You are here

Home

CAN33_45865-T1, CAN33_45865-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_45865-T1
Unique NameCAN33_45865-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2309633..2312163-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_45865-T1 ID=CAN33_45865-T1|Name=CAN33_45865-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2531bp|location=Sequence derived from alignment at NKJJ01000022.1:2309633..2312163- (Aspergillus niger FDAARGOS_311)
ATGACCACGTCACATTCACCATCACCACAAATCCGACAAGAACCCACCAC
TCACTTCTATCCATCTCCATCTCCATCTCCTCCCGAGTCGAACAACCAGC
ATCATGGTAGCATCGAAAACCATCTCGACCGCTACGAGAAAACCACCTCA
TTATCAGGAACCATCAACATCACCGTCGAATCCCCTTCCTCTTCCTCCCA
CGACGAGGTGAACTCGAAATCCACTTGGTCGAGATCTTATCATGACTAAT
TAAGGGATATAATGTCTGATGAGTTGTTCGACTGATTGATAGTTCTACTA
AAGTCCAGTTGAGTCTCCGATGGCGTTATTAAATAGCTATGTGGAATTCT
TCATGATCGAGATATACGTGGTATCTTTTTCAAGAAAAAACTACCTTTGT
ATTTGTTACGCTACTGCGTGTATATTGATAAACGGACTTTATAGAAAAAC
CCCAGAAATGCAGCAATCTCTATTACAAGATGTTGGGTGTAGAGGCAGTG
GTGGGGAGGGTTTATTAATGATAATCATATTCTATGACCTCTTTCATTCC
TGTCTAGTACTAGATGTATGTCCAGTCATCCTGCCTCCGGTATAGTCTAG
ACTATTATGGCCGCAGGATTTGGATCTACCTATTACTCTGTTATAAGAAA
TGAATGGGACCTCCTGTTAGAATTCTTCTTCTGTTTCAGCCAGGGTGAAG
ATCATTATACCACACCCTGGTCACTGGATCTAGTATCTAGTACTTACTAT
TAGCATTCATCGCTATTGTTCTTCATTAGAATCAAGTACTAGTTGTCCTT
TCCATGGTTCCTTCTGCTATGTGTATTGTACTGTGAAGTTCGGTTTGTAG
TAGGGTATGTATCTACTAGATTATTTGTCTTGGATAGGTAACATAAATAT
GAAGGAACGAGGGCTATGCTGTGCTATGCTGTGCTGCATTGTAGAGGGCT
CTGTGTAATGCTATGGATTGTTTGGTACATAGTAGTAAATAGAGGGTTTA
ATCTGTGTTAGGATGGGTTGGGTATGTGTGTAACCGGGGTCAGGTAGTGG
TCAACCCCCCTTCGGTCGAGTCACCGGGTTTTGCTAATTAGTATAGTAAA
TATACTATAATAATTCAGTTGGTATTATTGAGCTGGTTATCGAGGGTAGT
CAACTACAGGCATGAGGTGACAATCGATATCGACTGTAGCAGATAATGCA
CTGGAGTATATTACTATCGTAGTTTCACTCGGACTAGCATCTGCAGGTGG
AGCTATGGCAAAGCAAAGTGTCCTGCTGATGACATGCAGAAGGCCCATTC
CTTGTCTGGAGGGACTTGGCTGGGCTTGGCGTGATGCAGCTTGGTCTGCC
TGTTCTTGATTCGAACGTTACTACTCGACTGCTAGTGTACGTTGATTCCC
CTACATGTTTCCTGTCCTTGTTAGTGCAAAGCGACGAAGGTGACGCTGCA
TGCAAACGGGAAAGCTTGAATTGAGCCGACCCGTGTTTAGGTCGATTCCT
ATGGCAGCAGCGGGGCGGGTTATAGCAGGAGGAGCTTGATATTAACAGAT
GATGGCTGCATATTTACGTACTAGAAGATGTTCGTTCGTGAGGATTGAGG
TTTGGACTGGACGGCTATGCATGGTTCCCGAAGTGATGGTCATGGGTAGG
AGATCTGGGGTTTGTAATGGTTGGGTTTCTGGTTCGAGTCAGTGTTCTTT
CTACATTATCTACTTGCTCTCTACAGGGTATAGAGTACGTACTTTTTGCC
ACTTTGAAGGAATTGAATTGTAAGCGAGTGGCAGAGAGCCTCGGTAGGGG
TGGGGATGGACATGGGAGATGCTTTGGTTAGCTTCGAACCTTGTTGATAT
GTATGTAGTATGCATCAAAACAATTCATCTCCACTGATAGCACGCAAGTA
AGTAAGTTTGCCATCCTACGAAAGATGATGCATCTGGCCCCAGTATGGAT
GAAGGTTGGCCCCGGAAGGCAGAGGAAGGAAGTGAATCCATTGAATACTG
ACTGAACGGTAAAGTTACGGTCGGCATGACGCACGGTCCCTGATCGACCC
TAGCGCCCGCGCTCGTGACCTTCCAGTCCGACTGGGTCATCTGCCCTTTG
CTTTTCCCCTCCACCACTCTCCGTGCCTCGTGGCCCCAACAAACACTGGA
AGCCACAGGAATGATGACAGTTCCTGAGCAATGACCGTTCAGTCTCAGCA
GTCTCAGCACGGGAAGGACTGAATTCCTGGAGTCGATCCATGGTCGGCTA
CAAGCCCTCGTTCAATGCGCATTATCAAATGTAACCGTTGTGGTCGGAGA
TGACTTGACTCCGGCCTGGGATTGTTCCGATTGCATTCTGCATGACTGGC
GTAACCCTACCGAATGAGTCAAGAAAGATAAACAAAAAGTATACCAGTTT
GTTGCCTCGTTCTGCTGATGATCACGCAGGAGTTCCTGGACACAACAGCA
ACAGGGCCCCTAACTATCTCCACTGCTTGCTTACTGGCGCTGGATGTGCT
CGAGCTCTCCGGCCAGTCGTTTCCCAAATAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:2309633..2312163-

