAGGGTAAAGGCCCTGTGGGGGTAGGAAACGAGAATTCGGGCCCCAAT
TCTACTGTTGACAACGATGTCAAGGTAGACGTAACGTTGCGGACGCAACT
GGGACAAGCACCAGTGATCATGCTACTTTTCGCAGTGGATCAACCAGACG
AAGCGTCGGAATCCGCCAACGCGGAGGCGGCACTGACGAAGGTGTCCATT
AGTCTGGAAGTTGGACTAAACGGTCGGGTCTCCGTTGTGGACATGACCGG
TCTGCTAGATGACAACAACACTACCACCACGGACAGCATGGAAGACACCC
CAGAGAAGAAGGCTCTCGAGTTGCAAAGCAAAATAGCAAATGTGCTGGAA
TTGTCACAGGATATTGGGATCTTGGTGGAATGGATTTTACGATGGGCGCG
GCAGCGGAAGGGCCGCTGAATGGCGACCCCATCGTCCAAGCCAAACCCAG
GAGCGACTCCGACGCATCTGACCTCGTCGCCTCGTCCGTCTGGTGCTCAT
ATGGCCCGCCCGATTTCTCACAAATCGCCGTCAACGAGGACGCCTTCAGC
TTCCGGTCATGGACACAACCAACCCCCCACTTCGATGCACCAATATTCTA
CCCCTCTCGCTGTGACTACCGGAGCGGAGGACCCCGTTACGTTCAGTTCC
CCGTCCGCTCTCCTCGCGCTTGGTGGCTACAGCGGAATCAGTCCGTCCCC
CGCCGGGCACGATGGGCTTGTCGGCGCAGGCATGAACGAGAATGATATCC
AGGCATTGGGCATGCCGGGTCTGAAGCTCGGGGGTGCTCGCGACAGCGAG
GAGGAGCGCAGAAGACATATCGACGATGTGGTCCAGCTTCTACGAGCCCG
AGTCTCGGGGCGGGGCGTTTGCAGAGAGGGTATTGAGCGGCTGAGTGATC
TCGAAGGGTTCGAGTCGATCTGGCAGGAGGACAGTCTCAGCATTGCGGGG
AACTTTGTCGACCTGGAGATCGACTTCCATCGGGGGTATAATGTGGTGAA
GGACGTTAGCTTGAAGTATGCGACGCCCGATGCGCAGGATGGGGAACAGC
GCGACGAGGCTACGGCGGTGCTTAAGCGCGACCTGATCCAGTCGCCGGAG
GAAGGAGACCGGGGTGCTTGGAAGTCGTTGCGGGGGTTCCATGAGAATCT
ACAGTGGCTTGCCAAACATGATCGGCTTAGTCAGGAGGTCAATTGTTTCG
AGGCCATCGAAGGTCTTTACGAGAGCTTGAAGCGCGTGTGGGAGGCGGAG
TGGAACCATCGCAAGTTCGCGGGGGTGTACGACCATCTTTGCAGTGGCTG
GGTTGGCCAGCCGTGTATGCACAAGGGGAGTCGCATTGGTCTCAGCTTGG
ATTACTGGGTGCAGCAAGCACGGGTTCTGGATGCGAAGGAGAAGCAGAAG
ACGTCGTCTGATGCGATGGTGGTTGATGCACCGAATGGACAACCGTCGGA
TGATGATTCGAGCAGCTTGGAAGGGAAATGGAGCATTGTGGTGGAGTGCG
AAGAGGGTTACCCATCCCTCCGTGTGTCGAAGGACTGGGTTGGATCCGAA
GTGTTAACTGGGGTCAATAACAATGACAATGGGCCGTCGTCGAGTGAGGC
GCATGGGTCTGAAGCTGCAGTTGTCAACTGGGTTGATCCTCCGGCGACGT
TGACCAACAACCAAGGTCACCCGGACGCCATGGCACTTGACTCGAATATG
CTGGGTTCTTCTGCTCCTAATCGTCGCTTCGTTGCTAAGTTGGAGCCGGC
CTTGGATCTACCTATTTTGGCAGCATCTGATATCTACCGGCACCTTGGAA
TGCAACTGCCGCAGGAGTTCAAAATGGTTACCTACGATGGACTCCTGGCC
CCAGGCTGGTCGCCTTTGTCGGCAGCAGGGGCTATGGGACTGGGGCCAGA
GGAGGCCTCTCAGCTTGAGCGGAGGAGACGCAGAATGTCGGTGCAATCGG
TTGACAGTACGGGCAAACCGTGTACGAAGCATCACAGCTACACGTTCCAG
CCGTTTGAGTCTGTAGCTGGCCGAACAATGAGAGATATCCCATTCGCACA
TCCCCGGCAACTCGCAGATATCCTTCCGATCCTTCGCCAGTATGCCTTTC
TGGCCAACCTGATCCGCAGCATTTTCAGCTCTTCATACAAGCCCGATGAG
GACAAATCCGCCACGCCGGCTGATTCTTCAAATATCTCATTTAGCCCACC
CAAATTTACTGATGGGAAGACGAAGAAAGATGTCATCATTCTGAGCAATG
CCGACCCGAATGAGAAGAGACTCGATGCATTGTTGGGAGGCTTCGAGAAA
TTAGCAACTTCGCCGGGTGCTAAGGGTAAAGGCCCTGTGGGGGTAGGAAA
CGAGAATTCGGGCCCCAATTCTACTGTTGACAACGATGTCAAGGTAGACG
TAACGTTGCGGACGCAACTGGGACAAGCACCAGTGATCATGCTACTTTTC
GCAGTGGATCAACCAGACGAAGCGTCGGAATCCGCCAACGCGGAGGCGGC
ACTGACGAAGGTGTCCATTAGTCTGGAAGTTGGACTAAACGGTCGGGTCT
CCGTTGTGGACATGACCGGTCTGCTAGATGACAACAACACTACCACCACG
GACAGCATGGAAGACACCCCAGAGAAGAAGGCTCTCGAGTTGCAAAGCAA
AATAGCAAATGTGCTGGAATTGTCACAGGATATTGGGATCTTGGTGGAAT
GGATTTTACGATGGGCGCGGCAGCGGAAGGGCCGCTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016592	mediator complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006357	regulation of transcription by RNA polymerase II

Vocabulary: **Molecular Function**
Term	Definition
GO:0003712	transcription coregulator activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CAN33_38570	CAN33_38570	Aspergillus niger FDAARGOS_311	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_38570-T1.exon1	CAN33_38570-T1.exon1	Aspergillus niger FDAARGOS_311	exon
CAN33_38570-T1.exon2	CAN33_38570-T1.exon2	Aspergillus niger FDAARGOS_311	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_38570-T1.cds	CAN33_38570-T1.cds	Aspergillus niger FDAARGOS_311	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_38570-T1	CAN33_38570-T1-protein	Aspergillus niger FDAARGOS_311	polypeptide

Properties


Property Name	Value
Note	EggNog:ENOG41
DBxref	InterPro:IPR019680
DBxref	PFAM:PF10744
Product	Mediator of RNA polymerase II transcription subunit 1 family protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger FDAARGOS_311 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NKJJ01000017.1	supercontig	NKJJ01000017.1:1532476..1534847 +

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CAN33_38570-T1, CAN33_38570-T1 (mRNA) Aspergillus niger FDAARGOS_311