CAN33_47250-T1, CAN33_47250-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview


Name	CAN33_47250-T1
Unique Name	CAN33_47250-T1
Type	mRNA
Organism	Aspergillus niger FDAARGOS_311

Sequences

The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:3162123..3163880+
coding sequence from alignment at NKJJ01000022.1:3162123..3163880+

mRNA from alignment at NKJJ01000022.1:3162123..3163880+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CAN33_47250-T1 ID=CAN33_47250-T1|Name=CAN33_47250-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1758bp|location=Sequence derived from alignment at NKJJ01000022.1:3162123..3163880+ (Aspergillus niger FDAARGOS_311)
ATGCCTCTCGATGAAGAAGGGGCCAAATGGTCTTGGTATGACTCTTTCCG
CCGGTGAAGAGGCTCTCTGCTAACCAGATCCTTCCACTAGTGAGCCATGT
ATCCGTGGCCATCGGTCCTCGAAATGCCAGCACTTCGACAGGATGATGAT
GAAGGTCCCAAAGGCCGGACGACCGCTTGCTAGATGCCCTCATCCGAAGG
GAACTTGCAGCTGCCAGAAACTATATGCGTTCATGATCCGCATCCCCAAA
GGTGGGTAAATGCGACGGATATGGCCTATCGTTTATCCTTCGGTTGTAGT
CGCGTCTTTGGTGACTGACTTCGACTGTGCCATGTAGGCTCGACTTGCTT
GTGCAGACCAGTGTACCAAGTGCCTGCTGATGCGGCGGAATCTGCTTCAA
CCACCCCGATTCCTGCTCCTCCGATGCCGATTGCTGCTCCCAATAAAATC
CAGAAACCCATCAAACGACAAGTCAAGACGGCCCCAGAGAATCTTACCAA
AGCCTTGAACTCCATACCAGAATTCGGAAACCAGCAATTGGAACATGGAA
AATTGGGCCGACCATCGCCTTATACGGCTCAGGAACAACGTTTGAGCAGT
TCATATGATATCATCAAGCAAGAACCAACTCCCTCGCACAAGGCCTTCGA
GCGCGCTAGCGAAGATAAGGCGCCGCAGGGCGGCAGCTGTTGCTCTCGCA
AGCCCCAGCCCTCACAGACTATAACTCCGGAGGTTCAAGCTCCCGCGGTT
CAACGTTCCTGTTGTAGCAAGTCCAAGCCGGCGGCTCAAGACGTCGAGAT
GGAAGGCAGCATTCTTAACAGTTCTGATTACTTCCACCCTCCAGTCTTTG
ACAGCGATAACGCAAGATACACCCCGAATTCTATTCCTCAAGTTTCGACA
TGGCAGGATTTCCAAGCAGCGAAGCAGAGCCAGTACATGCAGCCTTTTGC
ATTGCCCGTATCCGAGTCCGGTTATCTTCCCATGGCCGGACCTGCCGCAG
ATATTCGTCCTAAGCCACTAGACTTTCAGCATCCGCCTGCTTTCAACAAC
TATGATCTCTTCAGCAACCAGACTTCTCAGCAACCGTCGGAGAATACGCA
GAATGTCGTTGCAGATCCAGAAAGTACTGCTAGCGATGACGCCCATGACT
GTAGCTGTGGCGATGGTTGTCAATGTCTGGGCTGCGCGTCTCACCCGTTC
AACAACACTACACGACAGCATGTCCAACAAATGGGCCTCCTGGTGGCCCT
GAATGATGATGAGCAAAGCCCCGAAAGGCTGAACAGTCATAGAGGCTCCC
CTCTGCAAAGTCAACCACCAGACTTCTCATCATTACAATATTCCCTCACA
AACTTCGGAAATCCTCTGGGTGAAGGCTTTCACCCTGTTGCAATGCACCC
ATATGCCCAACAGGGTACGGATCCAAGTCACGTAAATAATGGCTATTCTT
CTCCACCTGCGGATTATCTAGGACAGCAGCTCATGGTGCCGTCAGAGTAC
TATACTCTCGAGTACTCAGTGGGGCTGCCTAGTGCTTGCGTCGATACAAC
TGGAAGTTGCCAGTGCGGGAATGACTGTACCTGTGTTGGCTGTCTCACCC
ACAGCGGACACAATGGACTGCCTCTTGAGCCCGCCATGCCCGAGAGCAAC
TGGGACCACATGAATCTTCCAGGTTTCTCCATGGACGCCGCTGGGCACAG
CCCGTCGCAGATGCCCGTGATGGATAACTTTGTCGCTCATTCGAACTCTA
TGCTGTAG

