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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:271347..272194- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_50500-T1 ID=CAN33_50500-T1|Name=CAN33_50500-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=848bp|location=Sequence derived from alignment at NKJJ01000020.1:271347..272194- (Aspergillus niger FDAARGOS_311)
ATGACCGACACAGCAGATGCCCCCCAAACCAACAAGGCCTTCGTGCCCCT
CGGTACCCCCTCCTTCCCTCCCCCAAAACACCACATATAACCACACCAAC
TAACCATTATCACCACTATTATTGCACCACAGAAAATAACCCCGAAGTAA
TGACCCACCTCGTCCGCCAACTCGGCCTCTCCCCAACCCTCGGCTTCACA
GACGTGTGGTCAATCGACAGCCCGGACCTCCTCGCCTTCATCCCCCGCCC
CTCCTACGCCCTCCTCCTCGTCTTCCCCGTCTCCGCCGCCTACGAAGCCA
CCCGCCGAACCGAAGACGCGCCTCTCCCTGATTACACCGGCTCAGGTCCC
AACGAGCCCGTCATGTGGTTCAAGCAAACCATCCGCAACGCCTGCGGGCT
AATCGGGCTCCTGCACGCCGTGTCGAACGGCACGCCGCGGAAGCACATCA
CCCCTGGGTCCGATCTAGATAACCTGCTCAAGGAAGCGGAGGGTTTGGGG
CCGATTCAGCGCGCGGATCTGTTGTATGAGAGTAAGGCGTTGGAGAGTGC
GCATGCCGATGCGGCGAAACTGGGGGATACGGATGCGCCGGCGGCCGAGG
ACTCGGTGGACTTGCATTTTGTGGCGTTTGTGAAGGGTGAGGATGGGACT
TTGTGGGAGTTGGATGGGAGGAGGAAGGGGCCGTTGGTTAGGGGGGTTCT
TGAGGAGGGGGAGGATGCGTTGAGTGAGAGGGCTTTGCAGTTGGGGGTAA
GAAGGTTCTTGGAGGTCGAGAAGGGGAGCGGGGATGGAGATTTGAGGTTT
AGTCTTGTTAGTTTGGGGGAGGTTTTTGACTGATTATCGAGTTAGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:271347..272194- >CAN33_50500-T1 ID=CAN33_50500-T1|Name=CAN33_50500-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1368bp|location=Sequence derived from alignment at NKJJ01000020.1:271347..272194- (Aspergillus niger FDAARGOS_311)
TGAGTCCCAACGAGCCCGTCATGTGGTTCAAGCAAACCATCCGCAACGCC
TGCGGGCTAATCGGGCTCCTGCACGCCGTGTCGAACGGCACGCCGCGGAA
GCACATCACCCCTGGGTCCGATCTAGATAACCTGCTCAAGGAAGCGGAGG
GTTTGGGGCCGATTCAGCGCGCGGATCTGTTGTATGAGAGTAAGGCGTTG
GAGAGTGCGCATGCCGATGCGGCGAAACTGGGGGATACGGATGCGCCGGC
GGCCGAGGACTCGGTGGACTTGCATTTTGTGGCGTTTGTGAAGGGTGAGG
ATGGGACTTTGTGGGAGTTGGATGGGAGGAGGAAGGGGCCGTTGGTTAGG
GGGGTTCTTGAGGAGGGGGAGGATGCGTTGAGTGAGAGGGCTTTGCAGTT
GGGGATGACCGACACAGCAGATGCCCCCCAAACCAACAAGGCCTTCGTGC
CCCTCGTGAGTCCCAACGAGCCCGTCATGTGGTTCAAGCAAACCATCCGC
AACGCCTGCGGGCTAATCGGGCTCCTGCACGCCGTGTCGAACGGCACGCC
GCGGAAGCACATCACCCCTGGGTCCGATCTAGATAACCTGCTCAAGGAAG
CGGAGGGTTTGGGGCCGATTCAGCGCGCGGATCTGTTGTATGAGAGTAAG
GCGTTGGAGAGTGCGCATGCCGATGCGGCGAAACTGGGGGATACGGATGC
GCCGGCGGCCGAGGACTCGGTGGACTTGCATTTTGTGGCGTTTGTGAAGG
GTGAGGATGGGACTTTGTGGGAGTTGGATGGGAGGAGGAAGGGGCCGTTG
GTTAGGGGGGTTCTTGAGGAGGGGGAGGATGCGTTGAGTGAGAGGGCTTT
GCAGTTGGGGATGACCGACACAGCAGATGCCCCCCAAACCAACAAGGCCT
TCGTGCCCCTCGTGAGTCCCAACGAGCCCGTCATGTGGTTCAAGCAAACC
ATCCGCAACGCCTGCGGGCTAATCGGGCTCCTGCACGCCGTGTCGAACGG
CACGCCGCGGAAGCACATCACCCCTGGGTCCGATCTAGATAACCTGCTCA
AGGAAGCGGAGGGTTTGGGGCCGATTCAGCGCGCGGATCTGTTGTATGAG
AGTAAGGCGTTGGAGAGTGCGCATGCCGATGCGGCGAAACTGGGGGATAC
GGATGCGCCGGCGGCCGAGGACTCGGTGGACTTGCATTTTGTGGCGTTTG
TGAAGGGTGAGGATGGGACTTTGTGGGAGTTGGATGGGAGGAGGAAGGGG
CCGTTGGTTAGGGGGGTTCTTGAGGAGGGGGAGGATGCGTTGAGTGAGAG
GGCTTTGCAGTTGGGGATGACCGACACAGCAGATGCCCCCCAAACCAACA
AGGCCTTCGTGCCCCTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004843 | thiol-dependent ubiquitin-specific protease activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0000836 |
| DBxref | InterPro:IPR038765 |
| DBxref | InterPro:IPR036959 |
| DBxref | InterPro:IPR001578 |
| DBxref | PFAM:PF01088 |
| Product | Ubiquitin carboxyl-terminal hydrolase family 1 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:271347..272194 - |
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