You are here

Home

CAN33_45910-T1, CAN33_45910-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_45910-T1
Unique NameCAN33_45910-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2343055..2344110-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_45910-T1 ID=CAN33_45910-T1|Name=CAN33_45910-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1056bp|location=Sequence derived from alignment at NKJJ01000022.1:2343055..2344110- (Aspergillus niger FDAARGOS_311)
ATGAATACCAGTCAGGAAGCTAAGTTTCCTCTTCACGAGGCTGCCCGGGA
GGGCAAAAGTACGAGGCATTCAACCCGGACATTGTGATAAGCTCTAACCG
ATCTCCTCCAGCTCAAATCGCTGAATCTCTCCTCAGCGTACGTACTCCAA
AGCTGCCCCGCACCGCCATCAGGGAGCTCTATACAACCTCACTATCAGCT
CAAAGACCGTCTCGCTGATGGCTTCTAGGCCAACCCCAAGCTAGCAAATG
TCAAAGATGACGATGATCGCCTTCCCATCCACTGGGCGGTAGCATACAAC
CGTCTCCCGATTGTGGAGCTACTGACATCCAACAAGCACTTTGATCCCGA
TGTCGAGGTCCGTTATTGTCTCATCTTTTGTAATGTACCACGCCAGAACA
TCACTAATATTTCCATAGGATGGCTCCGGCTGGACACCACTCATGATTGC
ATCTAGCTTGAAGAACGCCGAAGGCGATCCCATCATCGATCTCCTCCTCA
AGAAAGGCGCAGACGTCAGCACGAAGAGCGTCTCGGGCCAGGTACTTCCC
GTCCCTTCCTCCTAGGCCACCTTTTCCCTAACTTAATATCTGTGTCTACA
ATAGAACGCCCTCCACTTTGCAACTTCCAAAGCCAACCTCTCCACCGTCC
GCACCCTCATCGCCAACAAATGCAGCGCAAGAGTAAAGGATAGACGCGGA
CAGCTGCCTCTGCACCGAGCAGCGGCGATTGGATCCTCGCCTATCATCAA
GATCCTTCTGGAGGAGGGGAAGAGTCCCGTCAATGCAACGGATGTTGATG
GGCTGACAGCTTTACATCATGCCGTGTCAGAGGGTCACGGCGATGCAGCG
ATTACGTTGCTCAAGGCTGGTGCGGAGGCAGATAAGAGGGATTCGAATGG
TGTTTTGGCCATTGATATGGCGCCGGATAGCAAGGTTCGTCTTCTTCCTT
TTTTATCATATATAAATCGAGGTGGGAGTGTGTGCTGATAGTGGTATGCG
TATAGGTGCGGAGCTATATCCTGCAAACAGCGGAGAGGGAGGGGATCGAG
TTATAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:2343055..2344110-

>CAN33_45910-T1 ID=CAN33_45910-T1|Name=CAN33_45910-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4302bp|location=Sequence derived from alignment at NKJJ01000022.1:2343055..2344110- (Aspergillus niger FDAARGOS_311)
GTGCGGAGCTATATCCTGCAAACAGCGGAGAGGGAGGGGATCGAGTTATA
GAACGCCCTCCACTTTGCAACTTCCAAAGCCAACCTCTCCACCGTCCGCA
CCCTCATCGCCAACAAATGCAGCGCAAGAGTAAAGGATAGACGCGGACAG
CTGCCTCTGCACCGAGCAGCGGCGATTGGATCCTCGCCTATCATCAAGAT
CCTTCTGGAGGAGGGGAAGAGTCCCGTCAATGCAACGGATGTTGATGGGC
TGACAGCTTTACATCATGCCGTGTCAGAGGGTCACGGCGATGCAGCGATT
ACGTTGCTCAAGGCTGGTGCGGAGGCAGATAAGAGGGATTCGAATGGTGT
TTTGGCCATTGATATGGCGCCGGATAGCAAGGATGGCTCCGGCTGGACAC
CACTCATGATTGCATCTAGCTTGAAGAACGCCGAAGGCGATCCCATCATC
GATCTCCTCCTCAAGAAAGGCGCAGACGTCAGCACGAAGAGCGTCTCGGG