Coding sequence (CDS) from alignment at NKJJ01000022.1:3162123..3163880+

>CAN33_47250-T1 ID=CAN33_47250-T1|Name=CAN33_47250-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4851bp|location=Sequence derived from alignment at NKJJ01000022.1:3162123..3163880+ (Aspergillus niger FDAARGOS_311)
ATGCCTCTCGATGAAGAAGGGGCCAAATGGTCTTGTGAGCCATGTATCCG
TGGCCATCGGTCCTCGAAATGCCAGCACTTCGACAGGATGATGATGAAGG
TCCCAAAGGCCGGACGACCGCTTGCTAGATGCCCTCATCCGAAGGGAACT
TGCAGCTGCCAGAAACTATATGCGTTCATGATCCGCATCCCCAAAGGCTC
GACTTGCTTGTGCAGACCAGTGTACCAAGTGCCTGCTGATGCGGCGGAAT
CTGCTTCAACCACCCCGATTCCTGCTCCTCCGATGCCGATTGCTGCTCCC
AATAAAATCCAGAAACCCATCAAACGACAAGTCAAGACGGCCCCAGAGAA
TCTTACCAAAGCCTTGAACTCCATACCAGAATTCGGAAACCAGCAATTGG
AACATGGAAAATTGGGCCGACCATCGCCTTATACGGCTCAGGAACAACGT
TTGAGCAGTTCATATGATATCATCAAGCAAGAACCAACTCCCTCGCACAA
GGCCTTCGAGCGCGCTAGCGAAGATAAGGCGCCGCAGGGCGGCAGCTGTT
GCTCTCGCAAGCCCCAGCCCTCACAGACTATAACTCCGGAGGTTCAAGCT
CCCGCGGTTCAACGTTCCTGTTGTAGCAAGTCCAAGCCGGCGGCTCAAGA
CGTCGAGATGGAAGGCAGCATTCTTAACAGTTCTGATTACTTCCACCCTC
CAGTCTTTGACAGCGATAACGCAAGATACACCCCGAATTCTATTCCTCAA
GTTTCGACATGGCAGGATTTCCAAGCAGCGAAGCAGAGCCAGTACATGCA
GCCTTTTGCATTGCCCGTATCCGAGTCCGGTTATCTTCCCATGGCCGGAC
CTGCCGCAGATATTCGTCCTAAGCCACTAGACTTTCAGCATCCGCCTGCT
TTCAACAACTATGATCTCTTCAGCAACCAGACTTCTCAGCAACCGTCGGA
GAATACGCAGAATGTCGTTGCAGATCCAGAAAGTACTGCTAGCGATGACG
CCCATGACTGTAGCTGTGGCGATGGTTGTCAATGTCTGGGCTGCGCGTCT
CACCCGTTCAACAACACTACACGACAGCATGTCCAACAAATGGGCCTCCT
GGTGGCCCTGAATGATGATGAGCAAAGCCCCGAAAGGCTGAACAGTCATA
GAGGCTCCCCTCTGCAAAGTCAACCACCAGACTTCTCATCATTACAATAT
TCCCTCACAAACTTCGGAAATCCTCTGGGTGAAGGCTTTCACCCTGTTGC
AATGCACCCATATGCCCAACAGGGTACGGATCCAAGTCACGTAAATAATG
GCTATTCTTCTCCACCTGCGGATTATCTAGGACAGCAGCTCATGGTGCCG
TCAGAGTACTATACTCTCGAGTACTCAGTGGGGCTGCCTAGTGCTTGCGT
CGATACAACTGGAAGTTGCCAGTGCGGGAATGACTGTACCTGTGTTGGCT
GTCTCACCCACAGCGGACACAATGGACTGCCTCTTGAGCCCGCCATGCCC
GAGAGCAACTGGGACCACATGAATCTTCCAGGTTTCTCCATGGACGCCGC
TGGGCACAGCCCGTCGCAGATGCCCGTGATGGATAACTTTGTCGCTCATT
CGAACTCTATGCTGTAGATGCCTCTCGATGAAGAAGGGGCCAAATGGTCT
TGTGAGCCATGTATCCGTGGCCATCGGTCCTCGAAATGCCAGCACTTCGA
CAGGATGATGATGAAGGTCCCAAAGGCCGGACGACCGCTTGCTAGATGCC
CTCATCCGAAGGGAACTTGCAGCTGCCAGAAACTATATGCGTTCATGATC
CGCATCCCCAAAGGCTCGACTTGCTTGTGCAGACCAGTGTACCAAGTGCC
