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CAN33_54340-T1, CAN33_54340-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_54340-T1
Unique NameCAN33_54340-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2763449..2764285-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_54340-T1 ID=CAN33_54340-T1|Name=CAN33_54340-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=837bp|location=Sequence derived from alignment at NKJJ01000020.1:2763449..2764285- (Aspergillus niger FDAARGOS_311)
ATGCAATGGCTACCTGCCTTTCCACATACACCGACCTTCTGCTTTATGCC
CGCCTCTGACATAAATATGGAACGCCTTCCAATGAATGAGAACCCCGCCG
GTGCCCACCATGGCAATGCGCCGCAGGGCTTTCCCCCGCAGAACAACACG
CTCGGACCCATGTCGCAAGGTCCCCCGCAATTACCGCCGCAGATGTTCAC
CACCGCTGCTCAGCTGTTGGATTTGACAGATAGTGCGTTATACCTGTTCA
CTTGGCCCCCATGGGCTTATCTCACAAATGGAGACGGGCGCAACCTGACA
GTGGTTTCCAGAAAAGCTAGTTCTAGTCCTTCGAGACGGGCGGAAGTTGA
TCGGAGTTTTGAGAAGCTGGGATCAGTTCGGTATGCGCCGCATGATAGAT
GAATACCGGTTGATGATATATATCTGACTGTGCGACCCTTGCTATGTGAC
TGCTGCAGCAAACCTTGTCCTTCAGGATACCATTGAACGTCTATATGCCG
GCAACCTCTACGCCGATATCCCGCGAGGTATATTTCTCGTCCGGGGTGAG
AATGTCTTGCTTCTGGGTGAAATCGTACGCAAACCTTCCATGCATCTTCT
TCGCTATTCATGTTTAGGGCGGGGAGTTGGCTAATTGGTGTGTCTTGCTT
CTCCGGGTTACAGGATCTCGACAAAGAAGATGACATTCCCCCTCATATCC
AGCGCGCGTCGTTCCAGGAAGTGTTTGAGCTGAAGAAGAAGGAAGACGGG
GCTCGAAAAGTTGGCGACAAGAAGCGCCATGGAAAGCTACAGACGCTGGG
CTTTGAGCCGGAGCATAGCGGAGAGATACTGTTTTAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2763449..2764285-

>CAN33_54340-T1 ID=CAN33_54340-T1|Name=CAN33_54340-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2364bp|location=Sequence derived from alignment at NKJJ01000020.1:2763449..2764285- (Aspergillus niger FDAARGOS_311)
GATCTCGACAAAGAAGATGACATTCCCCCTCATATCCAGCGCGCGTCGTT
CCAGGAAGTGTTTGAGCTGAAGAAGAAGGAAGACGGGGCTCGAAAAGTTG
GCGACAAGAAGCGCCATGGAAAGCTACAGACGCTGGGCTTTGAGCCGGAG
CATAGCGGAGAGATACTGTTTTAGCAAACCTTGTCCTTCAGGATACCATT
GAACGTCTATATGCCGGCAACCTCTACGCCGATATCCCGCGAGGTATATT
TCTCGTCCGGGGTGAGAATGTCTTGCTTCTGGGTGAAATCAAAAGCTAGT
TCTAGTCCTTCGAGACGGGCGGAAGTTGATCGGAGTTTTGAGAAGCTGGG
ATCAGTTCGATGCAATGGCTACCTGCCTTTCCACATACACCGACCTTCTG
CTTTATGCCCGCCTCTGACATAAATATGGAACGCCTTCCAATGAATGAGA
ACCCCGCCGGTGCCCACCATGGCAATGCGCCGCAGGGCTTTCCCCCGCAG
AACAACACGCTCGGACCCATGTCGCAAGGTCCCCCGCAATTACCGCCGCA
GATGTTCACCACCGCTGCTCAGCTGTTGGATTTGACAGATAGATCTCGAC
AAAGAAGATGACATTCCCCCTCATATCCAGCGCGCGTCGTTCCAGGAAGT
GTTTGAGCTGAAGAAGAAGGAAGACGGGGCTCGAAAAGTTGGCGACAAGA
AGCGCCATGGAAAGCTACAGACGCTGGGCTTTGAGCCGGAGCATAGCGGA
GAGATACTGTTTTAGCAAACCTTGTCCTTCAGGATACCATTGAACGTCTA
