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ASPNIDRAFT_214265-T1, ASPNIDRAFT_214265-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_214265-T1
Unique NameASPNIDRAFT_214265-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:1631246..1632603-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_214265-T1 ID=ASPNIDRAFT_214265-T1|Name=ASPNIDRAFT_214265-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1358bp|location=Sequence derived from alignment at ACJE01000016.1:1631246..1632603- (Aspergillus niger ATCC 1015)
CTCATACCTCTCATCCTACCACTCACCTTTCGCGCATCGCCATCTGCGAT
CCTCCCCACAACACTCCACCTAGATACATACACCATTAACTGCGCTTCTA
CAACATGCAGATCTTCGTTAAGACCCGTGAGTATTCCTAACCATCTCTCA
AGCTTAGCATCAGGAATCCATCATCTGACTGTTTGTTTCCATCTAGTCAC
CGGCAAGACAATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACG
TCAAGACCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGT
CTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACGCTTAGTGACTA
CAACATCCAGAAGGAGTCTACTCTCCATCTTGTCCTCCGCCTGCGTGGTG
GTATGCAGATTTGTAAGTTGTCCTGAACTCTATTTGCCACACTGTTGGCC
ACCTTCACTTGGACCATATACTGACCTCATATTAGTCGTCAAGACCCTGA
CCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGACAAT
GTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCG
TCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACT
ACAACATTCAAAAGGAATCCACCCTTCACCTCGTCCTTCGTCTGCGTGGT
GGTATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGA
AGTTGAATCTTCCGACACAATTGATAACGTTAAGACCAAGATTCAAGACA
AGGAAGGCATCCCCCCGGACCAGCAGCGTTTGATCTTCGCTGGTAAGCAG
TTGGAGGATGGCCGTACCTTGTCCGACTACAACATCCAGAAAGAATCCAC
TCTTCACCTTGTCCTTCGTCTCCGTGGTGGTATGCAGATCTTCGTGAAGA
CTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCGGATACCATT
GATAACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACCA
GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTCT
CCGATTACAACATCCAGAAGGAGAGCACTCTGCACCTGGTGCTCCGTCTC
CGTGGCGGAAACTAATGCCTTATTTTGATCTTTCTTCTTTAGCACGGCTC
ATCTACGGTTGAGTGGCCTGCATGGCGTTGGGACGGTTGTTTTCATCGGT
TTTTATGATACGGATAAATTGGGCATACCTTAGGGTCACCATCTTCCATG
GTGCCTTGCGTCATTCTTTTACCTAGGAATCAATTCAATAATCATATTCC
ACCTGATA
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Coding sequence (CDS) from alignment at ACJE01000016.1:1631246..1632603-

>ASPNIDRAFT_214265-T1 ID=ASPNIDRAFT_214265-T1|Name=ASPNIDRAFT_214265-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2754bp|location=Sequence derived from alignment at ACJE01000016.1:1631246..1632603- (Aspergillus niger ATCC 1015)
TCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCT
GACACCATCGACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCC
CCCGGACCAGCAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCC
GTACCCTGTCTGACTACAACATTCAAAAGGAATCCACCCTTCACCTCGTC
CTTCGTCTGCGTGGTGGTATGCAGATCTTCGTCAAGACTCTCACGGGAAA
GACGATCACATTGGAAGTTGAATCTTCCGACACAATTGATAACGTTAAGA
CCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTTTGATC
TTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAACAT
CCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTATGC
AGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAG
AGCTCGGATACCATTGATAACGTCAAGACTAAGATTCAAGATAAGGAGGG
CATTCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAG
ATGGACGTACGCTCTCCGATTACAACATCCAGAAGGAGAGCACTCTGCAC
CTGGTGCTCCGTCTCCGTGGCGGAAACTAATCACCGGCAAGACAATCACC
CTCGAGGTCGAGTCCAGCGATACCATCGACAACGTCAAGACCAAGATCCA
GGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGAA
AGCAGCTGGAGGATGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAG
TCTACTCTCCATCTTGTCCTCCGCCTGCGTGGTGGTATGCAGATTTATGC
AGATCTTCGTTAAGACCCTCGTCAAGACCCTGACCGGAAAGACCATCACC
CTTGAGGTGGAGTCTTCTGACACCATCGACAATGTGAAGACCAAGATTCA
GGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGAA
AGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAAAGGAA
TCCACCCTTCACCTCGTCCTTCGTCTGCGTGGTGGTATGCAGATCTTCGT
CAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCCGACA
CAATTGATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCG
GACCAGCAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTAC
CTTGTCCGACTACAACATCCAGAAAGAATCCACTCTTCACCTTGTCCTTC
GTCTCCGTGGTGGTATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACG
ATTACGCTGGAGGTGGAGAGCTCGGATACCATTGATAACGTCAAGACTAA
GATTCAAGATAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCG
CTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACAACATCCAG
AAGGAGAGCACTCTGCACCTGGTGCTCCGTCTCCGTGGCGGAAACTAATC
ACCGGCAAGACAATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAA
CGTCAAGACCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGC
GTCTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACGCTTAGTGAC
TACAACATCCAGAAGGAGTCTACTCTCCATCTTGTCCTCCGCCTGCGTGG
TGGTATGCAGATTTATGCAGATCTTCGTTAAGACCCTCGTCAAGACCCTG
ACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGACAA
TGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGC
GTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGAC
TACAACATTCAAAAGGAATCCACCCTTCACCTCGTCCTTCGTCTGCGTGG
TGGTATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGG
AAGTTGAATCTTCCGACACAATTGATAACGTTAAGACCAAGATTCAAGAC
AAGGAAGGCATCCCCCCGGACCAGCAGCGTTTGATCTTCGCTGGTAAGCA
GTTGGAGGATGGCCGTACCTTGTCCGACTACAACATCCAGAAAGAATCCA
CTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTATGCAGATCTTCGTGAAG
ACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCGGATACCAT
TGATAACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACC
AGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTC
TCCGATTACAACATCCAGAAGGAGAGCACTCTGCACCTGGTGCTCCGTCT
CCGTGGCGGAAACTAATCACCGGCAAGACAATCACCCTCGAGGTCGAGTC
CAGCGATACCATCGACAACGTCAAGACCAAGATCCAGGATAAGGAGGGCA
TCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGAT
GGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTCCATCT
TGTCCTCCGCCTGCGTGGTGGTATGCAGATTTATGCAGATCTTCGTTAAG
ACCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBI4ASPNIDRAFT_214265Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214265-T1ASPNIDRAFT_214265-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214265-T1.cdsASPNIDRAFT_214265-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214265-T1.utr3p1ASPNIDRAFT_214265-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214265-T1.exon3ASPNIDRAFT_214265-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_214265-T1.exon2ASPNIDRAFT_214265-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_214265-T1.exon1ASPNIDRAFT_214265-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214265-T1.utr5p1ASPNIDRAFT_214265-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR019954
DBxrefInterPro:IPR000626
DBxrefInterPro:IPR019956
DBxrefPFAM:PF14560
DBxrefPFAM:PF00240
DBxrefPFAM:PF13881
DBxrefPFAM:PF11976
ProductUbiquitin
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:1631246..1632603 -
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