TGCTGATGCGGCGGAATCTGCTTCAACCACCCCGATTCCTGCTCCTCCGA
TGCCGATTGCTGCTCCCAATAAAATCCAGAAACCCATCAAACGACAAGTC
AAGACGGCCCCAGAGAATCTTACCAAAGCCTTGAACTCCATACCAGAATT
CGGAAACCAGCAATTGGAACATGGAAAATTGGGCCGACCATCGCCTTATA
CGGCTCAGGAACAACGTTTGAGCAGTTCATATGATATCATCAAGCAAGAA
CCAACTCCCTCGCACAAGGCCTTCGAGCGCGCTAGCGAAGATAAGGCGCC
GCAGGGCGGCAGCTGTTGCTCTCGCAAGCCCCAGCCCTCACAGACTATAA
CTCCGGAGGTTCAAGCTCCCGCGGTTCAACGTTCCTGTTGTAGCAAGTCC
AAGCCGGCGGCTCAAGACGTCGAGATGGAAGGCAGCATTCTTAACAGTTC
TGATTACTTCCACCCTCCAGTCTTTGACAGCGATAACGCAAGATACACCC
CGAATTCTATTCCTCAAGTTTCGACATGGCAGGATTTCCAAGCAGCGAAG
CAGAGCCAGTACATGCAGCCTTTTGCATTGCCCGTATCCGAGTCCGGTTA
TCTTCCCATGGCCGGACCTGCCGCAGATATTCGTCCTAAGCCACTAGACT
TTCAGCATCCGCCTGCTTTCAACAACTATGATCTCTTCAGCAACCAGACT
TCTCAGCAACCGTCGGAGAATACGCAGAATGTCGTTGCAGATCCAGAAAG
TACTGCTAGCGATGACGCCCATGACTGTAGCTGTGGCGATGGTTGTCAAT
GTCTGGGCTGCGCGTCTCACCCGTTCAACAACACTACACGACAGCATGTC
CAACAAATGGGCCTCCTGGTGGCCCTGAATGATGATGAGCAAAGCCCCGA
AAGGCTGAACAGTCATAGAGGCTCCCCTCTGCAAAGTCAACCACCAGACT
TCTCATCATTACAATATTCCCTCACAAACTTCGGAAATCCTCTGGGTGAA
GGCTTTCACCCTGTTGCAATGCACCCATATGCCCAACAGGGTACGGATCC
AAGTCACGTAAATAATGGCTATTCTTCTCCACCTGCGGATTATCTAGGAC
AGCAGCTCATGGTGCCGTCAGAGTACTATACTCTCGAGTACTCAGTGGGG
CTGCCTAGTGCTTGCGTCGATACAACTGGAAGTTGCCAGTGCGGGAATGA
CTGTACCTGTGTTGGCTGTCTCACCCACAGCGGACACAATGGACTGCCTC
TTGAGCCCGCCATGCCCGAGAGCAACTGGGACCACATGAATCTTCCAGGT
TTCTCCATGGACGCCGCTGGGCACAGCCCGTCGCAGATGCCCGTGATGGA
TAACTTTGTCGCTCATTCGAACTCTATGCTGTAGATGCCTCTCGATGAAG
AAGGGGCCAAATGGTCTTGTGAGCCATGTATCCGTGGCCATCGGTCCTCG
AAATGCCAGCACTTCGACAGGATGATGATGAAGGTCCCAAAGGCCGGACG
ACCGCTTGCTAGATGCCCTCATCCGAAGGGAACTTGCAGCTGCCAGAAAC
TATATGCGTTCATGATCCGCATCCCCAAAGGCTCGACTTGCTTGTGCAGA
CCAGTGTACCAAGTGCCTGCTGATGCGGCGGAATCTGCTTCAACCACCCC
GATTCCTGCTCCTCCGATGCCGATTGCTGCTCCCAATAAAATCCAGAAAC
CCATCAAACGACAAGTCAAGACGGCCCCAGAGAATCTTACCAAAGCCTTG
AACTCCATACCAGAATTCGGAAACCAGCAATTGGAACATGGAAAATTGGG
CCGACCATCGCCTTATACGGCTCAGGAACAACGTTTGAGCAGTTCATATG
ATATCATCAAGCAAGAACCAACTCCCTCGCACAAGGCCTTCGAGCGCGCT
AGCGAAGATAAGGCGCCGCAGGGCGGCAGCTGTTGCTCTCGCAAGCCCCA
GCCCTCACAGACTATAACTCCGGAGGTTCAAGCTCCCGCGGTTCAACGTT
CCTGTTGTAGCAAGTCCAAGCCGGCGGCTCAAGACGTCGAGATGGAAGGC
AGCATTCTTAACAGTTCTGATTACTTCCACCCTCCAGTCTTTGACAGCGA
