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CAN33_44805-T1, CAN33_44805-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_44805-T1
Unique NameCAN33_44805-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1579635..1580914-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_44805-T1 ID=CAN33_44805-T1|Name=CAN33_44805-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1280bp|location=Sequence derived from alignment at NKJJ01000022.1:1579635..1580914- (Aspergillus niger FDAARGOS_311)
ATGTGCGTCAGCCCTTCCATTCGCATGCAGTACCGTACTGCTAGAGACAC
ATGGTTTATTGACTCTATAACTCAAGCCTTTGCTAGCGTTCAGTCCGATA
TCTTCAAGCCCACTAAGTATGGCGGCAAATACACCGTCACTCTTATCCCA
GGTACCTACATTCGTCTCTTTCACAGCTTGATCATTTTGCTGATGCTTCG
GTGATTCGCTTTCTTAAAGGTGACGGAATCGGAGCCGAGGTTGCTGAATC
GGTCAAGACTATCTTCAAGGCCGACAACGTTCCCATCGAGTGGGAGCAGG
TAGATGTTAGCGGTGTTGACACCGGTAACAAACACTCAGAGGAGCTTTTC
AAGGAGTCCATTGCTTCTCTGCGCCGTAACAAGCTGGGTCTCAAGGGTAT
CCTCTTCACCCCGGTTGAGCGCTCCGGCCACCAGTCGTTCAACGTTGCTC
TCCGTCAGGAGCTGGATATTTTCGCCTCTATCGTCCTCATCAAGAACATT
CCCGGCTACAAGACCCGTCACGAGAATGTTGATCTTTGCATTATCCGTGA
GAACACCGAGGGTGAATACTCTGGTCTCGAACACCAGTCCGTGCAGGGGG
TTGTTGAGTCCCTGAAGATTATCACTCGCGCCAAATCTGAGCGCATTGCC
AAGTTTGCCTTTGGTTTCGCTCTTGCCAACAACCGCAAGAAGGTTACTTG
CATCCACAAGGCCAACATCATGAAGCTTGCGGATGGTCTTTTCCGTAGCA
CCTTCCACAAGGTCGCCGAGAACTACCCGACTTTGGAGGTTAACGACATG
ATTGTCGACAACGCCTCCATGCAGGCTGTTTCCCGGCCCCAGCAGTTCGA
CGTTATGGTTATGCCCAACCTTTACGGTGGCATTCTCTCCAACATTGGTT
CTGCTCTTGTGGGTGGACCTGGTGTTGTCCCTGGTTGCAACATGGGCCGC
GACGTTGCTGTGTTCGAGCCAGGCTGCCGTCACGTTGGCCTTGACATCAA
GGGCAAGGACCAGGCTAACCCTAGCGCTATGATCCTTTCTGGCTCTATGC
TTCTACGCCACCTGGGATTGGACGACCATGCCAACCGCATCTCCAAGGCC
GTCTATGATGTGATCGGTGAGGGGTGAGTTTCAGACTTTTGTTTCAACCT
TCCAGCTTGATTCAGAGCTGTCGCTAATGCGAAATTCTCTAGTAAAACGA
GGACCCGCGATATGGGTGGACAGGCTACCACCCACGAGTTCACCAGGGCA
GTCTTGGATAAGATGGAGGCTGCTCTGTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1579635..1580914-

>CAN33_44805-T1 ID=CAN33_44805-T1|Name=CAN33_44805-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3429bp|location=Sequence derived from alignment at NKJJ01000022.1:1579635..1580914- (Aspergillus niger FDAARGOS_311)
TAAAACGAGGACCCGCGATATGGGTGGACAGGCTACCACCCACGAGTTCA
