You are here

Home

CAN33_50450-T1, CAN33_50450-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50450-T1
Unique NameCAN33_50450-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:238091..239895+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50450-T1 ID=CAN33_50450-T1|Name=CAN33_50450-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1805bp|location=Sequence derived from alignment at NKJJ01000020.1:238091..239895+ (Aspergillus niger FDAARGOS_311)
ATGGCCTCTATCTACATTGACGAAGATGTCGGCAGGGACGACTCGACCGC
CAACGGAACTGAATCTGCCCCCTACAAGACCCTCCTTCATGCTTTCATGC
AGCACGCTCCTACCGATGGCAACCAGTACCTGACCCGCAAGTCCCAAACT
GAGCCCACGGAGGCAGGTGCCGACCCCGCGTCTAAGTTGGAGTGGAAGCC
GGCCACGAAGTCGGCGGTCAAGAAGGCTACCAACCTGTATGAGCAACGGA
AGAGAAAGGCTGCGAAGGAACAAGAATTGGCTATTCGTGAGAAGCAGGAG
GCCGAGAAGCGACAGGCTATTCTTGAGGAGGCGAAGAAGGTCGTTCTTAA
GGAGGACACATCACTTCCCAAGCCCACCAAGATCCGTCTTGATGTGACTG
ATCCGGCCGTTGTCACGCTGGGATCTCCCGAGTCGGAGACTCCTGGAACT
CGTGTTCGTGTAGTTGGAAGAGTTCACCGTCTGCGTGCTCAGAAGGATGT
TATTTTTCTCACTCTTACCGATGGTTATGGCTACCTGCAGTGTGTCCTGA
CTGGAAATCTGTGTAAGACTTACGATGCCATGACTCTTACCCTTGAGACT
TCGATTGCTATCCATGGTGAGATGCGTGCCGTCCCACCTAAGCAGCATGC
TCCCAACAACCGTGAGCTGCACGCCGATTTCTACACTATCATTGGCCGCG
CTGCTGGTGACAAGGAGGCCATCACCACCAGGGTGGCCCCTGATGCTGAT
CCGCAAACCCTCTATGACAACCGCCACCTCGTTCTCCGTGGTGAGACCGC
CTCGTCAGTCATGAAGGTTCGCGCGGCTACCCTCCGGGCTTTCCGCAAGA
CCTTTGAAGAGAACCGTATGCTGGAAGTCACCCCTCCTGCCATGGTCCAG
ACTCAGGTGGAGGGTGGAAGCACCTTGTTCGGGTTCGACTACTATGGCGA
GAATGCTTATTTGACCCAGTCCTCCCAGCTCTACTTGGAGACTTGCCTCC
CCTCCCTTGGCGACGTCTTCTGTGTGTGCCCTTCTTTCCGTGCTGAGAAG
TCGCTTACCCGTCGCCATCTGTCCGAGTACACTCACATCGAGGCTGAGCT
TGACTTTATCACTTTCAACGACCTCCTCGATCACCTTGAGAACGTTATCT
GCCGTGTTATTGATCTGACTCTGGCTGAGCCGGCCACCAAGGCCCTCATT
GAGAAGCTCAACCCCGACTTCAAGCCCCCTAGCCGCCCCTTCAAGCGGAT
GAAGTACTCTGAGGCCATTGAATGGCTGCGGGAACACGATATTCCCAACG
AGGAGGGCAAGCCTCACGAGTTCGGCGATGACATTGCCGAAGCTGCTGAG
AGAAAGATGACCGATATCATCAACCAGCCCATCTTCCTAACCCACTTCCC
CGCTGAGATCAAGGCCTTCTACATGAAGAAGGATGTCGAAGACCGCCGTG
TCACTGAGAGTGTGGACGTTCTCATGCCTGGTGTTGGTGAGATTGTCGGT
GGTAGTATGAGAATGGATGACTGGGATGAGCTCATGGCCGCCTACAAGCA
CGAAGGCATGGATCCTTCCCCGTACTACTGGTACACCGACCAGCGCAAGT
AAGTCAAGCCTTCATGAGCCTCTCTCCGCCATGAATACACTTTAAGAGAC
GTATGACTAATCTAATTCAACAACATAGGTACGGTACTTCCCCTCACGGT
GGTTACGGTCTTGGTCTCGAACGTTTCCTGGCTTGGTTGTGTGCTCGTTA
TACCGTTCGCGACTGCTCCTTGTATCCTCGTTTCACAGGCCGTTGCACGC
CTTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:238091..239895+