CCAGGCCAACCCCAAGCTAGCAAATGTCAAAGATGACGATGATCGCCTTC
CCATCCACTGGGCGGTAGCATACAACCGTCTCCCGATTGTGGAGCTACTG
ACATCCAACAAGCACTTTGATCCCGATGTCGAGCTCAAATCGCTGAATCT
CTCCTCAGCATGAATACCAGTCAGGAAGCTAAGTTTCCTCTTCACGAGGC
TGCCCGGGAGGGCAAAAGTGCGGAGCTATATCCTGCAAACAGCGGAGAGG
GAGGGGATCGAGTTATAGAACGCCCTCCACTTTGCAACTTCCAAAGCCAA
CCTCTCCACCGTCCGCACCCTCATCGCCAACAAATGCAGCGCAAGAGTAA
AGGATAGACGCGGACAGCTGCCTCTGCACCGAGCAGCGGCGATTGGATCC
TCGCCTATCATCAAGATCCTTCTGGAGGAGGGGAAGAGTCCCGTCAATGC
AACGGATGTTGATGGGCTGACAGCTTTACATCATGCCGTGTCAGAGGGTC
ACGGCGATGCAGCGATTACGTTGCTCAAGGCTGGTGCGGAGGCAGATAAG
AGGGATTCGAATGGTGTTTTGGCCATTGATATGGCGCCGGATAGCAAGGA
TGGCTCCGGCTGGACACCACTCATGATTGCATCTAGCTTGAAGAACGCCG
AAGGCGATCCCATCATCGATCTCCTCCTCAAGAAAGGCGCAGACGTCAGC
ACGAAGAGCGTCTCGGGCCAGGCCAACCCCAAGCTAGCAAATGTCAAAGA
TGACGATGATCGCCTTCCCATCCACTGGGCGGTAGCATACAACCGTCTCC
CGATTGTGGAGCTACTGACATCCAACAAGCACTTTGATCCCGATGTCGAG
CTCAAATCGCTGAATCTCTCCTCAGCATGAATACCAGTCAGGAAGCTAAG
TTTCCTCTTCACGAGGCTGCCCGGGAGGGCAAAAGTGCGGAGCTATATCC
TGCAAACAGCGGAGAGGGAGGGGATCGAGTTATAGAACGCCCTCCACTTT
GCAACTTCCAAAGCCAACCTCTCCACCGTCCGCACCCTCATCGCCAACAA
ATGCAGCGCAAGAGTAAAGGATAGACGCGGACAGCTGCCTCTGCACCGAG
CAGCGGCGATTGGATCCTCGCCTATCATCAAGATCCTTCTGGAGGAGGGG
AAGAGTCCCGTCAATGCAACGGATGTTGATGGGCTGACAGCTTTACATCA
TGCCGTGTCAGAGGGTCACGGCGATGCAGCGATTACGTTGCTCAAGGCTG
GTGCGGAGGCAGATAAGAGGGATTCGAATGGTGTTTTGGCCATTGATATG
GCGCCGGATAGCAAGGATGGCTCCGGCTGGACACCACTCATGATTGCATC
TAGCTTGAAGAACGCCGAAGGCGATCCCATCATCGATCTCCTCCTCAAGA
AAGGCGCAGACGTCAGCACGAAGAGCGTCTCGGGCCAGGCCAACCCCAAG
CTAGCAAATGTCAAAGATGACGATGATCGCCTTCCCATCCACTGGGCGGT
AGCATACAACCGTCTCCCGATTGTGGAGCTACTGACATCCAACAAGCACT
TTGATCCCGATGTCGAGCTCAAATCGCTGAATCTCTCCTCAGCATGAATA
CCAGTCAGGAAGCTAAGTTTCCTCTTCACGAGGCTGCCCGGGAGGGCAAA
AGTGCGGAGCTATATCCTGCAAACAGCGGAGAGGGAGGGGATCGAGTTAT
AGAACGCCCTCCACTTTGCAACTTCCAAAGCCAACCTCTCCACCGTCCGC
ACCCTCATCGCCAACAAATGCAGCGCAAGAGTAAAGGATAGACGCGGACA
GCTGCCTCTGCACCGAGCAGCGGCGATTGGATCCTCGCCTATCATCAAGA
TCCTTCTGGAGGAGGGGAAGAGTCCCGTCAATGCAACGGATGTTGATGGG
CTGACAGCTTTACATCATGCCGTGTCAGAGGGTCACGGCGATGCAGCGAT
TACGTTGCTCAAGGCTGGTGCGGAGGCAGATAAGAGGGATTCGAATGGTG
TTTTGGCCATTGATATGGCGCCGGATAGCAAGGATGGCTCCGGCTGGACA
CCACTCATGATTGCATCTAGCTTGAAGAACGCCGAAGGCGATCCCATCAT
CGATCTCCTCCTCAAGAAAGGCGCAGACGTCAGCACGAAGAGCGTCTCGG
GCCAGGCCAACCCCAAGCTAGCAAATGTCAAAGATGACGATGATCGCCTT
CCCATCCACTGGGCGGTAGCATACAACCGTCTCCCGATTGTGGAGCTACT
GACATCCAACAAGCACTTTGATCCCGATGTCGAGCTCAAATCGCTGAATC
TCTCCTCAGCATGAATACCAGTCAGGAAGCTAAGTTTCCTCTTCACGAGG
