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CAN33_52030-T1, CAN33_52030-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52030-T1
Unique NameCAN33_52030-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1210879..1213619-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52030-T1 ID=CAN33_52030-T1|Name=CAN33_52030-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2741bp|location=Sequence derived from alignment at NKJJ01000020.1:1210879..1213619- (Aspergillus niger FDAARGOS_311)
ATGGCCGTTGCAGCCAATGTGAGCGCGCTGACAGACGAGCTAATTATAGC
CGTTGCGAAGCCCGATAGAAAGGCATTGCACTCAAGCCCTTAATGTAAAG
CAGATCTCATGCTGACGCTCCTGTCCAGGACACTCCACATTTCAGGACCT
TAAAACGTCGGACTGAAGACACTTTCAAGTCGCATGCTTATGCGCGCACG
GATCAATTCGCCGTCGCCAGCCAACTTGAAGGACTGCAGGAGAAATTCCA
AGTCCTTTGTAGGGATGAATTGGCTGATGCTTTGCGTATCCGACTAACGG
AGCTGCAAGAGCACCAAAGCTCATGGTTCCCCGAAATACTATCATTACTT
CTGCAGCTGGCAGACCGCCCTGCTCAGCGGTCCAGGGTAGACCAGGTGGT
GACAGCAAAGCCCAGAGAGGAAGCGAAATCGCTTGTCTGGGATGAATTGG
ACGCCGCTGGATCGGCATATTGTGGCGAGGATATTTGGGAAGATGTAGAT
TATGGTGCTGATTCCTCTGATGAGGACCTTGCATCGGTGTCCACTGACAG
CTACCATACGCGCAATCAACCAGAAACGTCTGTCACAACAGAGGAAGACT
ACATGATTCCTGACGAAGTCTTCACATCTGGAGAGAACGACGAATTCATT
GAATCGATTGCTAATGCACAATTTTGGAGAAATGAAGAGAGCCCGGCCAC
TGAAAAAGCTGGCCCTGCTTCTCAAATTATTACTGAGCTCCAGGTAGTAA
GGGAGACTGTATTCATGTTGCAAGGTCTACCTACGTCTCTGTTCTGGCGA
TTCGATGGTAATGTTGAAATACATCGAAGATATACCATTGCAGACCTGTC
GAATGAGGCATTCGTCTCATTACTGCGATCACTGAGCTCGACAGGAGCTA
AACTGGATATCCTTAGGCAGTTTTGCAACACTCCACAGGAGATCCCTTAT
ATGCAAACGTTTCATCGGGGCTTGGAGAGCTGTCTTAGAGAGTTCGATTT
GTTTCTATCTAACGTGCAACACCAGTACCTTGCTCAGACATCAATCGTGT
CCATCAGTCTTCTGCAGCTCTCAGAAGATGTTTATCGGGAGTCCAGACTG
CCTTTGCTGTTGTCTGACCTGGTGTCTAGCTTGATGCCAAACACTTCAAA
TACTTCAAATACCGCTACGCAGTGTCTCGACTCACTTTATGATCTCGTGT
GCCTGACACAAGCTGCTGGTGATGATGGCTTATTTAAGGCCCTTGCCAAG
TTATTCTTCTCATGCTTCGAAACCTATGCACATCCCGTCCGTATGTGGAT
GGAGAAAGGCCAGTTGGATGATTCTGCAGCTGGATTTTTCATACGCAACA
GTCAAAGTGACAGTGATCTGCGAACGCTATGGCATGATTGGTACTCACTG
GATGCGATACTCCCGAATTCCCCGAAGTTTATCCAACCTTTTGCGTCCAA
GATCTTCATAACTGGCAAAAGCATGGTTTTTCTGCGACATCTGAATACGT
CTGAGGACGATGAGACTCCGCGGAAGGTCTCCTTAACACTGGACGAAGTT
TTACCGCCAGACTCATCTGCGTTCTGCCTTCCGTTCTCCGTTCTACTCGA
GTTTTCATTCGGAAAATTAGTTGATGAAAACCATGCCTACACTTCGGCTT
TGTTAAGGACGGAGCTTGGCCAGCAATGTGGTTTGTGGACATCCCTTCAA
GCACTGGAGTATATCTATCTCGGCAAAGACATGAGCATTTTCGGACCGAT
TGACAGCAAGATATTCGACCTCATGGACAGAGGGAAAGGTGCTTGGAGTG
ATCGATTCCTGCTTACTGAAGTGGCTCAAAGCGCCTTCGGTGCTTTGCCA
TTCATCGACCCTTCCCGGCTTCTCGTTCGAACACCCAAGGAAGCACACAG
