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CAN33_50920-T1, CAN33_50920-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50920-T1
Unique NameCAN33_50920-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:510022..511197-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50920-T1 ID=CAN33_50920-T1|Name=CAN33_50920-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1176bp|location=Sequence derived from alignment at NKJJ01000020.1:510022..511197- (Aspergillus niger FDAARGOS_311)
ATGACCGGCCCGTCCATCCAAGATCGTACCGGCGAGTTCCACGCCATTCT
GGGTCAAGCCCAGAAGCGCATGGCCGCCAACAAAGCCAGTTCACAGCGCC
AGGCTCTTTTGACAGATGCGCAGCGGAAACAAGCAAACGGTTCCGCAGAC
GGGCAGGGTGGCAAACGACGATCGGAGTTTGCCCGGAGAGCTGTGGAAAT
TGGACGAGGCATCACGGCGACGACTGCGAAGCTGCAGAGACTGGCCGAGT
GTGAGTGACTTTTGGACGGTCAGATGAATGGCGCTAATATTATTCGCAGT
GGCCAAGCGAAAGACACTCTTTGACGACAGACCGGTTGAGATTTCCGAGT
TGACGTTTGTGATCAAACAAGATCTCGCCTCGTTGAATCAGCAAATCGCC
TCGTTGCAAGCGCTTACTCTTTCACAACATCCTAAGAGCAATCGGTCGAA
GGCGGACCAGGAAGGAGAGCATAATGACAATGTACGTGCGACCAATATAA
AGACCGGAATGAAGCTAATGGGTTTAGGTGGTTGTCATGCTACAAGGAAA
ATTGGCAGATGTGGGAGCCAACTTCAAAGACGTCCTTGAAGTGCGCACAA
AGAACATCCAGGCCTCGCGATCCAGAACCGAGAACTTTGTCTCCTCAGTA
TCCTCAAAGACACATTCTGCCCTCGATACGCAGCGCTCCGATTCCCCACT
TTACAACACATCTGGACGGCGGACGCCCCAGCCGGGCGGCGCTTCCGATC
TACTGACTCTGGAACCCTCGAACCCGTCTCCACTCGGCCGCCCCTCCATG
CACTCAGATCAGCAACTACTGGTCATGGAGGAAGCCCAGACGAGCAACGC
CTATATCCAAGGGCGTGGTGAGGCAATTGATGCGATTGAACGCACCATCA
GCGAGCTGGGTGGTATCTTCGGCCAGCTTGCGCAGATGGTCAGCGAGCAG
TCCGACATGATCCAGCGGATAGATGCCAACACGGAAGATGTGGTGGATAA
CGTGCAGGGAGCGCATCGCGAGTTACTGAAGTACTGGACGCGGGTATCCG
GGAACCGATGGCTCATCGCCAAGATGTTTGGCGTTCTAATGGTAAGCTCA
TCCCGTAACTTGGTGGTCGAATGGCAGCTAACTTGTGCAGATCTTCTTCC
TACTCTGGGTGTTGATATCGGGATAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:510022..511197-

>CAN33_50920-T1 ID=CAN33_50920-T1|Name=CAN33_50920-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4128bp|location=Sequence derived from alignment at NKJJ01000020.1:510022..511197- (Aspergillus niger FDAARGOS_311)
ATCTTCTTCCTACTCTGGGTGTTGATATCGGGATAGGTGGTTGTCATGCT
ACAAGGAAAATTGGCAGATGTGGGAGCCAACTTCAAAGACGTCCTTGAAG
TGCGCACAAAGAACATCCAGGCCTCGCGATCCAGAACCGAGAACTTTGTC
TCCTCAGTATCCTCAAAGACACATTCTGCCCTCGATACGCAGCGCTCCGA
TTCCCCACTTTACAACACATCTGGACGGCGGACGCCCCAGCCGGGCGGCG
CTTCCGATCTACTGACTCTGGAACCCTCGAACCCGTCTCCACTCGGCCGC
CCCTCCATGCACTCAGATCAGCAACTACTGGTCATGGAGGAAGCCCAGAC