CTGCCCGGGAGGGCAAAAGTGCGGAGCTATATCCTGCAAACAGCGGAGAG
GGAGGGGATCGAGTTATAGAACGCCCTCCACTTTGCAACTTCCAAAGCCA
ACCTCTCCACCGTCCGCACCCTCATCGCCAACAAATGCAGCGCAAGAGTA
AAGGATAGACGCGGACAGCTGCCTCTGCACCGAGCAGCGGCGATTGGATC
CTCGCCTATCATCAAGATCCTTCTGGAGGAGGGGAAGAGTCCCGTCAATG
CAACGGATGTTGATGGGCTGACAGCTTTACATCATGCCGTGTCAGAGGGT
CACGGCGATGCAGCGATTACGTTGCTCAAGGCTGGTGCGGAGGCAGATAA
GAGGGATTCGAATGGTGTTTTGGCCATTGATATGGCGCCGGATAGCAAGG
ATGGCTCCGGCTGGACACCACTCATGATTGCATCTAGCTTGAAGAACGCC
GAAGGCGATCCCATCATCGATCTCCTCCTCAAGAAAGGCGCAGACGTCAG
CACGAAGAGCGTCTCGGGCCAGGCCAACCCCAAGCTAGCAAATGTCAAAG
ATGACGATGATCGCCTTCCCATCCACTGGGCGGTAGCATACAACCGTCTC
CCGATTGTGGAGCTACTGACATCCAACAAGCACTTTGATCCCGATGTCGA
GCTCAAATCGCTGAATCTCTCCTCAGCATGAATACCAGTCAGGAAGCTAA
GTTTCCTCTTCACGAGGCTGCCCGGGAGGGCAAAAGTGCGGAGCTATATC
CTGCAAACAGCGGAGAGGGAGGGGATCGAGTTATAGAACGCCCTCCACTT
TGCAACTTCCAAAGCCAACCTCTCCACCGTCCGCACCCTCATCGCCAACA
AATGCAGCGCAAGAGTAAAGGATAGACGCGGACAGCTGCCTCTGCACCGA
GCAGCGGCGATTGGATCCTCGCCTATCATCAAGATCCTTCTGGAGGAGGG
GAAGAGTCCCGTCAATGCAACGGATGTTGATGGGCTGACAGCTTTACATC
ATGCCGTGTCAGAGGGTCACGGCGATGCAGCGATTACGTTGCTCAAGGCT
GGTGCGGAGGCAGATAAGAGGGATTCGAATGGTGTTTTGGCCATTGATAT
GGCGCCGGATAGCAAGGATGGCTCCGGCTGGACACCACTCATGATTGCAT
CTAGCTTGAAGAACGCCGAAGGCGATCCCATCATCGATCTCCTCCTCAAG
AAAGGCGCAGACGTCAGCACGAAGAGCGTCTCGGGCCAGGCCAACCCCAA
GCTAGCAAATGTCAAAGATGACGATGATCGCCTTCCCATCCACTGGGCGG
TAGCATACAACCGTCTCCCGATTGTGGAGCTACTGACATCCAACAAGCAC
TTTGATCCCGATGTCGAGCTCAAATCGCTGAATCTCTCCTCAGCATGAAT
ACCAGTCAGGAAGCTAAGTTTCCTCTTCACGAGGCTGCCCGGGAGGGCAA
AA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_45910CAN33_45910Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45910-T1CAN33_45910-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45910-T1.cdsCAN33_45910-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45910-T1.exon6CAN33_45910-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_45910-T1.exon5CAN33_45910-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_45910-T1.exon4CAN33_45910-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_45910-T1.exon3CAN33_45910-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_45910-T1.exon2CAN33_45910-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_45910-T1.exon1CAN33_45910-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
ProductAnkyrin repeats (3 copies) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2343055..2344110 -
Powered by Drupal