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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:1168551..1169200+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_5650-T1 ID=CAN33_5650-T1|Name=CAN33_5650-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=650bp|location=Sequence derived from alignment at NKJJ01000019.1:1168551..1169200+ (Aspergillus niger FDAARGOS_311)
ATGCCTCGAACTGCTATCTTCGTCATCGACATCCAGAACCACCTGGCCGT
TGATTCAACCTCTCGCGTCCCTCAAGCGGATCGCGTCATCAAAGCCTCTG
AAGAGATTCTACAGACAGCTCGGTCCATCACCGACTCCAATGGAAACAGC
AGCAGTCCACTCATTGTTTTTATTCAGCACGAAGAGTCTCCGAATGATGG
AGCTCTGGTAAAGGGGACTGAGCCCTGGGAGCTCGTCTTTCATCCTCGCG
CGGACGCAGAGGGTGAAATTTTGGTAGCGAAGAAGACAGGTACAGTACTC
AACATGCTCGATGAGAATCGATCTAGCTAATCATCTCGTTACATTTTACA
GGTGACACATTCAAATCCAACCGCGACCTCGCGCAGAGGCTGCGCAACGC
CAACGTCACCGAAATCGTCGCGTTCGGCCTGCAGAGCGATGCCTGCGTCG
AAGCAACATGTACCGGCGCGCTGGCAGCAGGTTTCCACGTAACTGTACTG
GCAGGCGCACATTCTACCTACGACGCCGATGGAAAGACCGCCCAGGAAAT
CGAGCGTGAAGTCGAACTTCGCCTCTCGACACGCGGCGCTCGTGTTGTCC
GGTGGGAGAAGGCGATCGCGAAATGGGCGGAGAAGCAACAGGTTGTCTGA
back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:1168551..1169200+ >CAN33_5650-T1 ID=CAN33_5650-T1|Name=CAN33_5650-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1176bp|location=Sequence derived from alignment at NKJJ01000019.1:1168551..1169200+ (Aspergillus niger FDAARGOS_311)
ATGCCTCGAACTGCTATCTTCGTCATCGACATCCAGAACCACCTGGCCGT
TGATTCAACCTCTCGCGTCCCTCAAGCGGATCGCGTCATCAAAGCCTCTG
AAGAGATTCTACAGACAGCTCGGTCCATCACCGACTCCAATGGAAACAGC
AGCAGTCCACTCATTGTTTTTATTCAGCACGAAGAGTCTCCGAATGATGG
AGCTCTGGTAAAGGGGACTGAGCCCTGGGAGCTCGTCTTTCATCCTCGCG
CGGACGCAGAGGGTGAAATTTTGGTAGCGAAGAAGACAGGTGACACATTC
AAATCCAACCGCGACCTCGCGCAGAGGCTGCGCAACGCCAACGTCACCGA
AATCGTCGCGTTCGGCCTGCAGAGCGATGCCTGCGTCGAAGCAACATGTA
CCGGCGCGCTGGCAGCAGGTTTCCACGTAACTGTACTGGCAGGCGCACAT
TCTACCTACGACGCCGATGGAAAGACCGCCCAGGAAATCGAGCGTGAAGT
CGAACTTCGCCTCTCGACACGCGGCGCTCGTGTTGTCCGGTGGGAGAAGG
CGATCGCGAAATGGGCGGAGAAGCAACAGGTTGTCTGAATGCCTCGAACT
GCTATCTTCGTCATCGACATCCAGAACCACCTGGCCGTTGATTCAACCTC
TCGCGTCCCTCAAGCGGATCGCGTCATCAAAGCCTCTGAAGAGATTCTAC
AGACAGCTCGGTCCATCACCGACTCCAATGGAAACAGCAGCAGTCCACTC
ATTGTTTTTATTCAGCACGAAGAGTCTCCGAATGATGGAGCTCTGGTAAA
GGGGACTGAGCCCTGGGAGCTCGTCTTTCATCCTCGCGCGGACGCAGAGG
GTGAAATTTTGGTAGCGAAGAAGACAGGTGACACATTCAAATCCAACCGC
GACCTCGCGCAGAGGCTGCGCAACGCCAACGTCACCGAAATCGTCGCGTT
CGGCCTGCAGAGCGATGCCTGCGTCGAAGCAACATGTACCGGCGCGCTGG
CAGCAGGTTTCCACGTAACTGTACTGGCAGGCGCACATTCTACCTACGAC
GCCGATGGAAAGACCGCCCAGGAAATCGAGCGTGAAGTCGAACTTCGCCT
CTCGACACGCGGCGCTCGTGTTGTCCGGTGGGAGAAGGCGATCGCGAAAT
GGGCGGAGAAGCAACAGGTTGTCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000191.2 |
| Note | antiSMASH:Cluster_10000191.3 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR000868 |
| DBxref | InterPro:IPR036380 |
| DBxref | PFAM:PF00857 |
| Product | Isochorismatase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:1168551..1169200 + |
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