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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:1703190..1704186- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_52735-T1 ID=CAN33_52735-T1|Name=CAN33_52735-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=997bp|location=Sequence derived from alignment at NKJJ01000020.1:1703190..1704186- (Aspergillus niger FDAARGOS_311)
ATGGATAACAGCCATTATGCACTGACGGAGGACCAGCTCCGGTTCTACCA
GGAGAAGGGGTATTTGCTCATCCGAGGCTTTTTCAATGATCCTGAGACCA
AGGTCCTGCAACAATGGACTCAGGAAGTGCATGACCTTCCGCGAACCCCA
GATGCAACTTACATGCCTTATGAGGTGAGATCATAGTGTCGCCTTTCTTT
AGCAGACGGCTGGCGAGCTAATTTCCGCTGCAGGAAGTAAATGCGGAAGG
CAAAAGAGTTCTCTGCCGCACTGAGAATTATGCCAATTCTCATGCTGGCT
TCGACAGTTTTCTGCGTGGTGAACGCATCTTGAGCGTTCTCCGTCAGCTA
GCTACAGAGGAAATGATTCTTTTCAAAGAGAAAATTAACTACAAACTCGC
TGGTAGTGGTAAGAAATGTAAACCTACTGCACTTGACAGGGTACCAATTA
ATGCGACGCAGGTGGCTTCTCCCCGCATATCGACGCTAATGCATATACTC
ACGTCAAGAAAATAAAGCACCTGACAGTGCTTGCTGCTGTTGATGAGATG
ACTTCGGAAAATGGTGGGCTTGACGTGGTTGACGGCAGTCATCTCATGGA
GGTACCCCTTGGAGAAGATCGCTGCATTGAACCTACGTGGGTCAAGAGCC
AAACATGGACACCTTGCAATCTGCAACCGGGTATGTCTGTTATATTATGA
CTGCTATATTCCAGGCATTAACCATCATCTTACACAGGTGACATTCTCGT
TTTTGGCTCCTACCTTGCCCACAAAAGTGGCGCCAACACCAGCTCCAAGG
ACCGACGCGCAATTTATGCCACATACAACCGCTTGGCCGAGGGTGACCTG
CACGATCAGTACTATGAGGATCGTCGCAAGCTGTGGCCTGCCACACACAT
GCGGAAAGAGGGGGAGTCGTATGAAGAGGGCAGGATGCGGTATGGCTATG
GCTCCCCGATGCTTACGGTCGAGGGTCAACAGCCGGTACTGGCGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:1703190..1704186- >CAN33_52735-T1 ID=CAN33_52735-T1|Name=CAN33_52735-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3312bp|location=Sequence derived from alignment at NKJJ01000020.1:1703190..1704186- (Aspergillus niger FDAARGOS_311)
GTGACATTCTCGTTTTTGGCTCCTACCTTGCCCACAAAAGTGGCGCCAAC
ACCAGCTCCAAGGACCGACGCGCAATTTATGCCACATACAACCGCTTGGC
CGAGGGTGACCTGCACGATCAGTACTATGAGGATCGTCGCAAGCTGTGGC
CTGCCACACACATGCGGAAAGAGGGGGAGTCGTATGAAGAGGGCAGGATG
CGGTATGGCTATGGCTCCCCGATGCTTACGGTCGAGGGTCAACAGCCGGT
ACTGGCGTAGGTGGCTTCTCCCCGCATATCGACGCTAATGCATATACTCA
CGTCAAGAAAATAAAGCACCTGACAGTGCTTGCTGCTGTTGATGAGATGA
CTTCGGAAAATGGTGGGCTTGACGTGGTTGACGGCAGTCATCTCATGGAG
GTACCCCTTGGAGAAGATCGCTGCATTGAACCTACGTGGGTCAAGAGCCA
AACATGGACACCTTGCAATCTGCAACCGGGAAGTAAATGCGGAAGGCAAA
AGAGTTCTCTGCCGCACTGAGAATTATGCCAATTCTCATGCTGGCTTCGA
CAGTTTTCTGCGTGGTGAACGCATCTTGAGCGTTCTCCGTCAGCTAGCTA
CAGAGGAAATGATTCTTTTCAAAGAGAAAATTAACTACAAACTCGCTGGT
AGTGATGGATAACAGCCATTATGCACTGACGGAGGACCAGCTCCGGTTCT
ACCAGGAGAAGGGGTATTTGCTCATCCGAGGCTTTTTCAATGATCCTGAG
ACCAAGGTCCTGCAACAATGGACTCAGGAAGTGCATGACCTTCCGCGAAC
CCCAGATGCAACTTACATGCCTTATGAGGTGACATTCTCGTTTTTGGCTC
CTACCTTGCCCACAAAAGTGGCGCCAACACCAGCTCCAAGGACCGACGCG
CAATTTATGCCACATACAACCGCTTGGCCGAGGGTGACCTGCACGATCAG
