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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:1216324..1218134- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_52040-T1 ID=CAN33_52040-T1|Name=CAN33_52040-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1811bp|location=Sequence derived from alignment at NKJJ01000020.1:1216324..1218134- (Aspergillus niger FDAARGOS_311)
ATGGTAAATTGAACCAGTAAATTCAGGGTCTTCAGGGCACTTGCCACAAC
CTTCTGAAACCCGATCGATCCAGATTTCCGATGTAAGTATGTAATGTGCA
TGGTTTTAGATCTCTGCTACAAGGATATTTAGATTCAAGGTAGACTGGTC
TGACGCATTCCATTGGTTTTCGAGAAGCCCTGTCAACAAACCGCGACGTT
GTACTACTCCGAACTCCGGGTCCTCAGACCAAATATATATAATGGAGACA
GATGGGTTCGATTGGTACCATGCAGGAGCATCAGTAGCAGTAGCAGCATC
AAGGCTGGTAAATTACATTGGAGAAATAGGATTGATTCAAAATTGCGGTT
GAAAGGAGATATAAGGATCGCCATTTGGGGTGTAAACTCAAAAGTTCAGT
TGGAGTCCCGGGACGCGGACCACCAGGAGAACCTTCATTTCAAGCTCGAG
TCCCTGAATATGATACTGTGACCTTGTTTGATTGCTAACTAAGTACTACT
GATCATCAGTTTGGTGGTGATTAGTCATGCTTGTCCAAGTCACTCCGAGG
CATGAACGGACCAACCAATCAGACCCGGCAATCGGGGCACATCGACATCC
GCCAATCATCAACGGCATATAAAAATCCGGATGGGGGAGAGACCTGAGGC
AGCGAATGACAGCATGCCAATTTCTGCCTGAGGTATCCGCGAACTCGGGC
GCGAACGGGAAAGCCGCAAGCCGCAAAAGAGAAGCGGGCGATTATCAATG
ACGGGCTGACCTGACTGCTGGCCTGAGGCAGCAACAACCTCACACCACCC
GCAAAATCCTAGCGTAGCCGGCAGAACCTCTGACTTCGAACTTCGTCAAC
ACCTCGCCCGTCCTGATCTCCCCTCACCCACGTCCATTCGTCCACCTCCA
CAACCCACCCTCCTCTCGCCATGTCGCCCATCTCCGTCTTCCGCATCGCG
ACCCGCGCCGTCCGCCCTTCCGGCTTCATCAGAGCGGCTCAATTGCCCCG
TCCCCGGGTGCAGGCCCCCGTTGCTCTGGCTATCGCCCGTCCCAGCTTCA
GCACCTCCGCTAAGCGCTTCGGCGGTCACCACGAGGACGAGACATACGAG
GAGTTCTCTGCCAGGTATGCAACTATCTCCCATGAAGCCATTGGGTTCCG
ACGCTCCCTGCGGTGCACGATTCCCAATCACAGGGATTCCCACTACCAGT
TCCCCGAGACAATTCACACATCTTTCTTGATAATACCACACCAACCCGCG
AGTTCCGCCCATATAACTAACCACATCTGCCGGTAGATTCGAGAAGGAAT
TCGACGGTGTTCAGGATGTCTTCGAGCTCCAGGTAAGCTAATCTGCCCAT
ATTGCATGATTCCAATTCGTCCCTATCAATTCCCTTCCCCATAATCAGCA
AAGCTGCCATTGGCAGATAAAACCGGACCGTCCGCAGCCCCTTGGCGCCA
TATCAGACACCTTTGCTGACAAGTTACTGTTCTCCCATCCAGCGTAATCT
CAACAACTGCTTCGCCTACGATCTCGTTCCCTCCGTTGAGGTCCTTACCG
CTGCTCTGAAGGCTGCTCGTCGCGTCAACGACTACCCCACCGCTGTCCGG
ATCTTCGAGGGTGCGCTTCCTCCTCCCCATTCCATCACCGTTTCCTTCCC
ATGACAATTGAACTTACAATGTTTTTCTTTCTCTACAAATAGGTGTCAAG
GCCAAGGTCGAGACTCAGGAGCAGTACAAGCAATACCTTGAGGCCCTTGA
GGGTCTCCGCCAGGAGCTGGGTGTTGCTCTCCGTGAGGAGCTCTACCCCG
AGGAGGCGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:1216324..1218134- >CAN33_52040-T1 ID=CAN33_52040-T1|Name=CAN33_52040-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1935bp|location=Sequence derived from alignment at NKJJ01000020.1:1216324..1218134- (Aspergillus niger FDAARGOS_311)