GAGCAACGCCTATATCCAAGGGCGTGGTGAGGCAATTGATGCGATTGAAC
GCACCATCAGCGAGCTGGGTGGTATCTTCGGCCAGCTTGCGCAGATGGTC
AGCGAGCAGTCCGACATGATCCAGCGGATAGATGCCAACACGGAAGATGT
GGTGGATAACGTGCAGGGAGCGCATCGCGAGTTACTGAAGTACTGGACGC
GGGTATCCGGGAACCGATGGCTCATCGCCAAGATGTTTGGCGTTCTAATG
TGGCCAAGCGAAAGACACTCTTTGACGACAGACCGGTTGAGATTTCCGAG
TTGACGTTTGTGATCAAACAAGATCTCGCCTCGTTGAATCAGCAAATCGC
CTCGTTGCAAGCGCTTACTCTTTCACAACATCCTAAGAGCAATCGGTCGA
AGGCGGACCAGGAAGGAGAGCATAATGACAATATGACCGGCCCGTCCATC
CAAGATCGTACCGGCGAGTTCCACGCCATTCTGGGTCAAGCCCAGAAGCG
CATGGCCGCCAACAAAGCCAGTTCACAGCGCCAGGCTCTTTTGACAGATG
CGCAGCGGAAACAAGCAAACGGTTCCGCAGACGGGCAGGGTGGCAAACGA
CGATCGGAGTTTGCCCGGAGAGCTGTGGAAATTGGACGAGGCATCACGGC
GACGACTGCGAAGCTGCAGAGACTGGCCGAGTATCTTCTTCCTACTCTGG
GTGTTGATATCGGGATAGGTGGTTGTCATGCTACAAGGAAAATTGGCAGA
TGTGGGAGCCAACTTCAAAGACGTCCTTGAAGTGCGCACAAAGAACATCC
AGGCCTCGCGATCCAGAACCGAGAACTTTGTCTCCTCAGTATCCTCAAAG
ACACATTCTGCCCTCGATACGCAGCGCTCCGATTCCCCACTTTACAACAC
ATCTGGACGGCGGACGCCCCAGCCGGGCGGCGCTTCCGATCTACTGACTC
TGGAACCCTCGAACCCGTCTCCACTCGGCCGCCCCTCCATGCACTCAGAT
CAGCAACTACTGGTCATGGAGGAAGCCCAGACGAGCAACGCCTATATCCA
AGGGCGTGGTGAGGCAATTGATGCGATTGAACGCACCATCAGCGAGCTGG
GTGGTATCTTCGGCCAGCTTGCGCAGATGGTCAGCGAGCAGTCCGACATG
ATCCAGCGGATAGATGCCAACACGGAAGATGTGGTGGATAACGTGCAGGG
AGCGCATCGCGAGTTACTGAAGTACTGGACGCGGGTATCCGGGAACCGAT
GGCTCATCGCCAAGATGTTTGGCGTTCTAATGTGGCCAAGCGAAAGACAC
TCTTTGACGACAGACCGGTTGAGATTTCCGAGTTGACGTTTGTGATCAAA
CAAGATCTCGCCTCGTTGAATCAGCAAATCGCCTCGTTGCAAGCGCTTAC
TCTTTCACAACATCCTAAGAGCAATCGGTCGAAGGCGGACCAGGAAGGAG
AGCATAATGACAATATGACCGGCCCGTCCATCCAAGATCGTACCGGCGAG
TTCCACGCCATTCTGGGTCAAGCCCAGAAGCGCATGGCCGCCAACAAAGC
CAGTTCACAGCGCCAGGCTCTTTTGACAGATGCGCAGCGGAAACAAGCAA
ACGGTTCCGCAGACGGGCAGGGTGGCAAACGACGATCGGAGTTTGCCCGG
AGAGCTGTGGAAATTGGACGAGGCATCACGGCGACGACTGCGAAGCTGCA
GAGACTGGCCGAGTATCTTCTTCCTACTCTGGGTGTTGATATCGGGATAG
GTGGTTGTCATGCTACAAGGAAAATTGGCAGATGTGGGAGCCAACTTCAA
AGACGTCCTTGAAGTGCGCACAAAGAACATCCAGGCCTCGCGATCCAGAA
CCGAGAACTTTGTCTCCTCAGTATCCTCAAAGACACATTCTGCCCTCGAT
ACGCAGCGCTCCGATTCCCCACTTTACAACACATCTGGACGGCGGACGCC
CCAGCCGGGCGGCGCTTCCGATCTACTGACTCTGGAACCCTCGAACCCGT
CTCCACTCGGCCGCCCCTCCATGCACTCAGATCAGCAACTACTGGTCATG
GAGGAAGCCCAGACGAGCAACGCCTATATCCAAGGGCGTGGTGAGGCAAT
TGATGCGATTGAACGCACCATCAGCGAGCTGGGTGGTATCTTCGGCCAGC
TTGCGCAGATGGTCAGCGAGCAGTCCGACATGATCCAGCGGATAGATGCC
AACACGGAAGATGTGGTGGATAACGTGCAGGGAGCGCATCGCGAGTTACT
GAAGTACTGGACGCGGGTATCCGGGAACCGATGGCTCATCGCCAAGATGT