CAATGCAGTAAGCCGCAGCCGCTCAGTCAAGGTGCTAGACGCCATATCGT
TCGACTACATCTTGCCCTGGCCTGTAGCCAATATAATCACGAAAGACACT
CTTATGGGATACCAACGCATCTCCACTTTCCTTATGCAACTCCGCAGAGC
AAAGCAAACGATAGTAAAGCAGCGCTTGCAACACAACAACCAATCTGACA
AAATTCAAGATTCAAGGAACAACACGCTGAGCTATGCTCTCAGACACAAC
ATGCTCTGGTTTCTCAACGCAATCTACAGCCATATGACTGATTTTGTCAT
CTCCGCAGCGACGAAGTCCTTGCGCAGTGACCTTTCTGCTTCTGCCGACG
TGGATGCCATGGTAGCGGCGCATCGCTCATTCATGCACTCCTTGGAGGAA
CAATGCCTTTTATCCACCAACCTGAATGCTCTTCACCAAGCTATCATCAC
AATCCTTGACCTCTGCGTCAGCTTTGCAGACATTCAAAACTCACGCTATG
GTGACCATAGCCTCGATCACGCGCGCACCGCCACCAAGAGCGCAAAATCT
ATGCATCGCAGGAACACACAGCGCTCTGAACCTGACCTGGATGACCCAAG
CGATGAGGACGATGACGATGACTCCGACTTAGACGAAGATAACCTCGCTG
CCTCGTTTCACGAAACCCACTACATGCAACGAGTACGAGATATCAAAGAC
CAGTTCAATCGTCTATTAGCGTTCATTGTGGCTGGTCTAAGGGGTGTAGG
GCGTGTCGACGGCCAACTTAGTTGGGAGATATTGGCCGAGAAGCTCGAGT
GGAGGAAGGCAAGTGGACAGCAGCAGAGTCTTATACTGTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1210879..1213619-

>CAN33_52030-T1 ID=CAN33_52030-T1|Name=CAN33_52030-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5262bp|location=Sequence derived from alignment at NKJJ01000020.1:1210879..1213619- (Aspergillus niger FDAARGOS_311)
GACACTCCACATTTCAGGACCTTAAAACGTCGGACTGAAGACACTTTCAA
GTCGCATGCTTATGCGCGCACGGATCAATTCGCCGTCGCCAGCCAACTTG
AAGGACTGCAGGAGAAATTCCAAGTCCTTTGTAGGGATGAATTGGCTGAT
GCTTTGCGTATCCGACTAACGGAGCTGCAAGAGCACCAAAGCTCATGGTT
CCCCGAAATACTATCATTACTTCTGCAGCTGGCAGACCGCCCTGCTCAGC
GGTCCAGGGTAGACCAGGTGGTGACAGCAAAGCCCAGAGAGGAAGCGAAA
TCGCTTGTCTGGGATGAATTGGACGCCGCTGGATCGGCATATTGTGGCGA
GGATATTTGGGAAGATGTAGATTATGGTGCTGATTCCTCTGATGAGGACC
TTGCATCGGTGTCCACTGACAGCTACCATACGCGCAATCAACCAGAAACG
TCTGTCACAACAGAGGAAGACTACATGATTCCTGACGAAGTCTTCACATC
TGGAGAGAACGACGAATTCATTGAATCGATTGCTAATGCACAATTTTGGA
GAAATGAAGAGAGCCCGGCCACTGAAAAAGCTGGCCCTGCTTCTCAAATT
ATTACTGAGCTCCAGGTAGTAAGGGAGACTGTATTCATGTTGCAAGGTCT
ACCTACGTCTCTGTTCTGGCGATTCGATGGTAATGTTGAAATACATCGAA
GATATACCATTGCAGACCTGTCGAATGAGGCATTCGTCTCATTACTGCGA
TCACTGAGCTCGACAGGAGCTAAACTGGATATCCTTAGGCAGTTTTGCAA
CACTCCACAGGAGATCCCTTATATGCAAACGTTTCATCGGGGCTTGGAGA
GCTGTCTTAGAGAGTTCGATTTGTTTCTATCTAACGTGCAACACCAGTAC
CTTGCTCAGACATCAATCGTGTCCATCAGTCTTCTGCAGCTCTCAGAAGA
TGTTTATCGGGAGTCCAGACTGCCTTTGCTGTTGTCTGACCTGGTGTCTA
GCTTGATGCCAAACACTTCAAATACTTCAAATACCGCTACGCAGTGTCTC
GACTCACTTTATGATCTCGTGTGCCTGACACAAGCTGCTGGTGATGATGG
CTTATTTAAGGCCCTTGCCAAGTTATTCTTCTCATGCTTCGAAACCTATG
CACATCCCGTCCGTATGTGGATGGAGAAAGGCCAGTTGGATGATTCTGCA
GCTGGATTTTTCATACGCAACAGTCAAAGTGACAGTGATCTGCGAACGCT