>CAN33_50450-T1 ID=CAN33_50450-T1|Name=CAN33_50450-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3450bp|location=Sequence derived from alignment at NKJJ01000020.1:238091..239895+ (Aspergillus niger FDAARGOS_311)
ATGGCCTCTATCTACATTGACGAAGATGTCGGCAGGGACGACTCGACCGC
CAACGGAACTGAATCTGCCCCCTACAAGACCCTCCTTCATGCTTTCATGC
AGCACGCTCCTACCGATGGCAACCAGTACCTGACCCGCAAGTCCCAAACT
GAGCCCACGGAGGCAGGTGCCGACCCCGCGTCTAAGTTGGAGTGGAAGCC
GGCCACGAAGTCGGCGGTCAAGAAGGCTACCAACCTGTATGAGCAACGGA
AGAGAAAGGCTGCGAAGGAACAAGAATTGGCTATTCGTGAGAAGCAGGAG
GCCGAGAAGCGACAGGCTATTCTTGAGGAGGCGAAGAAGGTCGTTCTTAA
GGAGGACACATCACTTCCCAAGCCCACCAAGATCCGTCTTGATGTGACTG
ATCCGGCCGTTGTCACGCTGGGATCTCCCGAGTCGGAGACTCCTGGAACT
CGTGTTCGTGTAGTTGGAAGAGTTCACCGTCTGCGTGCTCAGAAGGATGT
TATTTTTCTCACTCTTACCGATGGTTATGGCTACCTGCAGTGTGTCCTGA
CTGGAAATCTGTGTAAGACTTACGATGCCATGACTCTTACCCTTGAGACT
TCGATTGCTATCCATGGTGAGATGCGTGCCGTCCCACCTAAGCAGCATGC
TCCCAACAACCGTGAGCTGCACGCCGATTTCTACACTATCATTGGCCGCG
CTGCTGGTGACAAGGAGGCCATCACCACCAGGGTGGCCCCTGATGCTGAT
CCGCAAACCCTCTATGACAACCGCCACCTCGTTCTCCGTGGTGAGACCGC
CTCGTCAGTCATGAAGGTTCGCGCGGCTACCCTCCGGGCTTTCCGCAAGA
CCTTTGAAGAGAACCGTATGCTGGAAGTCACCCCTCCTGCCATGGTCCAG
ACTCAGGTGGAGGGTGGAAGCACCTTGTTCGGGTTCGACTACTATGGCGA
GAATGCTTATTTGACCCAGTCCTCCCAGCTCTACTTGGAGACTTGCCTCC
CCTCCCTTGGCGACGTCTTCTGTGTGTGCCCTTCTTTCCGTGCTGAGAAG
TCGCTTACCCGTCGCCATCTGTCCGAGTACACTCACATCGAGGCTGAGCT
TGACTTTATCACTTTCAACGACCTCCTCGATCACCTTGAGAACGTTATCT
GCCGTGTTATTGATCTGACTCTGGCTGAGCCGGCCACCAAGGCCCTCATT
GAGAAGCTCAACCCCGACTTCAAGCCCCCTAGCCGCCCCTTCAAGCGGAT
GAAGTACTCTGAGGCCATTGAATGGCTGCGGGAACACGATATTCCCAACG
AGGAGGGCAAGCCTCACGAGTTCGGCGATGACATTGCCGAAGCTGCTGAG
AGAAAGATGACCGATATCATCAACCAGCCCATCTTCCTAACCCACTTCCC
CGCTGAGATCAAGGCCTTCTACATGAAGAAGGATGTCGAAGACCGCCGTG
TCACTGAGAGTGTGGACGTTCTCATGCCTGGTGTTGGTGAGATTGTCGGT
GGTAGTATGAGAATGGATGACTGGGATGAGCTCATGGCCGCCTACAAGCA
CGAAGGCATGGATCCTTCCCCGTACTACTGGTACACCGACCAGCGCAAGT
ACGGTACTTCCCCTCACGGTGGTTACGGTCTTGGTCTCGAACGTTTCCTG
GCTTGGTTGTGTGCTCGTTATACCGTTCGCGACTGCTCCTTGTATCCTCG
TTTCACAGGCCGTTGCACGCCTTAGATGGCCTCTATCTACATTGACGAAG
ATGTCGGCAGGGACGACTCGACCGCCAACGGAACTGAATCTGCCCCCTAC
AAGACCCTCCTTCATGCTTTCATGCAGCACGCTCCTACCGATGGCAACCA
GTACCTGACCCGCAAGTCCCAAACTGAGCCCACGGAGGCAGGTGCCGACC
CCGCGTCTAAGTTGGAGTGGAAGCCGGCCACGAAGTCGGCGGTCAAGAAG
GCTACCAACCTGTATGAGCAACGGAAGAGAAAGGCTGCGAAGGAACAAGA
ATTGGCTATTCGTGAGAAGCAGGAGGCCGAGAAGCGACAGGCTATTCTTG
AGGAGGCGAAGAAGGTCGTTCTTAAGGAGGACACATCACTTCCCAAGCCC
