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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:2566446..2567941- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_54025-T1 ID=CAN33_54025-T1|Name=CAN33_54025-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1496bp|location=Sequence derived from alignment at NKJJ01000020.1:2566446..2567941- (Aspergillus niger FDAARGOS_311)
ATGTCTTCTGCTCCTGACGGGCAACCAATGCTGCCTCTTCCTGGAGCCCC
GTCTTCTTCATGGTCCCGATTTCGTGAGAGATTCGGTGCACTATTTCATG
GCGCTGACCCCAGAGTCTGTGTTGCATTCTGGCTACTTGGTAAGCCGTTG
GCCGTCTTGTAGACACCGCGAACTGATAAGAACTACTCGTGGCTCACTGA
CCGGCATGCGTGACTCGCAACAGGATTGATCAACAATGTCCTCTATGTTA
TCATTTTGTCCGCAGCCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGC
GTCGTTCTTCTCGCAGACGTCATTCCCTCATTCGGAACCAAGCTGATAGC
ACCCTACTTTATTCATTTGGTTCCATATCCCGCTCGAGTATTGTTCTGTG
TGCTATGTTCAGCCGTGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTAT
ACAGATGGCGGTTCAATTTCCACCAAAATCGCGGGCATTATTCTGGCGAG
CTTGTCGAGCGGAGGAGGCGAACTGAGCTTCCTAGCACTGACGCACTTCT
ACGGCCCGTTCAGTCTGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGG
CTGGTCGGGGCTGGTGCGTACGCCGTCGCAACTACCTCTATGGGGCTCAG
TGTCAGGTCGACACTCCTAGCAGCTGCCTGCCTGCCAGCAATCATGGTTG
TGAGCTTCTTCGCCATTCTGCCAAGAGCTCCCATACGGACATTGGCCGCT
GCACCTGTTGAGTATCGTGCAATTGACCAGGAAGATCGGGATGACCTTCT
GGATGAGCGGCACGGTCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACA
AGAGGAGCGACGCGAGTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAAC
CTGCAGCGAGCTAGGGGACTTTTCTTTCCCTTGTAAGTGCACGCTAGTAT
CATCAAGCAATAATTGGCATGCTTACATTTCCGCGCAGCATGCTCCCCCT
TCTGCTAGTCTATGTGGCCGAATACACAATCAACCAAGGGGTTTCTCCGA
CCCTGCTGTTTCCACTTAAAGATTCGCCGTTTGAACATTATCGTGCATTT
TATCCCGCGTACAATGCGATCTATCAGGTTGGTGTTTTCATCTCGCGATC
GTCCACCCCTTTCTTTCGGATTCACGATCTTTACCTTCCGTCACTGCTGC
AAATCATCAATTTGGTCGTATTGACATTGCACGCCTTGTTTGACTTCATC
CCGAGCGTGTACATAATATTTATAGTCATCTTCTGGGAAGGGCTATTAGG
GGGGCTGGTTTATGTCAATACATTCGCCGAAATCGGGGACCGGGTGCCGA
AGGAAGACCGAGAATTCTCGCTCGGAGCGACGACTGTCAGCGATTCTGCC
GGAATTTGTATAGCGGGCTTTCTGGGAATGGCGTTTGAGGTCTGGTTGTG
TGATTGGCAGGTCGCCCACGGTCGGGATTATTGCCGGAAACTATGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:2566446..2567941- >CAN33_54025-T1 ID=CAN33_54025-T1|Name=CAN33_54025-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4068bp|location=Sequence derived from alignment at NKJJ01000020.1:2566446..2567941- (Aspergillus niger FDAARGOS_311)
CATGCTCCCCCTTCTGCTAGTCTATGTGGCCGAATACACAATCAACCAAG