TACTATGAGGATCGTCGCAAGCTGTGGCCTGCCACACACATGCGGAAAGA
GGGGGAGTCGTATGAAGAGGGCAGGATGCGGTATGGCTATGGCTCCCCGA
TGCTTACGGTCGAGGGTCAACAGCCGGTACTGGCGTAGGTGGCTTCTCCC
CGCATATCGACGCTAATGCATATACTCACGTCAAGAAAATAAAGCACCTG
ACAGTGCTTGCTGCTGTTGATGAGATGACTTCGGAAAATGGTGGGCTTGA
CGTGGTTGACGGCAGTCATCTCATGGAGGTACCCCTTGGAGAAGATCGCT
GCATTGAACCTACGTGGGTCAAGAGCCAAACATGGACACCTTGCAATCTG
CAACCGGGAAGTAAATGCGGAAGGCAAAAGAGTTCTCTGCCGCACTGAGA
ATTATGCCAATTCTCATGCTGGCTTCGACAGTTTTCTGCGTGGTGAACGC
ATCTTGAGCGTTCTCCGTCAGCTAGCTACAGAGGAAATGATTCTTTTCAA
AGAGAAAATTAACTACAAACTCGCTGGTAGTGATGGATAACAGCCATTAT
GCACTGACGGAGGACCAGCTCCGGTTCTACCAGGAGAAGGGGTATTTGCT
CATCCGAGGCTTTTTCAATGATCCTGAGACCAAGGTCCTGCAACAATGGA
CTCAGGAAGTGCATGACCTTCCGCGAACCCCAGATGCAACTTACATGCCT
TATGAGGTGACATTCTCGTTTTTGGCTCCTACCTTGCCCACAAAAGTGGC
GCCAACACCAGCTCCAAGGACCGACGCGCAATTTATGCCACATACAACCG
CTTGGCCGAGGGTGACCTGCACGATCAGTACTATGAGGATCGTCGCAAGC
TGTGGCCTGCCACACACATGCGGAAAGAGGGGGAGTCGTATGAAGAGGGC
AGGATGCGGTATGGCTATGGCTCCCCGATGCTTACGGTCGAGGGTCAACA
GCCGGTACTGGCGTAGGTGGCTTCTCCCCGCATATCGACGCTAATGCATA
TACTCACGTCAAGAAAATAAAGCACCTGACAGTGCTTGCTGCTGTTGATG
AGATGACTTCGGAAAATGGTGGGCTTGACGTGGTTGACGGCAGTCATCTC
ATGGAGGTACCCCTTGGAGAAGATCGCTGCATTGAACCTACGTGGGTCAA
GAGCCAAACATGGACACCTTGCAATCTGCAACCGGGAAGTAAATGCGGAA
GGCAAAAGAGTTCTCTGCCGCACTGAGAATTATGCCAATTCTCATGCTGG
CTTCGACAGTTTTCTGCGTGGTGAACGCATCTTGAGCGTTCTCCGTCAGC
TAGCTACAGAGGAAATGATTCTTTTCAAAGAGAAAATTAACTACAAACTC
GCTGGTAGTGATGGATAACAGCCATTATGCACTGACGGAGGACCAGCTCC
GGTTCTACCAGGAGAAGGGGTATTTGCTCATCCGAGGCTTTTTCAATGAT
CCTGAGACCAAGGTCCTGCAACAATGGACTCAGGAAGTGCATGACCTTCC
GCGAACCCCAGATGCAACTTACATGCCTTATGAGGTGACATTCTCGTTTT
TGGCTCCTACCTTGCCCACAAAAGTGGCGCCAACACCAGCTCCAAGGACC
GACGCGCAATTTATGCCACATACAACCGCTTGGCCGAGGGTGACCTGCAC
GATCAGTACTATGAGGATCGTCGCAAGCTGTGGCCTGCCACACACATGCG
GAAAGAGGGGGAGTCGTATGAAGAGGGCAGGATGCGGTATGGCTATGGCT
CCCCGATGCTTACGGTCGAGGGTCAACAGCCGGTACTGGCGTAGGTGGCT
TCTCCCCGCATATCGACGCTAATGCATATACTCACGTCAAGAAAATAAAG
CACCTGACAGTGCTTGCTGCTGTTGATGAGATGACTTCGGAAAATGGTGG
GCTTGACGTGGTTGACGGCAGTCATCTCATGGAGGTACCCCTTGGAGAAG
ATCGCTGCATTGAACCTACGTGGGTCAAGAGCCAAACATGGACACCTTGC
AATCTGCAACCGGGAAGTAAATGCGGAAGGCAAAAGAGTTCTCTGCCGCA
CTGAGAATTATGCCAATTCTCATGCTGGCTTCGACAGTTTTCTGCGTGGT
GAACGCATCTTGAGCGTTCTCCGTCAGCTAGCTACAGAGGAAATGATTCT
TTTCAAAGAGAAAATTAACTACAAACTCGCTGGTAGTGATGGATAACAGC
CATTATGCACTGACGGAGGACCAGCTCCGGTTCTACCAGGAGAAGGGGTA
TTTGCTCATCCGAGGCTTTTTCAATGATCCTGAGACCAAGGTCCTGCAAC
AATGGACTCAGGAAGTGCATGACCTTCCGCGAACCCCAGATGCAACTTAC
ATGCCTTATGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008775 |
| DBxref | PFAM:PF05721 |
| Product | Phytanoyl-CoA dioxygenase (PhyH) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:1703190..1704186 - |
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