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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:622865..623883+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_4735-T1 ID=CAN33_4735-T1|Name=CAN33_4735-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1019bp|location=Sequence derived from alignment at NKJJ01000019.1:622865..623883+ (Aspergillus niger FDAARGOS_311)
ATGGCGGCTAATAAGCAGGGCAAGATGGTGAGTTAATCGGATCCTTCCCT
TTCGTGTTCATATCAGCTTGTATACACATGTTCGCGTGACTAACTCTTTA
TTCTTCATTTTTGAGTAGCAAAACCTCGTAAGTTACTGACGATACAAGTT
TCACTCGCGCGTCAAACCTGACAGTATCCTCAGATCAACTACCGGATGAG
AGTCACCCTCAATGATGGCCGACAGATGACGGGACAGATGCTCGCTTTCG
ATAAGGTATATATATCTGGGTCTTTCAGTGGCCATCGGATAACACTTGTG
GTCGGCTGGTCGCTGATGCAGAATTATAGCACATGAACCTTGTCCTCGCC
GATACAGAAGAATTCCGTCGCGTCAAGCGCAAGTCCAAGCCCGCCGCCGG
TTCGACCAACGCACCTCTTGTTGAGGCCGAAGAAAAGCGCACCCTGGGCC
TTACCATTGTTCGCGGTACACATGTCGTCTCTTGCTCAGTTGATGGACCT
CCTCCTGCCGATCCCTCTGCCCGACTCGGTGCTGCTGGTCCTAGCGCAGC
TGCCGCTGCTGCCACTCTCGCTGCTGGCCCTGGAATTAGCAAACCCGCTG
GACGTGGTCTGCCGGTCGGTCTGGGAGGCCCTGCTGCAGGTGTTGGTGGC
CCTCCCCCGCCGCCCGGCGGTTTTCCCGGCTTCCCTCCTGGTGGTAGTTT
CCCTGGAGTGCCGCCTCCGGGCTTCGCTGGTCGTGGTGGTGCCCCTGGTG
GACCTCGTAAGTTTGCACTTTCGAGCTCGATGTTGAACTTGGTTACTGAC
TTAGGATATTAGCTGGCTTTGCTCCTCCCCGGGATTCGCTCCCCAGGGTG
CTCCTCGTAAGTATCCTTGAATAGCGTGTTATGGTTATAGAGCTAACTGA
TGCTGTTGTAGCGGGTGCCTTCCAACCCCCACCGGGATTCCAGCCCCCTG
GACAAGGACGCGGATTCCCTCCACCCGGCTTTGGTGGACGGTGATTTGAT
AGTATGTGCAGCAGCATGA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:622865..623883+ >CAN33_4735-T1 ID=CAN33_4735-T1|Name=CAN33_4735-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3591bp|location=Sequence derived from alignment at NKJJ01000019.1:622865..623883+ (Aspergillus niger FDAARGOS_311)
ATGGCGGCTAATAAGCAGGGCAAGATGCAAAACCTCATCAACTACCGGAT
GAGAGTCACCCTCAATGATGGCCGACAGATGACGGGACAGATGCTCGCTT
TCGATAAGCACATGAACCTTGTCCTCGCCGATACAGAAGAATTCCGTCGC
GTCAAGCGCAAGTCCAAGCCCGCCGCCGGTTCGACCAACGCACCTCTTGT
TGAGGCCGAAGAAAAGCGCACCCTGGGCCTTACCATTGTTCGCGGTGTTG
GTGGCCCTCCCCCGCCGCCCGGCGGTTTTCCCGGCTTCCCTCCTGGTGGT
AGTTTCCCTGGAGTGCCGCCTCCGGGCTTCGCTGGTCGTGGTGGTGCCCC
TGGTGGACCTCCTGGCTTTGCTCCTCCCCGGGATTCGCTCCCCAGGGTGC
TCCTCCGGGTGCCTTCCAACCCCCACCGGGATTCCAGCCCCCTGGACAAG
GACGCGGATTCCCTCCACCCGGCTTTGGTGGACGGTGATTTGATAGTATG
TGCAGCAGCATGAATGGCGGCTAATAAGCAGGGCAAGATGCAAAACCTCA
TCAACTACCGGATGAGAGTCACCCTCAATGATGGCCGACAGATGACGGGA
CAGATGCTCGCTTTCGATAAGCACATGAACCTTGTCCTCGCCGATACAGA
AGAATTCCGTCGCGTCAAGCGCAAGTCCAAGCCCGCCGCCGGTTCGACCA
ACGCACCTCTTGTTGAGGCCGAAGAAAAGCGCACCCTGGGCCTTACCATT
GTTCGCGGTGTTGGTGGCCCTCCCCCGCCGCCCGGCGGTTTTCCCGGCTT
CCCTCCTGGTGGTAGTTTCCCTGGAGTGCCGCCTCCGGGCTTCGCTGGTC
GTGGTGGTGCCCCTGGTGGACCTCCTGGCTTTGCTCCTCCCCGGGATTCG
CTCCCCAGGGTGCTCCTCCGGGTGCCTTCCAACCCCCACCGGGATTCCAG
CCCCCTGGACAAGGACGCGGATTCCCTCCACCCGGCTTTGGTGGACGGTG
ATTTGATAGTATGTGCAGCAGCATGAATGGCGGCTAATAAGCAGGGCAAG
ATGCAAAACCTCATCAACTACCGGATGAGAGTCACCCTCAATGATGGCCG