ATGGCATGATTGGTACTCACTGGATGCGATACTCCCGAATTCCCCGAAGT
TTATCCAACCTTTTGCGTCCAAGATCTTCATAACTGGCAAAAGCATGGTT
TTTCTGCGACATCTGAATACGTCTGAGGACGATGAGACTCCGCGGAAGGT
CTCCTTAACACTGGACGAAGTTTTACCGCCAGACTCATCTGCGTTCTGCC
TTCCGTTCTCCGTTCTACTCGAGTTTTCATTCGGAAAATTAGTTGATGAA
AACCATGCCTACACTTCGGCTTTGTTAAGGACGGAGCTTGGCCAGCAATG
TGGTTTGTGGACATCCCTTCAAGCACTGGAGTATATCTATCTCGGCAAAG
ACATGAGCATTTTCGGACCGATTGACAGCAAGATATTCGACCTCATGGAC
AGAGGGAAAGGTGCTTGGAGTGATCGATTCCTGCTTACTGAAGTGGCTCA
AAGCGCCTTCGGTGCTTTGCCATTCATCGACCCTTCCCGGCTTCTCGTTC
GAACACCCAAGGAAGCACACAGCAATGCAGTAAGCCGCAGCCGCTCAGTC
AAGGTGCTAGACGCCATATCGTTCGACTACATCTTGCCCTGGCCTGTAGC
CAATATAATCACGAAAGACACTCTTATGGGATACCAACGCATCTCCACTT
TCCTTATGCAACTCCGCAGAGCAAAGCAAACGATAGTAAAGCAGCGCTTG
CAACACAACAACCAATCTGACAAAATTCAAGATTCAAGGAACAACACGCT
GAGCTATGCTCTCAGACACAACATGCTCTGGTTTCTCAACGCAATCTACA
GCCATATGACTGATTTTGTCATCTCCGCAGCGACGAAGTCCTTGCGCAGT
GACCTTTCTGCTTCTGCCGACGTGGATGCCATGGTAGCGGCGCATCGCTC
ATTCATGCACTCCTTGGAGGAACAATGCCTTTTATCCACCAACCTGAATG
CTCTTCACCAAGCTATCATCACAATCCTTGACCTCTGCGTCAGCTTTGCA
GACATTCAAAACTCACGCTATGGTGACCATAGCCTCGATCACGCGCGCAC
CGCCACCAAGAGCGCAAAATCTATGCATCGCAGGAACACACAGCGCTCTG
AACCTGACCTGGATGACCCAAGCGATGAGGACGATGACGATGACTCCGAC
TTAGACGAAGATAACCTCGCTGCCTCGTTTCACGAAACCCACTACATGCA
ACGAGTACGAGATATCAAAGACCAGTTCAATCGTCTATTAGCGTTCATTG
TGGCTGGTCTAAGGGGTGTAGGGCGTGTCGACGGCCAACTTAGTTGGGAG
ATATTGGCCGAGAAGCTCGAGTGGAGGAAGGCAAGTGGACAGCAGCAGAG
TCTTATACTGTAAATGGCCGTTGCAGCCAATGACACTCCACATTTCAGGA
CCTTAAAACGTCGGACTGAAGACACTTTCAAGTCGCATGCTTATGCGCGC
ACGGATCAATTCGCCGTCGCCAGCCAACTTGAAGGACTGCAGGAGAAATT
CCAAGTCCTTTGTAGGGATGAATTGGCTGATGCTTTGCGTATCCGACTAA
CGGAGCTGCAAGAGCACCAAAGCTCATGGTTCCCCGAAATACTATCATTA
CTTCTGCAGCTGGCAGACCGCCCTGCTCAGCGGTCCAGGGTAGACCAGGT
GGTGACAGCAAAGCCCAGAGAGGAAGCGAAATCGCTTGTCTGGGATGAAT
TGGACGCCGCTGGATCGGCATATTGTGGCGAGGATATTTGGGAAGATGTA
GATTATGGTGCTGATTCCTCTGATGAGGACCTTGCATCGGTGTCCACTGA
CAGCTACCATACGCGCAATCAACCAGAAACGTCTGTCACAACAGAGGAAG
ACTACATGATTCCTGACGAAGTCTTCACATCTGGAGAGAACGACGAATTC
ATTGAATCGATTGCTAATGCACAATTTTGGAGAAATGAAGAGAGCCCGGC
CACTGAAAAAGCTGGCCCTGCTTCTCAAATTATTACTGAGCTCCAGGTAG
TAAGGGAGACTGTATTCATGTTGCAAGGTCTACCTACGTCTCTGTTCTGG
CGATTCGATGGTAATGTTGAAATACATCGAAGATATACCATTGCAGACCT
GTCGAATGAGGCATTCGTCTCATTACTGCGATCACTGAGCTCGACAGGAG
CTAAACTGGATATCCTTAGGCAGTTTTGCAACACTCCACAGGAGATCCCT
TATATGCAAACGTTTCATCGGGGCTTGGAGAGCTGTCTTAGAGAGTTCGA
TTTGTTTCTATCTAACGTGCAACACCAGTACCTTGCTCAGACATCAATCG
TGTCCATCAGTCTTCTGCAGCTCTCAGAAGATGTTTATCGGGAGTCCAGA
