You are here

Home

CAN33_53175-T1, CAN33_53175-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_53175-T1
Unique NameCAN33_53175-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1969104..1970268-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_53175-T1 ID=CAN33_53175-T1|Name=CAN33_53175-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1165bp|location=Sequence derived from alignment at NKJJ01000020.1:1969104..1970268- (Aspergillus niger FDAARGOS_311)
ATGTCATCCGCCGTTGTGCACAGCGACGACCTCATGGAGCCCACGCTCCA
GTCGGTGGTGAACCAAAAGACCTTGCGTTGGATCTTTGTTGGCGGCAAAG
GAGGTGTCGGCAAGACTACGACTTCCTGCTCTCTTGCAATTCAGCTTGCC
AAAGTTCGCAAATCCGTCCTTCTCATCTCCACCGATCCCGCACACAACCT
TAGCGATGCTTTCGGTCAGAAGTTTGGAAAGGAGGCCCGACTGGTCGATG
GATACACGAACCTGAGCGCTATGGAGATCGACCCTAACGGAAGTATTCAA
GATCTCCTGGCTAGTGGTGAAGGCCAAGGCGACGACCCTCTGTCTGGTAT
GGGCGTTGGTGGAATGATGCAGGACCTTGCGTTCAGTGTACGTCACGCAC
CGGAGCTGACCAGCAGAAAATCATTGCTCTCGTGGAAAATAGCTAATTGT
AGCAGATCCCCGGTGTTGATGAAGCTATGTCCTTTGCCGAAGTCCTGAAG
CAGGTCAAGTCGCTGTCCTACGAAGTTATTGTGTTTGACACTGCGCCGAC
CGGTCACACTCTCCGCTTCCTCCAATTCCCCACTGTCTTAGAGAAGGCTC
TCGCCAAGCTGTCGCAGCTGTCGTCTCAGTTCGGTCCCATGCTGAACTCG
ATCCTTGGTTCCCGTGGTGGTCTGCCTGGCGGTCAAAACATTGATGAATT
GTTGCAGAAGATGGAGTCGCTGAGGGAGACAATCAGCGAGGTTAACTCGC
AGTTCAAGGACGCCGATCTGACTACCTTCGTCTGTGTCTGCATTGCGGAA
TTCCTGTCCCTCTACGAAACCGAGCGCATGATCCAGGAGCTCACAAGCTA
TAACATCGATACCCATGCCATTGTGGTCAACCAGCTCCTGTTCCCCAAGC
AAAGCAGCGAGTGCGAGCAATGTAATGCACGGAGGAAGATGCAGAAGAAG
TACTTGGAGCAGATTGAAGAGTTATATGAAGACTTCAACGTGGTTAGAAT
GCCATTGCTGGTTGAGGAAGTTAGAGGCAAGGAGAAGCTTGAGAAGTAAG
TCGACGCCTAGATAACCAGTTGTGAGAGAAGCATCACGTTGGCTAACCTG
CCCACAGATTCAGCGACATGCTTGTGAACCCGTATGTTCCCCGGAGGGCA
ACTGAGGCGGATTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:1969104..1970268-