CCAGGGCAGTCTTGGATAAGATGGAGGCTGCTCTGTAAGTGACGGAATCG
GAGCCGAGGTTGCTGAATCGGTCAAGACTATCTTCAAGGCCGACAACGTT
CCCATCGAGTGGGAGCAGGTAGATGTTAGCGGTGTTGACACCGGTAACAA
ACACTCAGAGGAGCTTTTCAAGGAGTCCATTGCTTCTCTGCGCCGTAACA
AGCTGGGTCTCAAGGGTATCCTCTTCACCCCGGTTGAGCGCTCCGGCCAC
CAGTCGTTCAACGTTGCTCTCCGTCAGGAGCTGGATATTTTCGCCTCTAT
CGTCCTCATCAAGAACATTCCCGGCTACAAGACCCGTCACGAGAATGTTG
ATCTTTGCATTATCCGTGAGAACACCGAGGGTGAATACTCTGGTCTCGAA
CACCAGTCCGTGCAGGGGGTTGTTGAGTCCCTGAAGATTATCACTCGCGC
CAAATCTGAGCGCATTGCCAAGTTTGCCTTTGGTTTCGCTCTTGCCAACA
ACCGCAAGAAGGTTACTTGCATCCACAAGGCCAACATCATGAAGCTTGCG
GATGGTCTTTTCCGTAGCACCTTCCACAAGGTCGCCGAGAACTACCCGAC
TTTGGAGGTTAACGACATGATTGTCGACAACGCCTCCATGCAGGCTGTTT
CCCGGCCCCAGCAGTTCGACGTTATGGTTATGCCCAACCTTTACGGTGGC
ATTCTCTCCAACATTGGTTCTGCTCTTGTGGGTGGACCTGGTGTTGTCCC
TGGTTGCAACATGGGCCGCGACGTTGCTGTGTTCGAGCCAGGCTGCCGTC
ACGTTGGCCTTGACATCAAGGGCAAGGACCAGGCTAACCCTAGCGCTATG
ATCCTTTCTGGCTCTATGCTTCTACGCCACCTGGGATTGGACGACCATGC
CAACCGCATCTCCAAGGCCGTCTATGATGTGATCGGTGAGGGATGTGCGT
CAGCCCTTCCATTCGCATGCAGTACCGTACTGCTAGAGACACATGGTTTA
TTGACTCTATAACTCAAGCCTTTGCTAGCGTTCAGTCCGATATCTTCAAG
CCCACTAAGTATGGCGGCAAATACACCGTCACTCTTATCCCAGTAAAACG
AGGACCCGCGATATGGGTGGACAGGCTACCACCCACGAGTTCACCAGGGC
AGTCTTGGATAAGATGGAGGCTGCTCTGTAAGTGACGGAATCGGAGCCGA
GGTTGCTGAATCGGTCAAGACTATCTTCAAGGCCGACAACGTTCCCATCG
AGTGGGAGCAGGTAGATGTTAGCGGTGTTGACACCGGTAACAAACACTCA
GAGGAGCTTTTCAAGGAGTCCATTGCTTCTCTGCGCCGTAACAAGCTGGG
TCTCAAGGGTATCCTCTTCACCCCGGTTGAGCGCTCCGGCCACCAGTCGT
TCAACGTTGCTCTCCGTCAGGAGCTGGATATTTTCGCCTCTATCGTCCTC
ATCAAGAACATTCCCGGCTACAAGACCCGTCACGAGAATGTTGATCTTTG
CATTATCCGTGAGAACACCGAGGGTGAATACTCTGGTCTCGAACACCAGT
CCGTGCAGGGGGTTGTTGAGTCCCTGAAGATTATCACTCGCGCCAAATCT
GAGCGCATTGCCAAGTTTGCCTTTGGTTTCGCTCTTGCCAACAACCGCAA
GAAGGTTACTTGCATCCACAAGGCCAACATCATGAAGCTTGCGGATGGTC
TTTTCCGTAGCACCTTCCACAAGGTCGCCGAGAACTACCCGACTTTGGAG
GTTAACGACATGATTGTCGACAACGCCTCCATGCAGGCTGTTTCCCGGCC
CCAGCAGTTCGACGTTATGGTTATGCCCAACCTTTACGGTGGCATTCTCT
CCAACATTGGTTCTGCTCTTGTGGGTGGACCTGGTGTTGTCCCTGGTTGC
AACATGGGCCGCGACGTTGCTGTGTTCGAGCCAGGCTGCCGTCACGTTGG
CCTTGACATCAAGGGCAAGGACCAGGCTAACCCTAGCGCTATGATCCTTT
CTGGCTCTATGCTTCTACGCCACCTGGGATTGGACGACCATGCCAACCGC
ATCTCCAAGGCCGTCTATGATGTGATCGGTGAGGGATGTGCGTCAGCCCT