TATGCCGGCAACCTCTACGCCGATATCCCGCGAGGTATATTTCTCGTCCG
GGGTGAGAATGTCTTGCTTCTGGGTGAAATCAAAAGCTAGTTCTAGTCCT
TCGAGACGGGCGGAAGTTGATCGGAGTTTTGAGAAGCTGGGATCAGTTCG
ATGCAATGGCTACCTGCCTTTCCACATACACCGACCTTCTGCTTTATGCC
CGCCTCTGACATAAATATGGAACGCCTTCCAATGAATGAGAACCCCGCCG
GTGCCCACCATGGCAATGCGCCGCAGGGCTTTCCCCCGCAGAACAACACG
CTCGGACCCATGTCGCAAGGTCCCCCGCAATTACCGCCGCAGATGTTCAC
CACCGCTGCTCAGCTGTTGGATTTGACAGATAGATCTCGACAAAGAAGAT
GACATTCCCCCTCATATCCAGCGCGCGTCGTTCCAGGAAGTGTTTGAGCT
GAAGAAGAAGGAAGACGGGGCTCGAAAAGTTGGCGACAAGAAGCGCCATG
GAAAGCTACAGACGCTGGGCTTTGAGCCGGAGCATAGCGGAGAGATACTG
TTTTAGCAAACCTTGTCCTTCAGGATACCATTGAACGTCTATATGCCGGC
AACCTCTACGCCGATATCCCGCGAGGTATATTTCTCGTCCGGGGTGAGAA
TGTCTTGCTTCTGGGTGAAATCAAAAGCTAGTTCTAGTCCTTCGAGACGG
GCGGAAGTTGATCGGAGTTTTGAGAAGCTGGGATCAGTTCGATGCAATGG
CTACCTGCCTTTCCACATACACCGACCTTCTGCTTTATGCCCGCCTCTGA
CATAAATATGGAACGCCTTCCAATGAATGAGAACCCCGCCGGTGCCCACC
ATGGCAATGCGCCGCAGGGCTTTCCCCCGCAGAACAACACGCTCGGACCC
ATGTCGCAAGGTCCCCCGCAATTACCGCCGCAGATGTTCACCACCGCTGC
TCAGCTGTTGGATTTGACAGATAGATCTCGACAAAGAAGATGACATTCCC
CCTCATATCCAGCGCGCGTCGTTCCAGGAAGTGTTTGAGCTGAAGAAGAA
GGAAGACGGGGCTCGAAAAGTTGGCGACAAGAAGCGCCATGGAAAGCTAC
AGACGCTGGGCTTTGAGCCGGAGCATAGCGGAGAGATACTGTTTTAGCAA
ACCTTGTCCTTCAGGATACCATTGAACGTCTATATGCCGGCAACCTCTAC
GCCGATATCCCGCGAGGTATATTTCTCGTCCGGGGTGAGAATGTCTTGCT
TCTGGGTGAAATCAAAAGCTAGTTCTAGTCCTTCGAGACGGGCGGAAGTT
GATCGGAGTTTTGAGAAGCTGGGATCAGTTCGATGCAATGGCTACCTGCC
TTTCCACATACACCGACCTTCTGCTTTATGCCCGCCTCTGACATAAATAT
GGAACGCCTTCCAATGAATGAGAACCCCGCCGGTGCCCACCATGGCAATG
CGCCGCAGGGCTTTCCCCCGCAGAACAACACGCTCGGACCCATGTCGCAA
GGTCCCCCGCAATTACCGCCGCAGATGTTCACCACCGCTGCTCAGCTGTT
GGATTTGACAGATA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000956nuclear-transcribed mRNA catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_54340CAN33_54340Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54340-T1CAN33_54340-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54340-T1.cdsCAN33_54340-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54340-T1.exon4CAN33_54340-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_54340-T1.exon3CAN33_54340-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_54340-T1.exon2CAN33_54340-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_54340-T1.exon1CAN33_54340-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR034104
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
ProductLSM domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2763449..2764285 -
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