You are here

Home

CAN33_5010-T1, CAN33_5010-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_5010-T1
Unique NameCAN33_5010-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:764370..765988+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_5010-T1 ID=CAN33_5010-T1|Name=CAN33_5010-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1619bp|location=Sequence derived from alignment at NKJJ01000019.1:764370..765988+ (Aspergillus niger FDAARGOS_311)
ATGCGTCTTTCACTTCTCCTGGCGGGCGCCATTAACCTGGTTGCTACCCA
GGCTATCGCAACCTCGCGTTGTACTCCTGAGACCTTCACTCCCCATCTTT
CTTCCAACGCCTCTCTCGTTTACGCAGTTCCATATGGACCCAACGATACC
TTTGTTGGCCCGCTGGGCAACTACTCCGGTCTCCCGGAGTACTGCGCCGT
CTACGTTAACGTGAGCTCGTCTGCTACCTCATCCTACGAATTCGGCCTTT
GGCTGCCCATCAACACTTGGAACAAGCGCTACATGGCCTATGGCAATGGT
GGCCTCACTGGCATGATCGCCTTTGCTGATATGGCACCCGGTCTTTTCTA
CGGTTTTGCTACCGTCTCCACGAACACTGGACACAACTCCTCCGTGACCG
AGGCTGGCGATGCAGGCTGGGCCCTCAACGACCCTGAGACTCGTACTGAC
TGGGGATGGCGTGCACTCCATGGCTCTGTCGCTCTTGGCAAGGAGCTTAC
TGAGGCCTTCTACAGCGAAGATATCAGCTATTCCTACTACGCCGGTTGCT
CCACTGGTGGTCGCCAGGGTCTGAAGTCCGTCCAAATGTTCCCGGACGAC
TTCGATGGTGTCCTCGCCGGTGCTTGCGCTTGGTGGACCACCCATCAGCA
AAACTGGGATCTCAAGCTCGCCACCTACAACCTCCCCAACAATGCCAGCC
ACCACATCACCGAGACTCAGGTGGATGCTTTGGCCACTGAAGTCCTCCGT
CAGTGCGACGAAGTTGATGGCGTCAAGGATAACATTATCATGAACGGCTA
TGCCTGCGACTTCCGTCCTGAGACCCTTCTTTGTGACGGTCCCTCCGCCA
ACAAGTCGACCTGTTTCACCGCCGATCAGATCGACACTGTCTACAAGATC
TACAGCCCCTGGGTTGAGACCAACGACTCCTTTGTCTTCCCCAGCTTCGC
CTACGGTGCCGAAACCCAGTTCGCTCAGATGATCATGACCGACGACGACG
AGCAGGACAGCCCCAGTGGTATTGCCTACCCCGTGACTTTGTCTACAACG
ATGCCAACTGGCCTTGGCAAAACCTGGACTACTCGACCATTGAGCTGTCC
GATCGACTGGACCCCGGTAATGCCACCGCCGGTGACTTCGATCTCCGTCC
CTTCAAGAACAAGGGTGGTAAGCTGATCCATTACCACGGATTTGCTGATG
GAGAGATCCCCACTGGCTCCAGCATCTACTACTACAAGCAGGTCCAGAAG
ATGCTTACCCCTCTTGGCATCGACCTCGATGACTTCTACCGCTTCTTCTT
GATCCCTGGTATGGAGCACTGCTTGGACTCCGTCCACGATGCTCCGTGGT
ACATCGCCTCGGCTAACCAGCCCGGCGGCCTGACCGGCACCAATGTCTGG
GGTGTGCCTGGTTACCGTGACCGGAAGCATGATGCCATCCTGGCTTTGAT
GGCCTGGGTGGAGAATGGCATCGCTCCTGATGAGCTGATCGCGACCAAGT
TCGTTGATGACACCCCCGCGGAAGGTGTGCAGGCTCAGCGCCCTCTCTGC