CTGCCTTTGCTGTTGTCTGACCTGGTGTCTAGCTTGATGCCAAACACTTC
AAATACTTCAAATACCGCTACGCAGTGTCTCGACTCACTTTATGATCTCG
TGTGCCTGACACAAGCTGCTGGTGATGATGGCTTATTTAAGGCCCTTGCC
AAGTTATTCTTCTCATGCTTCGAAACCTATGCACATCCCGTCCGTATGTG
GATGGAGAAAGGCCAGTTGGATGATTCTGCAGCTGGATTTTTCATACGCA
ACAGTCAAAGTGACAGTGATCTGCGAACGCTATGGCATGATTGGTACTCA
CTGGATGCGATACTCCCGAATTCCCCGAAGTTTATCCAACCTTTTGCGTC
CAAGATCTTCATAACTGGCAAAAGCATGGTTTTTCTGCGACATCTGAATA
CGTCTGAGGACGATGAGACTCCGCGGAAGGTCTCCTTAACACTGGACGAA
GTTTTACCGCCAGACTCATCTGCGTTCTGCCTTCCGTTCTCCGTTCTACT
CGAGTTTTCATTCGGAAAATTAGTTGATGAAAACCATGCCTACACTTCGG
CTTTGTTAAGGACGGAGCTTGGCCAGCAATGTGGTTTGTGGACATCCCTT
CAAGCACTGGAGTATATCTATCTCGGCAAAGACATGAGCATTTTCGGACC
GATTGACAGCAAGATATTCGACCTCATGGACAGAGGGAAAGGTGCTTGGA
GTGATCGATTCCTGCTTACTGAAGTGGCTCAAAGCGCCTTCGGTGCTTTG
CCATTCATCGACCCTTCCCGGCTTCTCGTTCGAACACCCAAGGAAGCACA
CAGCAATGCAGTAAGCCGCAGCCGCTCAGTCAAGGTGCTAGACGCCATAT
CGTTCGACTACATCTTGCCCTGGCCTGTAGCCAATATAATCACGAAAGAC
ACTCTTATGGGATACCAACGCATCTCCACTTTCCTTATGCAACTCCGCAG
AGCAAAGCAAACGATAGTAAAGCAGCGCTTGCAACACAACAACCAATCTG
ACAAAATTCAAGATTCAAGGAACAACACGCTGAGCTATGCTCTCAGACAC
AACATGCTCTGGTTTCTCAACGCAATCTACAGCCATATGACTGATTTTGT
CATCTCCGCAGCGACGAAGTCCTTGCGCAGTGACCTTTCTGCTTCTGCCG
ACGTGGATGCCATGGTAGCGGCGCATCGCTCATTCATGCACTCCTTGGAG
GAACAATGCCTTTTATCCACCAACCTGAATGCTCTTCACCAAGCTATCAT
CACAATCCTTGACCTCTGCGTCAGCTTTGCAGACATTCAAAACTCACGCT
ATGGTGACCATAGCCTCGATCACGCGCGCACCGCCACCAAGAGCGCAAAA
TCTATGCATCGCAGGAACACACAGCGCTCTGAACCTGACCTGGATGACCC
AAGCGATGAGGACGATGACGATGACTCCGACTTAGACGAAGATAACCTCG
CTGCCTCGTTTCACGAAACCCACTACATGCAACGAGTACGAGATATCAAA
GACCAGTTCAATCGTCTATTAGCGTTCATTGTGGCTGGTCTAAGGGGTGT
AGGGCGTGTCGACGGCCAACTTAGTTGGGAGATATTGGCCGAGAAGCTCG
AGTGGAGGAAGGCAAGTGGACAGCAGCAGAGTCTTATACTGTAAATGGCC
GTTGCAGCCAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0043015gamma-tubulin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_52030CAN33_52030Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52030-T1CAN33_52030-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52030-T1.cdsCAN33_52030-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52030-T1.exon2CAN33_52030-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_52030-T1.exon1CAN33_52030-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR040457
DBxrefInterPro:IPR041470
DBxrefInterPro:IPR042241
DBxrefPFAM:PF17681
DBxrefPFAM:PF04130
ProductSpc97 / Spc98 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1210879..1213619 -
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