>CAN33_45865-T1 ID=CAN33_45865-T1|Name=CAN33_45865-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=618bp|location=Sequence derived from alignment at NKJJ01000022.1:2309633..2312163- (Aspergillus niger FDAARGOS_311)
GAGTTCCTGGACACAACAGCAACAGGGCCCCTAACTATCTCCACTGCTTG
CTTACTGGCGCTGGATGTGCTCGAGCTCTCCGGCCAGTCGTTTCCCAAAT
AGATGACCACGTCACATTCACCATCACCACAAATCCGACAAGAACCCACC
ACTCACTTCTATCCATCTCCATCTCCATCTCCTCCCGAGTCGAACAACCA
GCATCATGGTAGCATCGAAAACCATCTCGACCGCTACGAGAAAACCACCT
CATTATCAGGAACCATCAACATCACCGTCGAATCCCCTTCCTCTTCCTCC
CACGACGAGGAGTTCCTGGACACAACAGCAACAGGGCCCCTAACTATCTC
CACTGCTTGCTTACTGGCGCTGGATGTGCTCGAGCTCTCCGGCCAGTCGT
TTCCCAAATAGATGACCACGTCACATTCACCATCACCACAAATCCGACAA
GAACCCACCACTCACTTCTATCCATCTCCATCTCCATCTCCTCCCGAGTC
GAACAACCAGCATCATGGTAGCATCGAAAACCATCTCGACCGCTACGAGA
AAACCACCTCATTATCAGGAACCATCAACATCACCGTCGAATCCCCTTCC
TCTTCCTCCCACGACGAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_45865CAN33_45865Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45865-T1CAN33_45865-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45865-T1.cdsCAN33_45865-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45865-T1.exon2CAN33_45865-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_45865-T1.exon1CAN33_45865-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2309633..2312163 -
Powered by Drupal