GTCTACCCCAAGGAGGCCAAGTATGTTGGAGGTAACTGGAACAAGACCAG
CGCGTTCGAGTGCCGGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:764370..765988+

>CAN33_5010-T1 ID=CAN33_5010-T1|Name=CAN33_5010-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3114bp|location=Sequence derived from alignment at NKJJ01000019.1:764370..765988+ (Aspergillus niger FDAARGOS_311)
ATGCGTCTTTCACTTCTCCTGGCGGGCGCCATTAACCTGGTTGCTACCCA
GGCTATCGCAACCTCGCGTTGTACTCCTGAGACCTTCACTCCCCATCTTT
CTTCCAACGCCTCTCTCGTTTACGCAGTTCCATATGGACCCAACGATACC
TTTGTTGGCCCGCTGGGCAACTACTCCGGTCTCCCGGAGTACTGCGCCGT
CTACGTTAACGTGAGCTCGTCTGCTACCTCATCCTACGAATTCGGCCTTT
GGCTGCCCATCAACACTTGGAACAAGCGCTACATGGCCTATGGCAATGGT
GGCCTCACTGGCATGATCGCCTTTGCTGATATGGCACCCGGTCTTTTCTA
CGGTTTTGCTACCGTCTCCACGAACACTGGACACAACTCCTCCGTGACCG
AGGCTGGCGATGCAGGCTGGGCCCTCAACGACCCTGAGACTCGTACTGAC
TGGGGATGGCGTGCACTCCATGGCTCTGTCGCTCTTGGCAAGGAGCTTAC
TGAGGCCTTCTACAGCGAAGATATCAGCTATTCCTACTACGCCGGTTGCT
CCACTGGTGGTCGCCAGGGTCTGAAGTCCGTCCAAATGTTCCCGGACGAC
TTCGATGGTGTCCTCGCCGGTGCTTGCGCTTGGTGGACCACCCATCAGCA
AAACTGGGATCTCAAGCTCGCCACCTACAACCTCCCCAACAATGCCAGCC
ACCACATCACCGAGACTCAGGTGGATGCTTTGGCCACTGAAGTCCTCCGT
CAGTGCGACGAAGTTGATGGCGTCAAGGATAACATTATCATGAACGGCTA
TGCCTGCGACTTCCGTCCTGAGACCCTTCTTTGTGACGGTCCCTCCGCCA
ACAAGTCGACCTGTTTCACCGCCGATCAGATCGACACTGTCTACAAGATC
TACAGCCCCTGGGTTGAGACCAACGACTCCTTTGTCTTCCCCAGCTTCGC
CTACGGTGCCGAAACCCAGTTCGCTCAGATGATCATGACCGACGACGACG
AGCAGGACAGCCCCAGTGGTATTGCCTACCCCCTGTCCGATCGACTGGAC
CCCGGTAATGCCACCGCCGGTGACTTCGATCTCCGTCCCTTCAAGAACAA
GGGTGGTAAGCTGATCCATTACCACGGATTTGCTGATGGAGAGATCCCCA
CTGGCTCCAGCATCTACTACTACAAGCAGGTCCAGAAGATGCTTACCCCT
CTTGGCATCGACCTCGATGACTTCTACCGCTTCTTCTTGATCCCTGGTAT
GGAGCACTGCTTGGACTCCGTCCACGATGCTCCGTGGTACATCGCCTCGG
CTAACCAGCCCGGCGGCCTGACCGGCACCAATGTCTGGGGTGTGCCTGGT
TACCGTGACCGGAAGCATGATGCCATCCTGGCTTTGATGGCCTGGGTGGA
GAATGGCATCGCTCCTGATGAGCTGATCGCGACCAAGTTCGTTGATGACA
CCCCCGCGGAAGGTGTGCAGGCTCAGCGCCCTCTCTGCGTCTACCCCAAG
GAGGCCAAGTATGTTGGAGGTAACTGGAACAAGACCAGCGCGTTCGAGTG
CCGGTAAATGCGTCTTTCACTTCTCCTGGCGGGCGCCATTAACCTGGTTG
CTACCCAGGCTATCGCAACCTCGCGTTGTACTCCTGAGACCTTCACTCCC
CATCTTTCTTCCAACGCCTCTCTCGTTTACGCAGTTCCATATGGACCCAA
