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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:4096893..4097818+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_48685-T1 ID=CAN33_48685-T1|Name=CAN33_48685-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=926bp|location=Sequence derived from alignment at NKJJ01000022.1:4096893..4097818+ (Aspergillus niger FDAARGOS_311)
ATGGGTTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGG
AGGGGCTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGTCGATCTCATGC
AAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCGTCCTT
GGCTCGGTGAGTTGAATGGATATTGGTTAAGCCTTGCCACTCTGTGAGAT
GTCGACTGACGATGCTTTCTGTCTAGCATGGCGTTAATATGAACACATCT
CTCACTACTTTCGATGGCTTCCCACGAGACGATATCGATGTTGCCCAAAG
TGAGTCACTACTTTTTGCCTCCGCAGTGCGTCTGCTAAACAGTAGTTAGT
ACGCACCACTCGAGCCCGGATTATTCGACTGCGGAACGATCATAAAGACG
TGATGTCACATCTGGAGAAAGGAATTCACAACCACTTTGCCAATCTGCAG
CGGGCGCAAACTGCCGCACAGTCGGGTGGCGATTTGAATGGCACATTGGG
GTCGCAATCTGGTGTGACTGGGAATAATACCTCCGGCACTGGGGCATCTG
GGTTACCGTTCGCAAAGGTCAATAGTGTGGTGCCTGGAAGTCCCGCAGAC
CAGGCAGGTCTAAGGGTTGGAGATACCGTTCGGGAGTTCGGGAGTGCCAA
CTGGCTCAACCATGAACGTCTCTCCAGGGTGGCGGAGATAGTGCAGCAAA
GTGAAGGGGTAAGTAGGCGATTTGCTTCCAATCTCTTAGTCCTCTAGTCC
AGGGACATGCACTCGGGAGAATGCTCTAGGCTAACGTCTTCTAGCGCACT
GTGGCGGTCAAAGTCGTGAGGAAAGATCCGAGTTCTTCCAGCAGTATCGA
CTTGTCCCTGCAGCTTGTCCCTCGCCGTGATTGGGGCGGTCGGGGCCTGT
TGGGCTGTCATCTCGTGCCGCTGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:4096893..4097818+ >CAN33_48685-T1 ID=CAN33_48685-T1|Name=CAN33_48685-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2880bp|location=Sequence derived from alignment at NKJJ01000022.1:4096893..4097818+ (Aspergillus niger FDAARGOS_311)
ATGGGTTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGG
AGGGGCTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGTCGATCTCATGC
AAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCGTCCTT
GGCTCGCATGGCGTTAATATGAACACATCTCTCACTACTTTCGATGGCTT
CCCACGAGACGATATCGATGTTGCCCAAATACGCACCACTCGAGCCCGGA
TTATTCGACTGCGGAACGATCATAAAGACGTGATGTCACATCTGGAGAAA
GGAATTCACAACCACTTTGCCAATCTGCAGCGGGCGCAAACTGCCGCACA
GTCGGGTGGCGATTTGAATGGCACATTGGGGTCGCAATCTGGTGTGACTG
GGAATAATACCTCCGGCACTGGGGCATCTGGGTTACCGTTCGCAAAGGTC
AATAGTGTGGTGCCTGGAAGTCCCGCAGACCAGGCAGGTCTAAGGGTTGG
AGATACCGTTCGGGAGTTCGGGAGTGCCAACTGGCTCAACCATGAACGTC
TCTCCAGGGTGGCGGAGATAGTGCAGCAAAGTGAAGGGCGCACTGTGGCG
GTCAAAGTCGTGAGGAAAGATCCGAGTTCTTCCAGCAGTATCGACTTGTC
CCTGCAGCTTGTCCCTCGCCGTGATTGGGGCGGTCGGGGCCTGTTGGGCT
GTCATCTCGTGCCGCTGTAGATGGGTTCCAACATTCATGCTCCAACAGTA
GCCTCCGGCCCTACGTCCGGAGGGGCTCCTCCTCGCGATCTGTCCAAGCT
CGGCATGGTCGATCTCATGCAAGAAAAGGAACGCATCGAAGAAGAACTCT
