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CAN33_53750-T1, CAN33_53750-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_53750-T1
Unique NameCAN33_53750-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2375810..2376574+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_53750-T1 ID=CAN33_53750-T1|Name=CAN33_53750-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=765bp|location=Sequence derived from alignment at NKJJ01000020.1:2375810..2376574+ (Aspergillus niger FDAARGOS_311)
ATGTTCGCCGGCAAGCGCCTGAGCAAGGTAAGCCATCATGCCACTCACCA
CCCCGCTCACCATCTCGACCAATGCAACTAACCCAGATTTACATACAGGA
GCTCTTAAAGGTACCCATTCCTCCCTGTTACCTGCAACATTCACCCTACC
AGATCGATCACAACCACGATCTACACTTCAATGCGCCACACCTACACAGA
CCCCTAACACACAACTAACACAATCCCCTCCACAGATGAAAGACCACCTT
CCGCCCGGGATCACAATCGTCAAGTCCGAAAACCTCGAGGAATGGCAAAT
GGACATTAAAGTCCTCGATTCCAATCCGCTTTACCAGAACGAGACCTACC
GGCTCAAATTCACCTTTAGCAACAAATACCCTATCGGTAATTTACCCCTC
ACAACCACCAGCCACATTCATTTTAACTTGTTGTACAAAGAAGAAAATGA
ACTAACAAGATTCATCTTATTCGTTTCAATAGAACCCCCGAAGTCCAATT
CATCGAATGCCCACCCACCTCCGACCACCCCCGTCCGATCCCCATCCACC
CACACATCTACAGCAACGGCATAATATGTCTCGATCTCCTCAGCTCGGCA
GGCTGGTCGCCCGTGCAGACGGTCGAGAGCGTCTGCATGAGTATTCAGAG
CATGTTGACGGCCAATTCGCGCAATGAGCGGCCTCCCGGTGATAGTGAAT
TTGTGTCGTATAATCGGAGGAGACCGAGGGATATTAATTTCCATTACGAC
GATGATAATGTATAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2375810..2376574+

>CAN33_53750-T1 ID=CAN33_53750-T1|Name=CAN33_53750-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1848bp|location=Sequence derived from alignment at NKJJ01000020.1:2375810..2376574+ (Aspergillus niger FDAARGOS_311)
ATGTTCGCCGGCAAGCGCCTGAGCAAGGAGCTCTTAAAGATGAAAGACCA
CCTTCCGCCCGGGATCACAATCGTCAAGTCCGAAAACCTCGAGGAATGGC
AAATGGACATTAAAGTCCTCGATTCCAATCCGCTTTACCAGAACGAGACC
TACCGGCTCAAATTCACCTTTAGCAACAAATACCCTATCGTCCAATTCAT
CGAATGCCCACCCACCTCCGACCACCCCCGTCCGATCCCCATCCACCCAC
ACATCTACAGCAACGGCATAATATGTCTCGATCTCCTCAGCTCGGCAGGC
TGGTCGCCCGTGCAGACGGTCGAGAGCGTCTGCATGAGTATTCAGAGCAT
GTTGACGGCCAATTCGCGCAATGAGCGGCCTCCCGGTGATAGTGAATTTG
TGTCGTATAATCGGAGGAGACCGAGGGATATTAATTTCCATTACGACGAT
GATAATGTATAGATGTTCGCCGGCAAGCGCCTGAGCAAGGAGCTCTTAAA
GATGAAAGACCACCTTCCGCCCGGGATCACAATCGTCAAGTCCGAAAACC
TCGAGGAATGGCAAATGGACATTAAAGTCCTCGATTCCAATCCGCTTTAC
CAGAACGAGACCTACCGGCTCAAATTCACCTTTAGCAACAAATACCCTAT
CGTCCAATTCATCGAATGCCCACCCACCTCCGACCACCCCCGTCCGATCC
CCATCCACCCACACATCTACAGCAACGGCATAATATGTCTCGATCTCCTC
AGCTCGGCAGGCTGGTCGCCCGTGCAGACGGTCGAGAGCGTCTGCATGAG
TATTCAGAGCATGTTGACGGCCAATTCGCGCAATGAGCGGCCTCCCGGTG
ATAGTGAATTTGTGTCGTATAATCGGAGGAGACCGAGGGATATTAATTTC
CATTACGACGATGATAATGTATAGATGTTCGCCGGCAAGCGCCTGAGCAA
GGAGCTCTTAAAGATGAAAGACCACCTTCCGCCCGGGATCACAATCGTCA
AGTCCGAAAACCTCGAGGAATGGCAAATGGACATTAAAGTCCTCGATTCC
AATCCGCTTTACCAGAACGAGACCTACCGGCTCAAATTCACCTTTAGCAA
CAAATACCCTATCGTCCAATTCATCGAATGCCCACCCACCTCCGACCACC
CCCGTCCGATCCCCATCCACCCACACATCTACAGCAACGGCATAATATGT
CTCGATCTCCTCAGCTCGGCAGGCTGGTCGCCCGTGCAGACGGTCGAGAG
CGTCTGCATGAGTATTCAGAGCATGTTGACGGCCAATTCGCGCAATGAGC
GGCCTCCCGGTGATAGTGAATTTGTGTCGTATAATCGGAGGAGACCGAGG
GATATTAATTTCCATTACGACGATGATAATGTATAGATGTTCGCCGGCAA
GCGCCTGAGCAAGGAGCTCTTAAAGATGAAAGACCACCTTCCGCCCGGGA
TCACAATCGTCAAGTCCGAAAACCTCGAGGAATGGCAAATGGACATTAAA
GTCCTCGATTCCAATCCGCTTTACCAGAACGAGACCTACCGGCTCAAATT
CACCTTTAGCAACAAATACCCTATCGTCCAATTCATCGAATGCCCACCCA
CCTCCGACCACCCCCGTCCGATCCCCATCCACCCACACATCTACAGCAAC
GGCATAATATGTCTCGATCTCCTCAGCTCGGCAGGCTGGTCGCCCGTGCA
GACGGTCGAGAGCGTCTGCATGAGTATTCAGAGCATGTTGACGGCCAATT
CGCGCAATGAGCGGCCTCCCGGTGATAGTGAATTTGTGTCGTATAATCGG
AGGAGACCGAGGGATATTAATTTCCATTACGACGATGATAATGTATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_53750CAN33_53750Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53750-T1.exon1CAN33_53750-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_53750-T1.exon2CAN33_53750-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_53750-T1.exon3CAN33_53750-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_53750-T1.exon4CAN33_53750-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53750-T1.cdsCAN33_53750-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53750-T1CAN33_53750-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000608
DBxrefInterPro:IPR016135
DBxrefPFAM:PF00179
DBxrefPFAM:PF14461
ProductUbiquitin-conjugating enzyme family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2375810..2376574 +
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