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CAN33_43695-T1, CAN33_43695-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_43695-T1
Unique NameCAN33_43695-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:897087..898212-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_43695-T1 ID=CAN33_43695-T1|Name=CAN33_43695-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1126bp|location=Sequence derived from alignment at NKJJ01000022.1:897087..898212- (Aspergillus niger FDAARGOS_311)
ATGTCCGCCATCGAGCCAGTCGTGCGTACCGCCCCATCCCGAAACTATCA
TCCACATACAATCTCCTTGAAATTGAATACACATGTGTCAAATGAGGGCG
TCACGGTCCTGGAGTCGGAAATTCATATACCAAAGTACATTTGTCGCTGA
CTTGAATTGTTGGGTTTTCGCAGGTCGTCATTGACGGCAAGGGACACCTC
TTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAACGGTCAGAA
GATCGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGAGTTCTTCC
GTGCGAAGCGTATGTTCTATCCGACCCGGTTTCTTTCGATTTCATTTTGC
AATATGGATTTTCTTTGGGATGAATGGGAGTGCGACGGTTTTCGACATAT
GGAGGAGGACATCGGCAATTGATTGGAATATTTATGGAGGAACAAGCAAC
ACATGTGTGCTGGTGGACAACGGGCTGACCTGGATTTCGCGATATAGTCA
AGTACCACGCCTACCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGGA
GGTGAGACTACCCGATGACTTTCCCCCTTCGATGGGGAAAGACGACACTT
ATCTCTTTTGCGGGACTCCGTGCTGAATCGCTACAGGTCCCTTCCACTTC
CGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCCCCA
CAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCGAGG
GTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAGGCT
CTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGGTCG
TCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGGTACG
TTTATGCTGAAGTGGAGAGGATAAAATGGGAGATGTTGGAATATTGGGTG
CAGAAGGCTAACGGATTCGTTTTTTCTACTCGTACAGACTTGAGGAGCGC
AGAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCCG
CCAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAGA
GCCAGCTCGCTCAGTACGGATACTAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:897087..898212-

>CAN33_43695-T1 ID=CAN33_43695-T1|Name=CAN33_43695-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3465bp|location=Sequence derived from alignment at NKJJ01000022.1:897087..898212- (Aspergillus niger FDAARGOS_311)
ACTTGAGGAGCGCAGAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGA
AGGCCGCTCGCCGCCAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAAC
GAGCAGACCAAGAGCCAGCTCGCTCAGTACGGATACTAGGTCCCTTCCAC
TTCCGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCC
CCACAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCG
AGGGTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAG
GCTCTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGG
TCGTCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGTC
AAGTACCACGCCTACCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGG
AGGTCGTCATTGACGGCAAGGGACACCTCTTGGGTCGCCTGGCCAGCACT
GTTGCTAAGCAGCTGCTCAACGGTCAGAAGATCGTCGTCGTGAGATGTGA
AGCCCTCAACATCTCCGGCGAGTTCTTCCGTGCGAAGCATGTCCGCCATC
GAGCCAGTCGTGCGTACCGCCCCATCCCGAAACTATCATCCACATACAAT
CTCCTTGAAATTGAATACACATGTGTCAAATGAGGGCGTCACGACTTGAG
GAGCGCAGAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGAAGGCCGC
TCGCCGCCAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGA
CCAAGAGCCAGCTCGCTCAGTACGGATACTAGGTCCCTTCCACTTCCGTG
CCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCCCCACAAG
ACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCGAGGGTGT
TCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAGGCTCTGC
GTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGGTCGTCTC
AGCCACGAGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGTCAAGTACC
ACGCCTACCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGGAGGTCGT
CATTGACGGCAAGGGACACCTCTTGGGTCGCCTGGCCAGCACTGTTGCTA