CGGCTCTGAGTAGCGTCCTTGGCTCGCATGGCGTTAATATGAACACATCT
CTCACTACTTTCGATGGCTTCCCACGAGACGATATCGATGTTGCCCAAAT
ACGCACCACTCGAGCCCGGATTATTCGACTGCGGAACGATCATAAAGACG
TGATGTCACATCTGGAGAAAGGAATTCACAACCACTTTGCCAATCTGCAG
CGGGCGCAAACTGCCGCACAGTCGGGTGGCGATTTGAATGGCACATTGGG
GTCGCAATCTGGTGTGACTGGGAATAATACCTCCGGCACTGGGGCATCTG
GGTTACCGTTCGCAAAGGTCAATAGTGTGGTGCCTGGAAGTCCCGCAGAC
CAGGCAGGTCTAAGGGTTGGAGATACCGTTCGGGAGTTCGGGAGTGCCAA
CTGGCTCAACCATGAACGTCTCTCCAGGGTGGCGGAGATAGTGCAGCAAA
GTGAAGGGCGCACTGTGGCGGTCAAAGTCGTGAGGAAAGATCCGAGTTCT
TCCAGCAGTATCGACTTGTCCCTGCAGCTTGTCCCTCGCCGTGATTGGGG
CGGTCGGGGCCTGTTGGGCTGTCATCTCGTGCCGCTGTAGATGGGTTCCA
ACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGGAGGGGCTCCT
CCTCGCGATCTGTCCAAGCTCGGCATGGTCGATCTCATGCAAGAAAAGGA
ACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCGTCCTTGGCTCGCATG
GCGTTAATATGAACACATCTCTCACTACTTTCGATGGCTTCCCACGAGAC
GATATCGATGTTGCCCAAATACGCACCACTCGAGCCCGGATTATTCGACT
GCGGAACGATCATAAAGACGTGATGTCACATCTGGAGAAAGGAATTCACA
ACCACTTTGCCAATCTGCAGCGGGCGCAAACTGCCGCACAGTCGGGTGGC
GATTTGAATGGCACATTGGGGTCGCAATCTGGTGTGACTGGGAATAATAC
CTCCGGCACTGGGGCATCTGGGTTACCGTTCGCAAAGGTCAATAGTGTGG
TGCCTGGAAGTCCCGCAGACCAGGCAGGTCTAAGGGTTGGAGATACCGTT
CGGGAGTTCGGGAGTGCCAACTGGCTCAACCATGAACGTCTCTCCAGGGT
GGCGGAGATAGTGCAGCAAAGTGAAGGGCGCACTGTGGCGGTCAAAGTCG
TGAGGAAAGATCCGAGTTCTTCCAGCAGTATCGACTTGTCCCTGCAGCTT
GTCCCTCGCCGTGATTGGGGCGGTCGGGGCCTGTTGGGCTGTCATCTCGT
GCCGCTGTAGATGGGTTCCAACATTCATGCTCCAACAGTAGCCTCCGGCC
CTACGTCCGGAGGGGCTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGTC
GATCTCATGCAAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAG
TAGCGTCCTTGGCTCGCATGGCGTTAATATGAACACATCTCTCACTACTT
TCGATGGCTTCCCACGAGACGATATCGATGTTGCCCAAATACGCACCACT
CGAGCCCGGATTATTCGACTGCGGAACGATCATAAAGACGTGATGTCACA
TCTGGAGAAAGGAATTCACAACCACTTTGCCAATCTGCAGCGGGCGCAAA
CTGCCGCACAGTCGGGTGGCGATTTGAATGGCACATTGGGGTCGCAATCT
GGTGTGACTGGGAATAATACCTCCGGCACTGGGGCATCTGGGTTACCGTT
CGCAAAGGTCAATAGTGTGGTGCCTGGAAGTCCCGCAGACCAGGCAGGTC
TAAGGGTTGGAGATACCGTTCGGGAGTTCGGGAGTGCCAACTGGCTCAAC
CATGAACGTCTCTCCAGGGTGGCGGAGATAGTGCAGCAAAGTGAAGGGCG
CACTGTGGCGGTCAAAGTCGTGAGGAAAGATCCGAGTTCTTCCAGCAGTA
TCGACTTGTCCCTGCAGCTTGTCCCTCGCCGTGATTGGGGCGGTCGGGGC
CTGTTGGGCTGTCATCTCGTGCCGCTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036034 |
| DBxref | InterPro:IPR041489 |
| DBxref | InterPro:IPR040815 |
| DBxref | InterPro:IPR001478 |
| DBxref | PFAM:PF17820 |
| DBxref | PFAM:PF13180 |
| DBxref | PFAM:PF00595 |
| DBxref | PFAM:PF18265 |
| Product | PDZ domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:4096893..4097818 + |
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