ACCAAGATCCGTCTTGATGTGACTGATCCGGCCGTTGTCACGCTGGGATC
TCCCGAGTCGGAGACTCCTGGAACTCGTGTTCGTGTAGTTGGAAGAGTTC
ACCGTCTGCGTGCTCAGAAGGATGTTATTTTTCTCACTCTTACCGATGGT
TATGGCTACCTGCAGTGTGTCCTGACTGGAAATCTGTGTAAGACTTACGA
TGCCATGACTCTTACCCTTGAGACTTCGATTGCTATCCATGGTGAGATGC
GTGCCGTCCCACCTAAGCAGCATGCTCCCAACAACCGTGAGCTGCACGCC
GATTTCTACACTATCATTGGCCGCGCTGCTGGTGACAAGGAGGCCATCAC
CACCAGGGTGGCCCCTGATGCTGATCCGCAAACCCTCTATGACAACCGCC
ACCTCGTTCTCCGTGGTGAGACCGCCTCGTCAGTCATGAAGGTTCGCGCG
GCTACCCTCCGGGCTTTCCGCAAGACCTTTGAAGAGAACCGTATGCTGGA
AGTCACCCCTCCTGCCATGGTCCAGACTCAGGTGGAGGGTGGAAGCACCT
TGTTCGGGTTCGACTACTATGGCGAGAATGCTTATTTGACCCAGTCCTCC
CAGCTCTACTTGGAGACTTGCCTCCCCTCCCTTGGCGACGTCTTCTGTGT
GTGCCCTTCTTTCCGTGCTGAGAAGTCGCTTACCCGTCGCCATCTGTCCG
AGTACACTCACATCGAGGCTGAGCTTGACTTTATCACTTTCAACGACCTC
CTCGATCACCTTGAGAACGTTATCTGCCGTGTTATTGATCTGACTCTGGC
TGAGCCGGCCACCAAGGCCCTCATTGAGAAGCTCAACCCCGACTTCAAGC
CCCCTAGCCGCCCCTTCAAGCGGATGAAGTACTCTGAGGCCATTGAATGG
CTGCGGGAACACGATATTCCCAACGAGGAGGGCAAGCCTCACGAGTTCGG
CGATGACATTGCCGAAGCTGCTGAGAGAAAGATGACCGATATCATCAACC
AGCCCATCTTCCTAACCCACTTCCCCGCTGAGATCAAGGCCTTCTACATG
AAGAAGGATGTCGAAGACCGCCGTGTCACTGAGAGTGTGGACGTTCTCAT
GCCTGGTGTTGGTGAGATTGTCGGTGGTAGTATGAGAATGGATGACTGGG
ATGAGCTCATGGCCGCCTACAAGCACGAAGGCATGGATCCTTCCCCGTAC
TACTGGTACACCGACCAGCGCAAGTACGGTACTTCCCCTCACGGTGGTTA
CGGTCTTGGTCTCGAACGTTTCCTGGCTTGGTTGTGTGCTCGTTATACCG
TTCGCGACTGCTCCTTGTATCCTCGTTTCACAGGCCGTTGCACGCCTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006421asparaginyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
Vocabulary: Molecular Function
TermDefinition
GO:0004816asparagine-tRNA ligase activity
GO:0003676nucleic acid binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50450CAN33_50450Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50450-T1.exon1CAN33_50450-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_50450-T1.exon2CAN33_50450-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50450-T1.cdsCAN33_50450-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50450-T1CAN33_50450-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261CQG
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR006195
DBxrefInterPro:IPR004364
DBxrefInterPro:IPR004522
DBxrefInterPro:IPR004365
DBxrefInterPro:IPR002312
DBxrefPFAM:PF01336
DBxrefPFAM:PF00152
Productasparagine--tRNA ligase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:238091..239895 +
Powered by Drupal