TAACGCAAGATACACCCCGAATTCTATTCCTCAAGTTTCGACATGGCAGG
ATTTCCAAGCAGCGAAGCAGAGCCAGTACATGCAGCCTTTTGCATTGCCC
GTATCCGAGTCCGGTTATCTTCCCATGGCCGGACCTGCCGCAGATATTCG
TCCTAAGCCACTAGACTTTCAGCATCCGCCTGCTTTCAACAACTATGATC
TCTTCAGCAACCAGACTTCTCAGCAACCGTCGGAGAATACGCAGAATGTC
GTTGCAGATCCAGAAAGTACTGCTAGCGATGACGCCCATGACTGTAGCTG
TGGCGATGGTTGTCAATGTCTGGGCTGCGCGTCTCACCCGTTCAACAACA
CTACACGACAGCATGTCCAACAAATGGGCCTCCTGGTGGCCCTGAATGAT
GATGAGCAAAGCCCCGAAAGGCTGAACAGTCATAGAGGCTCCCCTCTGCA
AAGTCAACCACCAGACTTCTCATCATTACAATATTCCCTCACAAACTTCG
GAAATCCTCTGGGTGAAGGCTTTCACCCTGTTGCAATGCACCCATATGCC
CAACAGGGTACGGATCCAAGTCACGTAAATAATGGCTATTCTTCTCCACC
TGCGGATTATCTAGGACAGCAGCTCATGGTGCCGTCAGAGTACTATACTC
TCGAGTACTCAGTGGGGCTGCCTAGTGCTTGCGTCGATACAACTGGAAGT
TGCCAGTGCGGGAATGACTGTACCTGTGTTGGCTGTCTCACCCACAGCGG
ACACAATGGACTGCCTCTTGAGCCCGCCATGCCCGAGAGCAACTGGGACC
ACATGAATCTTCCAGGTTTCTCCATGGACGCCGCTGGGCACAGCCCGTCG
CAGATGCCCGTGATGGATAACTTTGTCGCTCATTCGAACTCTATGCTGTA
G

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	DNA-binding transcription factor activity
GO:0003677	DNA binding
GO:0005507	copper ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CAN33_47250	CAN33_47250	Aspergillus niger FDAARGOS_311	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_47250-T1.exon1	CAN33_47250-T1.exon1	Aspergillus niger FDAARGOS_311	exon
CAN33_47250-T1.exon2	CAN33_47250-T1.exon2	Aspergillus niger FDAARGOS_311	exon
CAN33_47250-T1.exon3	CAN33_47250-T1.exon3	Aspergillus niger FDAARGOS_311	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_47250-T1.cds	CAN33_47250-T1.cds	Aspergillus niger FDAARGOS_311	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_47250-T1	CAN33_47250-T1-protein	Aspergillus niger FDAARGOS_311	polypeptide

Properties


Property Name	Value
Note	EggNog:ENOG41
DBxref	InterPro:IPR036395
DBxref	InterPro:IPR001083
DBxref	PFAM:PF00649
Product	Copper fist DNA binding domain family protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger FDAARGOS_311 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NKJJ01000022.1	supercontig	NKJJ01000022.1:3162123..3163880 +

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CAN33_47250-T1, CAN33_47250-T1 (mRNA) Aspergillus niger FDAARGOS_311