CGATACCTTTGTTGGCCCGCTGGGCAACTACTCCGGTCTCCCGGAGTACT
GCGCCGTCTACGTTAACGTGAGCTCGTCTGCTACCTCATCCTACGAATTC
GGCCTTTGGCTGCCCATCAACACTTGGAACAAGCGCTACATGGCCTATGG
CAATGGTGGCCTCACTGGCATGATCGCCTTTGCTGATATGGCACCCGGTC
TTTTCTACGGTTTTGCTACCGTCTCCACGAACACTGGACACAACTCCTCC
GTGACCGAGGCTGGCGATGCAGGCTGGGCCCTCAACGACCCTGAGACTCG
TACTGACTGGGGATGGCGTGCACTCCATGGCTCTGTCGCTCTTGGCAAGG
AGCTTACTGAGGCCTTCTACAGCGAAGATATCAGCTATTCCTACTACGCC
GGTTGCTCCACTGGTGGTCGCCAGGGTCTGAAGTCCGTCCAAATGTTCCC
GGACGACTTCGATGGTGTCCTCGCCGGTGCTTGCGCTTGGTGGACCACCC
ATCAGCAAAACTGGGATCTCAAGCTCGCCACCTACAACCTCCCCAACAAT
GCCAGCCACCACATCACCGAGACTCAGGTGGATGCTTTGGCCACTGAAGT
CCTCCGTCAGTGCGACGAAGTTGATGGCGTCAAGGATAACATTATCATGA
ACGGCTATGCCTGCGACTTCCGTCCTGAGACCCTTCTTTGTGACGGTCCC
TCCGCCAACAAGTCGACCTGTTTCACCGCCGATCAGATCGACACTGTCTA
CAAGATCTACAGCCCCTGGGTTGAGACCAACGACTCCTTTGTCTTCCCCA
GCTTCGCCTACGGTGCCGAAACCCAGTTCGCTCAGATGATCATGACCGAC
GACGACGAGCAGGACAGCCCCAGTGGTATTGCCTACCCCCTGTCCGATCG
ACTGGACCCCGGTAATGCCACCGCCGGTGACTTCGATCTCCGTCCCTTCA
AGAACAAGGGTGGTAAGCTGATCCATTACCACGGATTTGCTGATGGAGAG
ATCCCCACTGGCTCCAGCATCTACTACTACAAGCAGGTCCAGAAGATGCT
TACCCCTCTTGGCATCGACCTCGATGACTTCTACCGCTTCTTCTTGATCC
CTGGTATGGAGCACTGCTTGGACTCCGTCCACGATGCTCCGTGGTACATC
GCCTCGGCTAACCAGCCCGGCGGCCTGACCGGCACCAATGTCTGGGGTGT
GCCTGGTTACCGTGACCGGAAGCATGATGCCATCCTGGCTTTGATGGCCT
GGGTGGAGAATGGCATCGCTCCTGATGAGCTGATCGCGACCAAGTTCGTT
GATGACACCCCCGCGGAAGGTGTGCAGGCTCAGCGCCCTCTCTGCGTCTA
CCCCAAGGAGGCCAAGTATGTTGGAGGTAACTGGAACAAGACCAGCGCGT
TCGAGTGCCGGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_5010CAN33_5010Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5010-T1.exon1CAN33_5010-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_5010-T1.exon2CAN33_5010-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5010-T1.cdsCAN33_5010-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5010-T1CAN33_5010-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-16)
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR011118
DBxrefPFAM:PF07519
ProductTannase and feruloyl esterase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:764370..765988 +
Powered by Drupal