>CAN33_53175-T1 ID=CAN33_53175-T1|Name=CAN33_53175-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3105bp|location=Sequence derived from alignment at NKJJ01000020.1:1969104..1970268- (Aspergillus niger FDAARGOS_311)
ATTCAGCGACATGCTTGTGAACCCGTATGTTCCCCGGAGGGCAACTGAGG
CGGATTAGATCCCCGGTGTTGATGAAGCTATGTCCTTTGCCGAAGTCCTG
AAGCAGGTCAAGTCGCTGTCCTACGAAGTTATTGTGTTTGACACTGCGCC
GACCGGTCACACTCTCCGCTTCCTCCAATTCCCCACTGTCTTAGAGAAGG
CTCTCGCCAAGCTGTCGCAGCTGTCGTCTCAGTTCGGTCCCATGCTGAAC
TCGATCCTTGGTTCCCGTGGTGGTCTGCCTGGCGGTCAAAACATTGATGA
ATTGTTGCAGAAGATGGAGTCGCTGAGGGAGACAATCAGCGAGGTTAACT
CGCAGTTCAAGGACGCCGATCTGACTACCTTCGTCTGTGTCTGCATTGCG
GAATTCCTGTCCCTCTACGAAACCGAGCGCATGATCCAGGAGCTCACAAG
CTATAACATCGATACCCATGCCATTGTGGTCAACCAGCTCCTGTTCCCCA
AGCAAAGCAGCGAGTGCGAGCAATGTAATGCACGGAGGAAGATGCAGAAG
AAGTACTTGGAGCAGATTGAAGAGTTATATGAAGACTTCAACGTGGTTAG
AATGCCATTGCTGGTTGAGGAAGTTAGAGGCAAGGAGAAGCTTGAGAAAT
GTCATCCGCCGTTGTGCACAGCGACGACCTCATGGAGCCCACGCTCCAGT
CGGTGGTGAACCAAAAGACCTTGCGTTGGATCTTTGTTGGCGGCAAAGGA
GGTGTCGGCAAGACTACGACTTCCTGCTCTCTTGCAATTCAGCTTGCCAA
AGTTCGCAAATCCGTCCTTCTCATCTCCACCGATCCCGCACACAACCTTA
GCGATGCTTTCGGTCAGAAGTTTGGAAAGGAGGCCCGACTGGTCGATGGA
TACACGAACCTGAGCGCTATGGAGATCGACCCTAACGGAAGTATTCAAGA
TCTCCTGGCTAGTGGTGAAGGCCAAGGCGACGACCCTCTGTCTGGTATGG
GCGTTGGTGGAATGATGCAGGACCTTGCGTTCAGTATTCAGCGACATGCT
TGTGAACCCGTATGTTCCCCGGAGGGCAACTGAGGCGGATTAGATCCCCG
GTGTTGATGAAGCTATGTCCTTTGCCGAAGTCCTGAAGCAGGTCAAGTCG
CTGTCCTACGAAGTTATTGTGTTTGACACTGCGCCGACCGGTCACACTCT
CCGCTTCCTCCAATTCCCCACTGTCTTAGAGAAGGCTCTCGCCAAGCTGT
CGCAGCTGTCGTCTCAGTTCGGTCCCATGCTGAACTCGATCCTTGGTTCC
CGTGGTGGTCTGCCTGGCGGTCAAAACATTGATGAATTGTTGCAGAAGAT
GGAGTCGCTGAGGGAGACAATCAGCGAGGTTAACTCGCAGTTCAAGGACG
CCGATCTGACTACCTTCGTCTGTGTCTGCATTGCGGAATTCCTGTCCCTC
TACGAAACCGAGCGCATGATCCAGGAGCTCACAAGCTATAACATCGATAC
CCATGCCATTGTGGTCAACCAGCTCCTGTTCCCCAAGCAAAGCAGCGAGT
GCGAGCAATGTAATGCACGGAGGAAGATGCAGAAGAAGTACTTGGAGCAG
ATTGAAGAGTTATATGAAGACTTCAACGTGGTTAGAATGCCATTGCTGGT
TGAGGAAGTTAGAGGCAAGGAGAAGCTTGAGAAATGTCATCCGCCGTTGT
GCACAGCGACGACCTCATGGAGCCCACGCTCCAGTCGGTGGTGAACCAAA
AGACCTTGCGTTGGATCTTTGTTGGCGGCAAAGGAGGTGTCGGCAAGACT
ACGACTTCCTGCTCTCTTGCAATTCAGCTTGCCAAAGTTCGCAAATCCGT
CCTTCTCATCTCCACCGATCCCGCACACAACCTTAGCGATGCTTTCGGTC
AGAAGTTTGGAAAGGAGGCCCGACTGGTCGATGGATACACGAACCTGAGC
GCTATGGAGATCGACCCTAACGGAAGTATTCAAGATCTCCTGGCTAGTGG
TGAAGGCCAAGGCGACGACCCTCTGTCTGGTATGGGCGTTGGTGGAATGA
TGCAGGACCTTGCGTTCAGTATTCAGCGACATGCTTGTGAACCCGTATGT
TCCCCGGAGGGCAACTGAGGCGGATTAGATCCCCGGTGTTGATGAAGCTA
TGTCCTTTGCCGAAGTCCTGAAGCAGGTCAAGTCGCTGTCCTACGAAGTT
ATTGTGTTTGACACTGCGCCGACCGGTCACACTCTCCGCTTCCTCCAATT
CCCCACTGTCTTAGAGAAGGCTCTCGCCAAGCTGTCGCAGCTGTCGTCTC
AGTTCGGTCCCATGCTGAACTCGATCCTTGGTTCCCGTGGTGGTCTGCCT
GGCGGTCAAAACATTGATGAATTGTTGCAGAAGATGGAGTCGCTGAGGGA
GACAATCAGCGAGGTTAACTCGCAGTTCAAGGACGCCGATCTGACTACCT
TCGTCTGTGTCTGCATTGCGGAATTCCTGTCCCTCTACGAAACCGAGCGC
ATGATCCAGGAGCTCACAAGCTATAACATCGATACCCATGCCATTGTGGT
CAACCAGCTCCTGTTCCCCAAGCAAAGCAGCGAGTGCGAGCAATGTAATG
CACGGAGGAAGATGCAGAAGAAGTACTTGGAGCAGATTGAAGAGTTATAT
GAAGACTTCAACGTGGTTAGAATGCCATTGCTGGTTGAGGAAGTTAGAGG
CAAGGAGAAGCTTGAGAAATGTCATCCGCCGTTGTGCACAGCGACGACCT
CATGGAGCCCACGCTCCAGTCGGTGGTGAACCAAAAGACCTTGCGTTGGA
TCTTTGTTGGCGGCAAAGGAGGTGTCGGCAAGACTACGACTTCCTGCTCT
CTTGCAATTCAGCTTGCCAAAGTTCGCAAATCCGTCCTTCTCATCTCCAC
CGATCCCGCACACAACCTTAGCGATGCTTTCGGTCAGAAGTTTGGAAAGG
AGGCCCGACTGGTCGATGGATACACGAACCTGAGCGCTATGGAGATCGAC
CCTAACGGAAGTATTCAAGATCTCCTGGCTAGTGGTGAAGGCCAAGGCGA
CGACCCTCTGTCTGGTATGGGCGTTGGTGGAATGATGCAGGACCTTGCGT
TCAGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016887ATPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GET3CAN33_53175Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53175-T1CAN33_53175-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53175-T1.cdsCAN33_53175-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53175-T1.exon3CAN33_53175-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_53175-T1.exon2CAN33_53175-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_53175-T1.exon1CAN33_53175-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG092631UM
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR027542
DBxrefInterPro:IPR016300
DBxrefInterPro:IPR025723
DBxrefPFAM:PF01656
DBxrefPFAM:PF02374
DBxrefPFAM:PF13614
ProductGolgi to ER traffic- protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1969104..1970268 -
Powered by Drupal