AGCAGCTGCTCAACGGTCAGAAGATCGTCGTCGTGAGATGTGAAGCCCTC
AACATCTCCGGCGAGTTCTTCCGTGCGAAGCATGTCCGCCATCGAGCCAG
TCGTGCGTACCGCCCCATCCCGAAACTATCATCCACATACAATCTCCTTG
AAATTGAATACACATGTGTCAAATGAGGGCGTCACGACTTGAGGAGCGCA
GAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCCGC
CAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAGAG
CCAGCTCGCTCAGTACGGATACTAGGTCCCTTCCACTTCCGTGCCCCCTC
CCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCCCCACAAGACCGCCC
GTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCGAGGGTGTTCCTCCC
CCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAGGCTCTGCGTGTTCT
CCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGGTCGTCTCAGCCACG
AGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGTCAAGTACCACGCCTA
CCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGGAGGTCGTCATTGAC
GGCAAGGGACACCTCTTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCT
GCTCAACGGTCAGAAGATCGTCGTCGTGAGATGTGAAGCCCTCAACATCT
CCGGCGAGTTCTTCCGTGCGAAGCATGTCCGCCATCGAGCCAGTCGTGCG
TACCGCCCCATCCCGAAACTATCATCCACATACAATCTCCTTGAAATTGA
ATACACATGTGTCAAATGAGGGCGTCACGACTTGAGGAGCGCAGAAAGGT
TAAGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCCGCCAACTCG
TCCACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAGAGCCAGCTC
GCTCAGTACGGATACTAGGTCCCTTCCACTTCCGTGCCCCCTCCCGCATC
TTCTACAAGGCTGTCCGCGGCATGATCCCCCACAAGACCGCCCGTGGTGC
CGCCGCTATGGAGCGCCTGAAGGTTTTCGAGGGTGTTCCTCCCCCCTACG
ACAAGAAGAAGCGCGTTGTCGTTCCCCAGGCTCTGCGTGTTCTCCGCCTG
CGCCCCGGCCGCAAGTACTGCACCGTTGGTCGTCTCAGCCACGAGGTTGG
CTGGAAGTACCAGGACGTTGTTGCCAGTCAAGTACCACGCCTACCTTCGC
AAGATGACTCGTTTCAACCCCACCCGCGGAGGTCGTCATTGACGGCAAGG
GACACCTCTTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAAC
GGTCAGAAGATCGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGA
GTTCTTCCGTGCGAAGCATGTCCGCCATCGAGCCAGTCGTGCGTACCGCC
CCATCCCGAAACTATCATCCACATACAATCTCCTTGAAATTGAATACACA
TGTGTCAAATGAGGGCGTCACGACTTGAGGAGCGCAGAAAGGTTAAGAGC
AGTGCATACTACGAGCGCAAGAAGGCCGCTCGCCGCCAACTCGTCCACGC
CCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAGAGCCAGCTCGCTCAGT
ACGGATACTAGGTCCCTTCCACTTCCGTGCCCCCTCCCGCATCTTCTACA
AGGCTGTCCGCGGCATGATCCCCCACAAGACCGCCCGTGGTGCCGCCGCT
ATGGAGCGCCTGAAGGTTTTCGAGGGTGTTCCTCCCCCCTACGACAAGAA
GAAGCGCGTTGTCGTTCCCCAGGCTCTGCGTGTTCTCCGCCTGCGCCCCG
GCCGCAAGTACTGCACCGTTGGTCGTCTCAGCCACGAGGTTGGCTGGAAG
TACCAGGACGTTGTTGCCAGTCAAGTACCACGCCTACCTTCGCAAGATGA
CTCGTTTCAACCCCACCCGCGGAGGTCGTCATTGACGGCAAGGGACACCT
CTTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAACGGTCAGA
AGATCGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGAGTTCTTC
CGTGCGAAGCATGTCCGCCATCGAGCCAGTCGTGCGTACCGCCCCATCCC
GAAACTATCATCCACATACAATCTCCTTGAAATTGAATACACATGTGTCA
AATGAGGGCGTCACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRP46CAN33_43695Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43695-T1CAN33_43695-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43695-T1.cdsCAN33_43695-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43695-T1.exon5CAN33_43695-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_43695-T1.exon4CAN33_43695-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_43695-T1.exon3CAN33_43695-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_43695-T1.exon2CAN33_43695-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_43695-T1.exon1CAN33_43695-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR023563
DBxrefInterPro:IPR005755
DBxrefInterPro:IPR036899
DBxrefInterPro:IPR005822
DBxrefPFAM:PF00572
Product60S ribosomal protein L16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:897087..898212 -
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