ACAGATGACGGGACAGATGCTCGCTTTCGATAAGCACATGAACCTTGTCC
TCGCCGATACAGAAGAATTCCGTCGCGTCAAGCGCAAGTCCAAGCCCGCC
GCCGGTTCGACCAACGCACCTCTTGTTGAGGCCGAAGAAAAGCGCACCCT
GGGCCTTACCATTGTTCGCGGTGTTGGTGGCCCTCCCCCGCCGCCCGGCG
GTTTTCCCGGCTTCCCTCCTGGTGGTAGTTTCCCTGGAGTGCCGCCTCCG
GGCTTCGCTGGTCGTGGTGGTGCCCCTGGTGGACCTCCTGGCTTTGCTCC
TCCCCGGGATTCGCTCCCCAGGGTGCTCCTCCGGGTGCCTTCCAACCCCC
ACCGGGATTCCAGCCCCCTGGACAAGGACGCGGATTCCCTCCACCCGGCT
TTGGTGGACGGTGATTTGATAGTATGTGCAGCAGCATGAATGGCGGCTAA
TAAGCAGGGCAAGATGCAAAACCTCATCAACTACCGGATGAGAGTCACCC
TCAATGATGGCCGACAGATGACGGGACAGATGCTCGCTTTCGATAAGCAC
ATGAACCTTGTCCTCGCCGATACAGAAGAATTCCGTCGCGTCAAGCGCAA
GTCCAAGCCCGCCGCCGGTTCGACCAACGCACCTCTTGTTGAGGCCGAAG
AAAAGCGCACCCTGGGCCTTACCATTGTTCGCGGTGTTGGTGGCCCTCCC
CCGCCGCCCGGCGGTTTTCCCGGCTTCCCTCCTGGTGGTAGTTTCCCTGG
AGTGCCGCCTCCGGGCTTCGCTGGTCGTGGTGGTGCCCCTGGTGGACCTC
CTGGCTTTGCTCCTCCCCGGGATTCGCTCCCCAGGGTGCTCCTCCGGGTG
CCTTCCAACCCCCACCGGGATTCCAGCCCCCTGGACAAGGACGCGGATTC
CCTCCACCCGGCTTTGGTGGACGGTGATTTGATAGTATGTGCAGCAGCAT
GAATGGCGGCTAATAAGCAGGGCAAGATGCAAAACCTCATCAACTACCGG
ATGAGAGTCACCCTCAATGATGGCCGACAGATGACGGGACAGATGCTCGC
TTTCGATAAGCACATGAACCTTGTCCTCGCCGATACAGAAGAATTCCGTC
GCGTCAAGCGCAAGTCCAAGCCCGCCGCCGGTTCGACCAACGCACCTCTT
GTTGAGGCCGAAGAAAAGCGCACCCTGGGCCTTACCATTGTTCGCGGTGT
TGGTGGCCCTCCCCCGCCGCCCGGCGGTTTTCCCGGCTTCCCTCCTGGTG
GTAGTTTCCCTGGAGTGCCGCCTCCGGGCTTCGCTGGTCGTGGTGGTGCC
CCTGGTGGACCTCCTGGCTTTGCTCCTCCCCGGGATTCGCTCCCCAGGGT
GCTCCTCCGGGTGCCTTCCAACCCCCACCGGGATTCCAGCCCCCTGGACA
AGGACGCGGATTCCCTCCACCCGGCTTTGGTGGACGGTGATTTGATAGTA
TGTGCAGCAGCATGAATGGCGGCTAATAAGCAGGGCAAGATGCAAAACCT
CATCAACTACCGGATGAGAGTCACCCTCAATGATGGCCGACAGATGACGG
GACAGATGCTCGCTTTCGATAAGCACATGAACCTTGTCCTCGCCGATACA
GAAGAATTCCGTCGCGTCAAGCGCAAGTCCAAGCCCGCCGCCGGTTCGAC
CAACGCACCTCTTGTTGAGGCCGAAGAAAAGCGCACCCTGGGCCTTACCA
TTGTTCGCGGTGTTGGTGGCCCTCCCCCGCCGCCCGGCGGTTTTCCCGGC
TTCCCTCCTGGTGGTAGTTTCCCTGGAGTGCCGCCTCCGGGCTTCGCTGG
TCGTGGTGGTGCCCCTGGTGGACCTCCTGGCTTTGCTCCTCCCCGGGATT
CGCTCCCCAGGGTGCTCCTCCGGGTGCCTTCCAACCCCCACCGGGATTCC
AGCCCCCTGGACAAGGACGCGGATTCCCTCCACCCGGCTTTGGTGGACGG
TGATTTGATAGTATGTGCAGCAGCATGAATGGCGGCTAATAAGCAGGGCA
AGATGCAAAACCTCATCAACTACCGGATGAGAGTCACCCTCAATGATGGC
CGACAGATGACGGGACAGATGCTCGCTTTCGATAAGCACATGAACCTTGT
CCTCGCCGATACAGAAGAATTCCGTCGCGTCAAGCGCAAGTCCAAGCCCG
CCGCCGGTTCGACCAACGCACCTCTTGTTGAGGCCGAAGAAAAGCGCACC
CTGGGCCTTACCATTGTTCGCGGTGTTGGTGGCCCTCCCCCGCCGCCCGG
CGGTTTTCCCGGCTTCCCTCCTGGTGGTAGTTTCCCTGGAGTGCCGCCTC
CGGGCTTCGCTGGTCGTGGTGGTGCCCCTGGTGGACCTCCTGGCTTTGCT
CCTCCCCGGGATTCGCTCCCCAGGGTGCTCCTCCGGGTGCCTTCCAACCC
CCACCGGGATTCCAGCCCCCTGGACAAGGACGCGGATTCCCTCCACCCGG
CTTTGGTGGACGGTGATTTGATAGTATGTGCAGCAGCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010920 |
| DBxref | InterPro:IPR001163 |
| DBxref | PFAM:PF01423 |
| Product | LSM domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:622865..623883 + |
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