GGGTTTCTCCGACCCTGCTGTTTCCACTTAAAGATTCGCCGTTTGAACAT
TATCGTGCATTTTATCCCGCGTACAATGCGATCTATCAGGTTGGTGTTTT
CATCTCGCGATCGTCCACCCCTTTCTTTCGGATTCACGATCTTTACCTTC
CGTCACTGCTGCAAATCATCAATTTGGTCGTATTGACATTGCACGCCTTG
TTTGACTTCATCCCGAGCGTGTACATAATATTTATAGTCATCTTCTGGGA
AGGGCTATTAGGGGGGCTGGTTTATGTCAATACATTCGCCGAAATCGGGG
ACCGGGTGCCGAAGGAAGACCGAGAATTCTCGCTCGGAGCGACGACTGTC
AGCGATTCTGCCGGAATTTGTATAGCGGGCTTTCTGGGAATGGCGTTTGA
GGTCTGGTTGTGTGATTGGCAGGTCGCCCACGGTCGGGATTATTGCCGGA
AACTATGAGATTGATCAACAATGTCCTCTATGTTATCATTTTGTCCGCAG
CCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGCGTCGTTCTTCTCGCA
GACGTCATTCCCTCATTCGGAACCAAGCTGATAGCACCCTACTTTATTCA
TTTGGTTCCATATCCCGCTCGAGTATTGTTCTGTGTGCTATGTTCAGCCG
TGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTATACAGATGGCGGTTCA
ATTTCCACCAAAATCGCGGGCATTATTCTGGCGAGCTTGTCGAGCGGAGG
AGGCGAACTGAGCTTCCTAGCACTGACGCACTTCTACGGCCCGTTCAGTC
TGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGGCTGGTCGGGGCTGGT
GCGTACGCCGTCGCAACTACCTCTATGGGGCTCAGTGTCAGGTCGACACT
CCTAGCAGCTGCCTGCCTGCCAGCAATCATGGTTGTGAGCTTCTTCGCCA
TTCTGCCAAGAGCTCCCATACGGACATTGGCCGCTGCACCTGTTGAGTAT
CGTGCAATTGACCAGGAAGATCGGGATGACCTTCTGGATGAGCGGCACGG
TCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACAAGAGGAGCGACGCGA
GTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAACCTGCAGCGAGCTAGG
GGACTTTTCTTTCCCTTATGTCTTCTGCTCCTGACGGGCAACCAATGCTG
CCTCTTCCTGGAGCCCCGTCTTCTTCATGGTCCCGATTTCGTGAGAGATT
CGGTGCACTATTTCATGGCGCTGACCCCAGAGTCTGTGTTGCATTCTGGC
TACTTGCATGCTCCCCCTTCTGCTAGTCTATGTGGCCGAATACACAATCA
ACCAAGGGGTTTCTCCGACCCTGCTGTTTCCACTTAAAGATTCGCCGTTT
GAACATTATCGTGCATTTTATCCCGCGTACAATGCGATCTATCAGGTTGG
TGTTTTCATCTCGCGATCGTCCACCCCTTTCTTTCGGATTCACGATCTTT
ACCTTCCGTCACTGCTGCAAATCATCAATTTGGTCGTATTGACATTGCAC
GCCTTGTTTGACTTCATCCCGAGCGTGTACATAATATTTATAGTCATCTT
CTGGGAAGGGCTATTAGGGGGGCTGGTTTATGTCAATACATTCGCCGAAA
TCGGGGACCGGGTGCCGAAGGAAGACCGAGAATTCTCGCTCGGAGCGACG
ACTGTCAGCGATTCTGCCGGAATTTGTATAGCGGGCTTTCTGGGAATGGC
GTTTGAGGTCTGGTTGTGTGATTGGCAGGTCGCCCACGGTCGGGATTATT
GCCGGAAACTATGAGATTGATCAACAATGTCCTCTATGTTATCATTTTGT
CCGCAGCCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGCGTCGTTCTT
CTCGCAGACGTCATTCCCTCATTCGGAACCAAGCTGATAGCACCCTACTT
TATTCATTTGGTTCCATATCCCGCTCGAGTATTGTTCTGTGTGCTATGTT
CAGCCGTGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTATACAGATGGC
GGTTCAATTTCCACCAAAATCGCGGGCATTATTCTGGCGAGCTTGTCGAG
CGGAGGAGGCGAACTGAGCTTCCTAGCACTGACGCACTTCTACGGCCCGT
TCAGTCTGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGGCTGGTCGGG
GCTGGTGCGTACGCCGTCGCAACTACCTCTATGGGGCTCAGTGTCAGGTC
GACACTCCTAGCAGCTGCCTGCCTGCCAGCAATCATGGTTGTGAGCTTCT
TCGCCATTCTGCCAAGAGCTCCCATACGGACATTGGCCGCTGCACCTGTT
GAGTATCGTGCAATTGACCAGGAAGATCGGGATGACCTTCTGGATGAGCG
GCACGGTCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACAAGAGGAGCG
ACGCGAGTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAACCTGCAGCGA
GCTAGGGGACTTTTCTTTCCCTTATGTCTTCTGCTCCTGACGGGCAACCA
ATGCTGCCTCTTCCTGGAGCCCCGTCTTCTTCATGGTCCCGATTTCGTGA
GAGATTCGGTGCACTATTTCATGGCGCTGACCCCAGAGTCTGTGTTGCAT
TCTGGCTACTTGCATGCTCCCCCTTCTGCTAGTCTATGTGGCCGAATACA
CAATCAACCAAGGGGTTTCTCCGACCCTGCTGTTTCCACTTAAAGATTCG
CCGTTTGAACATTATCGTGCATTTTATCCCGCGTACAATGCGATCTATCA
GGTTGGTGTTTTCATCTCGCGATCGTCCACCCCTTTCTTTCGGATTCACG
ATCTTTACCTTCCGTCACTGCTGCAAATCATCAATTTGGTCGTATTGACA
TTGCACGCCTTGTTTGACTTCATCCCGAGCGTGTACATAATATTTATAGT
CATCTTCTGGGAAGGGCTATTAGGGGGGCTGGTTTATGTCAATACATTCG
CCGAAATCGGGGACCGGGTGCCGAAGGAAGACCGAGAATTCTCGCTCGGA
GCGACGACTGTCAGCGATTCTGCCGGAATTTGTATAGCGGGCTTTCTGGG
AATGGCGTTTGAGGTCTGGTTGTGTGATTGGCAGGTCGCCCACGGTCGGG
ATTATTGCCGGAAACTATGAGATTGATCAACAATGTCCTCTATGTTATCA
TTTTGTCCGCAGCCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGCGTC
GTTCTTCTCGCAGACGTCATTCCCTCATTCGGAACCAAGCTGATAGCACC
CTACTTTATTCATTTGGTTCCATATCCCGCTCGAGTATTGTTCTGTGTGC
TATGTTCAGCCGTGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTATACA
GATGGCGGTTCAATTTCCACCAAAATCGCGGGCATTATTCTGGCGAGCTT
GTCGAGCGGAGGAGGCGAACTGAGCTTCCTAGCACTGACGCACTTCTACG
GCCCGTTCAGTCTGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGGCTG
GTCGGGGCTGGTGCGTACGCCGTCGCAACTACCTCTATGGGGCTCAGTGT
CAGGTCGACACTCCTAGCAGCTGCCTGCCTGCCAGCAATCATGGTTGTGA
GCTTCTTCGCCATTCTGCCAAGAGCTCCCATACGGACATTGGCCGCTGCA
CCTGTTGAGTATCGTGCAATTGACCAGGAAGATCGGGATGACCTTCTGGA
TGAGCGGCACGGTCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACAAGA
GGAGCGACGCGAGTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAACCTG
CAGCGAGCTAGGGGACTTTTCTTTCCCTTATGTCTTCTGCTCCTGACGGG
CAACCAATGCTGCCTCTTCCTGGAGCCCCGTCTTCTTCATGGTCCCGATT
TCGTGAGAGATTCGGTGCACTATTTCATGGCGCTGACCCCAGAGTCTGTG
TTGCATTCTGGCTACTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263C1V |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR018460 |
| DBxref | InterPro:IPR003492 |
| DBxref | PFAM:PF02487 |
| Product | battenin CLN3 protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:2566446..2567941 - |
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