TTGGCGTTCTAATGTGGCCAAGCGAAAGACACTCTTTGACGACAGACCGG
TTGAGATTTCCGAGTTGACGTTTGTGATCAAACAAGATCTCGCCTCGTTG
AATCAGCAAATCGCCTCGTTGCAAGCGCTTACTCTTTCACAACATCCTAA
GAGCAATCGGTCGAAGGCGGACCAGGAAGGAGAGCATAATGACAATATGA
CCGGCCCGTCCATCCAAGATCGTACCGGCGAGTTCCACGCCATTCTGGGT
CAAGCCCAGAAGCGCATGGCCGCCAACAAAGCCAGTTCACAGCGCCAGGC
TCTTTTGACAGATGCGCAGCGGAAACAAGCAAACGGTTCCGCAGACGGGC
AGGGTGGCAAACGACGATCGGAGTTTGCCCGGAGAGCTGTGGAAATTGGA
CGAGGCATCACGGCGACGACTGCGAAGCTGCAGAGACTGGCCGAGTATCT
TCTTCCTACTCTGGGTGTTGATATCGGGATAGGTGGTTGTCATGCTACAA
GGAAAATTGGCAGATGTGGGAGCCAACTTCAAAGACGTCCTTGAAGTGCG
CACAAAGAACATCCAGGCCTCGCGATCCAGAACCGAGAACTTTGTCTCCT
CAGTATCCTCAAAGACACATTCTGCCCTCGATACGCAGCGCTCCGATTCC
CCACTTTACAACACATCTGGACGGCGGACGCCCCAGCCGGGCGGCGCTTC
CGATCTACTGACTCTGGAACCCTCGAACCCGTCTCCACTCGGCCGCCCCT
CCATGCACTCAGATCAGCAACTACTGGTCATGGAGGAAGCCCAGACGAGC
AACGCCTATATCCAAGGGCGTGGTGAGGCAATTGATGCGATTGAACGCAC
CATCAGCGAGCTGGGTGGTATCTTCGGCCAGCTTGCGCAGATGGTCAGCG
AGCAGTCCGACATGATCCAGCGGATAGATGCCAACACGGAAGATGTGGTG
GATAACGTGCAGGGAGCGCATCGCGAGTTACTGAAGTACTGGACGCGGGT
ATCCGGGAACCGATGGCTCATCGCCAAGATGTTTGGCGTTCTAATGTGGC
CAAGCGAAAGACACTCTTTGACGACAGACCGGTTGAGATTTCCGAGTTGA
CGTTTGTGATCAAACAAGATCTCGCCTCGTTGAATCAGCAAATCGCCTCG
TTGCAAGCGCTTACTCTTTCACAACATCCTAAGAGCAATCGGTCGAAGGC
GGACCAGGAAGGAGAGCATAATGACAATATGACCGGCCCGTCCATCCAAG
ATCGTACCGGCGAGTTCCACGCCATTCTGGGTCAAGCCCAGAAGCGCATG
GCCGCCAACAAAGCCAGTTCACAGCGCCAGGCTCTTTTGACAGATGCGCA
GCGGAAACAAGCAAACGGTTCCGCAGACGGGCAGGGTGGCAAACGACGAT
CGGAGTTTGCCCGGAGAGCTGTGGAAATTGGACGAGGCATCACGGCGACG
ACTGCGAAGCTGCAGAGACTGGCCGAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50920CAN33_50920Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50920-T1CAN33_50920-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50920-T1.cdsCAN33_50920-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50920-T1.exon4CAN33_50920-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_50920-T1.exon3CAN33_50920-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_50920-T1.exon2CAN33_50920-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_50920-T1.exon1CAN33_50920-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09263J3H
DBxrefInterPro:IPR010989
DBxrefInterPro:IPR021538
DBxrefInterPro:IPR000727
DBxrefPFAM:PF11416
DBxrefPFAM:PF05739
ProductSNARE domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:510022..511197 -
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