GTGTCAAGGCCAAGGTCGAGACTCAGGAGCAGTACAAGCAATACCTTGAG
GCCCTTGAGGGTCTCCGCCAGGAGCTGGGTGTTGCTCTCCGTGAGGAGCT
CTACCCCGAGGAGGCGTAACGTAATCTCAACAACTGCTTCGCCTACGATC
TCGTTCCCTCCGTTGAGGTCCTTACCGCTGCTCTGAAGGCTGCTCGTCGC
GTCAACGACTACCCCACCGCTGTCCGGATCTTCGAGGATTCGAGAAGGAA
TTCGACGGTGTTCAGGATGTCTTCGAGCTCCAGGCCCCCGTTGCTCTGGC
TATCGCCCGTCCCAGCTTCAGCACCTCCGCTAAGCGCTTCGGCGGTCACC
ACGAGGACGAGACATACGAGGAGTTCTCTGCCAGATGGTGTCAAGGCCAA
GGTCGAGACTCAGGAGCAGTACAAGCAATACCTTGAGGCCCTTGAGGGTC
TCCGCCAGGAGCTGGGTGTTGCTCTCCGTGAGGAGCTCTACCCCGAGGAG
GCGTAACGTAATCTCAACAACTGCTTCGCCTACGATCTCGTTCCCTCCGT
TGAGGTCCTTACCGCTGCTCTGAAGGCTGCTCGTCGCGTCAACGACTACC
CCACCGCTGTCCGGATCTTCGAGGATTCGAGAAGGAATTCGACGGTGTTC
AGGATGTCTTCGAGCTCCAGGCCCCCGTTGCTCTGGCTATCGCCCGTCCC
AGCTTCAGCACCTCCGCTAAGCGCTTCGGCGGTCACCACGAGGACGAGAC
ATACGAGGAGTTCTCTGCCAGATGGTGTCAAGGCCAAGGTCGAGACTCAG
GAGCAGTACAAGCAATACCTTGAGGCCCTTGAGGGTCTCCGCCAGGAGCT
GGGTGTTGCTCTCCGTGAGGAGCTCTACCCCGAGGAGGCGTAACGTAATC
TCAACAACTGCTTCGCCTACGATCTCGTTCCCTCCGTTGAGGTCCTTACC
GCTGCTCTGAAGGCTGCTCGTCGCGTCAACGACTACCCCACCGCTGTCCG
GATCTTCGAGGATTCGAGAAGGAATTCGACGGTGTTCAGGATGTCTTCGA
GCTCCAGGCCCCCGTTGCTCTGGCTATCGCCCGTCCCAGCTTCAGCACCT
CCGCTAAGCGCTTCGGCGGTCACCACGAGGACGAGACATACGAGGAGTTC
TCTGCCAGATGGTGTCAAGGCCAAGGTCGAGACTCAGGAGCAGTACAAGC
AATACCTTGAGGCCCTTGAGGGTCTCCGCCAGGAGCTGGGTGTTGCTCTC
CGTGAGGAGCTCTACCCCGAGGAGGCGTAACGTAATCTCAACAACTGCTT
CGCCTACGATCTCGTTCCCTCCGTTGAGGTCCTTACCGCTGCTCTGAAGG
CTGCTCGTCGCGTCAACGACTACCCCACCGCTGTCCGGATCTTCGAGGAT
TCGAGAAGGAATTCGACGGTGTTCAGGATGTCTTCGAGCTCCAGGCCCCC
GTTGCTCTGGCTATCGCCCGTCCCAGCTTCAGCACCTCCGCTAAGCGCTT
CGGCGGTCACCACGAGGACGAGACATACGAGGAGTTCTCTGCCAGATGGT
GTCAAGGCCAAGGTCGAGACTCAGGAGCAGTACAAGCAATACCTTGAGGC
CCTTGAGGGTCTCCGCCAGGAGCTGGGTGTTGCTCTCCGTGAGGAGCTCT
ACCCCGAGGAGGCGTAACGTAATCTCAACAACTGCTTCGCCTACGATCTC
GTTCCCTCCGTTGAGGTCCTTACCGCTGCTCTGAAGGCTGCTCGTCGCGT
CAACGACTACCCCACCGCTGTCCGGATCTTCGAGGATTCGAGAAGGAATT
CGACGGTGTTCAGGATGTCTTCGAGCTCCAGGCCCCCGTTGCTCTGGCTA
TCGCCCGTCCCAGCTTCAGCACCTCCGCTAAGCGCTTCGGCGGTCACCAC
GAGGACGAGACATACGAGGAGTTCTCTGCCAGATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005743 | mitochondrial inner membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004129 | cytochrome-c oxidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926522L |
| DBxref | InterPro:IPR036545 |
| DBxref | InterPro:IPR003204 |
| DBxref | PFAM:PF02284 |
| Product | Cytochrome c oxidase subunit 6 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:1216324..1218134 - |
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