|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:498231..499422+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_4530-T1 ID=CAN33_4530-T1|Name=CAN33_4530-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1192bp|location=Sequence derived from alignment at NKJJ01000019.1:498231..499422+ (Aspergillus niger FDAARGOS_311)
ATGCCGTCCGCCACCGCGTCCGGGGTAGACAATGGAGGCTCTGCCAAATC
CCGCGAGCACAACCAGGGGAATCAGGATCGGAAATACACACCAGAGCAGA
AGGCGGCTGTGCTGAGGATACGGAAATGTTCGGCAACGGCGTACTACGAG
ATCCTGTCATTGGAGAAGAGCGCCTCCGACGGCGAGATCAAGAAGGCGTA
TCGCAAACTGAGTCTGATGACACACCCTGATAAGAACGGGTATGAGGGAG
CGGATGAGGCGTTTAAGTGTGAGTAGTGATTGGGATATTACTCTGATGAT
TGTGTGCGAATTATATTTCTAATGGTCATTCTGGAAAATCAGTGGTTTCG
CGCGCCTTTCAGGTCTTATCAGACCCCGAGAAGAAAGCCAAGTATGATAG
GTTTGGAGGCGATCCGGACAGCAGGTTCACCCCGAGTGCTGGTCCCTCGG
GCGCTTCGCCTTTTGGCGGCTTTGGCGGCGGTGGATTCCCCCGGTCTGCG
GGTGCTGGGGGTCCGATGTTCGAGGAGGAGATCTCGCCGGAAGAACTGTT
CCAGCGGTTCTTTAGCGGTGGGTTTGGCAATATGGGTGGTGGTTTCAGTC
CTTTTGGTATGGCTTCTTCTTGTCGGTGCGAGGGACTTGGCTAATCAGTG
TGTCTAGGTGGACCCCAGTTTGTTTTCAACATGGGCGGCGGTCCTGGTAT
CCGGGTTCATCAGTTTGGAGGTGCTCGCCCCCGGAGAAGGCCCGTGAGGC
CAATGCTCGTACCGAACCTACACCCTCTTTGTGGGCTACCTTCCAGCAAC
TTCTCCCTCTTATTCTCCTCTTCGTGCTTCCGTGGATCTCGTCGCGATTC
TCCGGTTCTTCGACTCCGGCAGGCCCTTCGTACCGTTTTGACGCTGCCGT
GCCTCCCCACACAATGCATCGCACGACACCCAAGTTGAACGTGGACTATT
ATGTAAATCCCGGGGATGTGGAAGACTACAGCTCGCGGAAATTCCGGCAA
TTGGACCAGCGCGTGGAGGTGGACTACGTTACGAAACTACGGTACGAATG
CGAAGCCGAACAACATAGGCGCGATCGCATGCTCCAGGACGCCCAGGGCT
GGTTCTTCCCGGACGTAGACAAGATCAAGGAAGCGAGAGCAATGGAGCTT
AAGAGTTGTCGGCGACTAGACTCCCTCAAGGGGAGGTACTGA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:498231..499422+ >CAN33_4530-T1 ID=CAN33_4530-T1|Name=CAN33_4530-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3168bp|location=Sequence derived from alignment at NKJJ01000019.1:498231..499422+ (Aspergillus niger FDAARGOS_311)
ATGCCGTCCGCCACCGCGTCCGGGGTAGACAATGGAGGCTCTGCCAAATC
CCGCGAGCACAACCAGGGGAATCAGGATCGGAAATACACACCAGAGCAGA
AGGCGGCTGTGCTGAGGATACGGAAATGTTCGGCAACGGCGTACTACGAG
ATCCTGTCATTGGAGAAGAGCGCCTCCGACGGCGAGATCAAGAAGGCGTA
TCGCAAACTGAGTCTGATGACACACCCTGATAAGAACGGGTATGAGGGAG
CGGATGAGGCGTTTAAGTTGGTTTCGCGCGCCTTTCAGGTCTTATCAGAC
CCCGAGAAGAAAGCCAAGTATGATAGGTTTGGAGGCGATCCGGACAGCAG
GTTCACCCCGAGTGCTGGTCCCTCGGGCGCTTCGCCTTTTGGCGGCTTTG
GCGGCGGTGGATTCCCCCGGTCTGCGGGTGCTGGGGGTCCGATGTTCGAG
GAGGAGATCTCGCCGGAAGAACTGTTCCAGCGGTTCTTTAGCGGTGGGTT
TGGCAATATGGGTGGTGGTTTCAGTCCTTTTGTTTGTTTTCAACATGGGC
GGCGGTCCTGGTATCCGGGTTCATCAGTTTGGAGGTGCTCGCCCCCGGAG
AAGGCCCGTGAGGCCAATGCTCGTACCGAACCTACACCCTCTTTGTGGGC
TACCTTCCAGCAACTTCTCCCTCTTATTCTCCTCTTCGTGCTTCCGTGGA
TCTCGTCGCGATTCTCCGGTTCTTCGACTCCGGCAGGCCCTTCGTACCGT
TTTGACGCTGCCGTGCCTCCCCACACAATGCATCGCACGACACCCAAGTT
GAACGTGGACTATTATGTAAATCCCGGGGATGTGGAAGACTACAGCTCGC