TCCATTCGCATGCAGTACCGTACTGCTAGAGACACATGGTTTATTGACTC
TATAACTCAAGCCTTTGCTAGCGTTCAGTCCGATATCTTCAAGCCCACTA
AGTATGGCGGCAAATACACCGTCACTCTTATCCCAGTAAAACGAGGACCC
GCGATATGGGTGGACAGGCTACCACCCACGAGTTCACCAGGGCAGTCTTG
GATAAGATGGAGGCTGCTCTGTAAGTGACGGAATCGGAGCCGAGGTTGCT
GAATCGGTCAAGACTATCTTCAAGGCCGACAACGTTCCCATCGAGTGGGA
GCAGGTAGATGTTAGCGGTGTTGACACCGGTAACAAACACTCAGAGGAGC
TTTTCAAGGAGTCCATTGCTTCTCTGCGCCGTAACAAGCTGGGTCTCAAG
GGTATCCTCTTCACCCCGGTTGAGCGCTCCGGCCACCAGTCGTTCAACGT
TGCTCTCCGTCAGGAGCTGGATATTTTCGCCTCTATCGTCCTCATCAAGA
ACATTCCCGGCTACAAGACCCGTCACGAGAATGTTGATCTTTGCATTATC
CGTGAGAACACCGAGGGTGAATACTCTGGTCTCGAACACCAGTCCGTGCA
GGGGGTTGTTGAGTCCCTGAAGATTATCACTCGCGCCAAATCTGAGCGCA
TTGCCAAGTTTGCCTTTGGTTTCGCTCTTGCCAACAACCGCAAGAAGGTT
ACTTGCATCCACAAGGCCAACATCATGAAGCTTGCGGATGGTCTTTTCCG
TAGCACCTTCCACAAGGTCGCCGAGAACTACCCGACTTTGGAGGTTAACG
ACATGATTGTCGACAACGCCTCCATGCAGGCTGTTTCCCGGCCCCAGCAG
TTCGACGTTATGGTTATGCCCAACCTTTACGGTGGCATTCTCTCCAACAT
TGGTTCTGCTCTTGTGGGTGGACCTGGTGTTGTCCCTGGTTGCAACATGG
GCCGCGACGTTGCTGTGTTCGAGCCAGGCTGCCGTCACGTTGGCCTTGAC
ATCAAGGGCAAGGACCAGGCTAACCCTAGCGCTATGATCCTTTCTGGCTC
TATGCTTCTACGCCACCTGGGATTGGACGACCATGCCAACCGCATCTCCA
AGGCCGTCTATGATGTGATCGGTGAGGGATGTGCGTCAGCCCTTCCATTC
GCATGCAGTACCGTACTGCTAGAGACACATGGTTTATTGACTCTATAACT
CAAGCCTTTGCTAGCGTTCAGTCCGATATCTTCAAGCCCACTAAGTATGG
CGGCAAATACACCGTCACTCTTATCCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0051287NAD binding
GO:0004449isocitrate dehydrogenase (NAD+) activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IDH1CAN33_44805Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44805-T1CAN33_44805-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44805-T1.cdsCAN33_44805-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44805-T1.exon3CAN33_44805-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_44805-T1.exon2CAN33_44805-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_44805-T1.exon1CAN33_44805-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR019818
DBxrefInterPro:IPR004434
DBxrefInterPro:IPR024084
DBxrefPFAM:PF00180
Productisocitrate dehydrogenase (NAD( )) idh1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1579635..1580914 -
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