GGAAATTCCGGCAATTGGACCAGCGCGTGGAGGTGGACTACGTTACGAAA
CTACGGTACGAATGCGAAGCCGAACAACATAGGCGCGATCGCATGCTCCA
GGACGCCCAGGGCTGGTTCTTCCCGGACGTAGACAAGATCAAGGAAGCGA
GAGCAATGGAGCTTAAGAGTTGTCGGCGACTAGACTCCCTCAAGGGGAGG
TACTGAATGCCGTCCGCCACCGCGTCCGGGGTAGACAATGGAGGCTCTGC
CAAATCCCGCGAGCACAACCAGGGGAATCAGGATCGGAAATACACACCAG
AGCAGAAGGCGGCTGTGCTGAGGATACGGAAATGTTCGGCAACGGCGTAC
TACGAGATCCTGTCATTGGAGAAGAGCGCCTCCGACGGCGAGATCAAGAA
GGCGTATCGCAAACTGAGTCTGATGACACACCCTGATAAGAACGGGTATG
AGGGAGCGGATGAGGCGTTTAAGTTGGTTTCGCGCGCCTTTCAGGTCTTA
TCAGACCCCGAGAAGAAAGCCAAGTATGATAGGTTTGGAGGCGATCCGGA
CAGCAGGTTCACCCCGAGTGCTGGTCCCTCGGGCGCTTCGCCTTTTGGCG
GCTTTGGCGGCGGTGGATTCCCCCGGTCTGCGGGTGCTGGGGGTCCGATG
TTCGAGGAGGAGATCTCGCCGGAAGAACTGTTCCAGCGGTTCTTTAGCGG
TGGGTTTGGCAATATGGGTGGTGGTTTCAGTCCTTTTGTTTGTTTTCAAC
ATGGGCGGCGGTCCTGGTATCCGGGTTCATCAGTTTGGAGGTGCTCGCCC
CCGGAGAAGGCCCGTGAGGCCAATGCTCGTACCGAACCTACACCCTCTTT
GTGGGCTACCTTCCAGCAACTTCTCCCTCTTATTCTCCTCTTCGTGCTTC
CGTGGATCTCGTCGCGATTCTCCGGTTCTTCGACTCCGGCAGGCCCTTCG
TACCGTTTTGACGCTGCCGTGCCTCCCCACACAATGCATCGCACGACACC
CAAGTTGAACGTGGACTATTATGTAAATCCCGGGGATGTGGAAGACTACA
GCTCGCGGAAATTCCGGCAATTGGACCAGCGCGTGGAGGTGGACTACGTT
ACGAAACTACGGTACGAATGCGAAGCCGAACAACATAGGCGCGATCGCAT
GCTCCAGGACGCCCAGGGCTGGTTCTTCCCGGACGTAGACAAGATCAAGG
AAGCGAGAGCAATGGAGCTTAAGAGTTGTCGGCGACTAGACTCCCTCAAG
GGGAGGTACTGAATGCCGTCCGCCACCGCGTCCGGGGTAGACAATGGAGG
CTCTGCCAAATCCCGCGAGCACAACCAGGGGAATCAGGATCGGAAATACA
CACCAGAGCAGAAGGCGGCTGTGCTGAGGATACGGAAATGTTCGGCAACG
GCGTACTACGAGATCCTGTCATTGGAGAAGAGCGCCTCCGACGGCGAGAT
CAAGAAGGCGTATCGCAAACTGAGTCTGATGACACACCCTGATAAGAACG
GGTATGAGGGAGCGGATGAGGCGTTTAAGTTGGTTTCGCGCGCCTTTCAG
GTCTTATCAGACCCCGAGAAGAAAGCCAAGTATGATAGGTTTGGAGGCGA
TCCGGACAGCAGGTTCACCCCGAGTGCTGGTCCCTCGGGCGCTTCGCCTT
TTGGCGGCTTTGGCGGCGGTGGATTCCCCCGGTCTGCGGGTGCTGGGGGT
CCGATGTTCGAGGAGGAGATCTCGCCGGAAGAACTGTTCCAGCGGTTCTT
TAGCGGTGGGTTTGGCAATATGGGTGGTGGTTTCAGTCCTTTTGTTTGTT
TTCAACATGGGCGGCGGTCCTGGTATCCGGGTTCATCAGTTTGGAGGTGC
TCGCCCCCGGAGAAGGCCCGTGAGGCCAATGCTCGTACCGAACCTACACC
CTCTTTGTGGGCTACCTTCCAGCAACTTCTCCCTCTTATTCTCCTCTTCG
TGCTTCCGTGGATCTCGTCGCGATTCTCCGGTTCTTCGACTCCGGCAGGC
CCTTCGTACCGTTTTGACGCTGCCGTGCCTCCCCACACAATGCATCGCAC
GACACCCAAGTTGAACGTGGACTATTATGTAAATCCCGGGGATGTGGAAG
ACTACAGCTCGCGGAAATTCCGGCAATTGGACCAGCGCGTGGAGGTGGAC
TACGTTACGAAACTACGGTACGAATGCGAAGCCGAACAACATAGGCGCGA
TCGCATGCTCCAGGACGCCCAGGGCTGGTTCTTCCCGGACGTAGACAAGA
TCAAGGAAGCGAGAGCAATGGAGCTTAAGAGTTGTCGGCGACTAGACTCC
CTCAAGGGGAGGTACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018253 |
| DBxref | InterPro:IPR015399 |
| DBxref | InterPro:IPR036869 |
| DBxref | InterPro:IPR001623 |
| DBxref | PFAM:PF09320 |
| DBxref | PFAM:PF00226 |
| Product | protein of unknown function (DUF1977) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:498231..499422 + |
|
