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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000016.1:1631246..1632603- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_214265-T1 ID=ASPNIDRAFT_214265-T1|Name=ASPNIDRAFT_214265-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1358bp|location=Sequence derived from alignment at ACJE01000016.1:1631246..1632603- (Aspergillus niger ATCC 1015)
CTCATACCTCTCATCCTACCACTCACCTTTCGCGCATCGCCATCTGCGAT
CCTCCCCACAACACTCCACCTAGATACATACACCATTAACTGCGCTTCTA
CAACATGCAGATCTTCGTTAAGACCCGTGAGTATTCCTAACCATCTCTCA
AGCTTAGCATCAGGAATCCATCATCTGACTGTTTGTTTCCATCTAGTCAC
CGGCAAGACAATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACG
TCAAGACCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGT
CTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACGCTTAGTGACTA
CAACATCCAGAAGGAGTCTACTCTCCATCTTGTCCTCCGCCTGCGTGGTG
GTATGCAGATTTGTAAGTTGTCCTGAACTCTATTTGCCACACTGTTGGCC
ACCTTCACTTGGACCATATACTGACCTCATATTAGTCGTCAAGACCCTGA
CCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGACAAT
GTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCG
TCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACT
ACAACATTCAAAAGGAATCCACCCTTCACCTCGTCCTTCGTCTGCGTGGT
GGTATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGA
AGTTGAATCTTCCGACACAATTGATAACGTTAAGACCAAGATTCAAGACA
AGGAAGGCATCCCCCCGGACCAGCAGCGTTTGATCTTCGCTGGTAAGCAG
TTGGAGGATGGCCGTACCTTGTCCGACTACAACATCCAGAAAGAATCCAC
TCTTCACCTTGTCCTTCGTCTCCGTGGTGGTATGCAGATCTTCGTGAAGA
CTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCGGATACCATT
GATAACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACCA
GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTCT
CCGATTACAACATCCAGAAGGAGAGCACTCTGCACCTGGTGCTCCGTCTC
CGTGGCGGAAACTAATGCCTTATTTTGATCTTTCTTCTTTAGCACGGCTC
ATCTACGGTTGAGTGGCCTGCATGGCGTTGGGACGGTTGTTTTCATCGGT
TTTTATGATACGGATAAATTGGGCATACCTTAGGGTCACCATCTTCCATG
GTGCCTTGCGTCATTCTTTTACCTAGGAATCAATTCAATAATCATATTCC
ACCTGATA back to topCoding sequence (CDS) from alignment at ACJE01000016.1:1631246..1632603- >ASPNIDRAFT_214265-T1 ID=ASPNIDRAFT_214265-T1|Name=ASPNIDRAFT_214265-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2754bp|location=Sequence derived from alignment at ACJE01000016.1:1631246..1632603- (Aspergillus niger ATCC 1015)
TCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCT
GACACCATCGACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCC
CCCGGACCAGCAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCC
GTACCCTGTCTGACTACAACATTCAAAAGGAATCCACCCTTCACCTCGTC
CTTCGTCTGCGTGGTGGTATGCAGATCTTCGTCAAGACTCTCACGGGAAA
GACGATCACATTGGAAGTTGAATCTTCCGACACAATTGATAACGTTAAGA
CCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTTTGATC
TTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAACAT
CCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTATGC
AGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAG
AGCTCGGATACCATTGATAACGTCAAGACTAAGATTCAAGATAAGGAGGG
CATTCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAG
ATGGACGTACGCTCTCCGATTACAACATCCAGAAGGAGAGCACTCTGCAC
CTGGTGCTCCGTCTCCGTGGCGGAAACTAATCACCGGCAAGACAATCACC
CTCGAGGTCGAGTCCAGCGATACCATCGACAACGTCAAGACCAAGATCCA
GGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGAA
AGCAGCTGGAGGATGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAG
TCTACTCTCCATCTTGTCCTCCGCCTGCGTGGTGGTATGCAGATTTATGC
AGATCTTCGTTAAGACCCTCGTCAAGACCCTGACCGGAAAGACCATCACC
CTTGAGGTGGAGTCTTCTGACACCATCGACAATGTGAAGACCAAGATTCA
GGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGAA
AGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAAAGGAA
TCCACCCTTCACCTCGTCCTTCGTCTGCGTGGTGGTATGCAGATCTTCGT
CAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCCGACA
CAATTGATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCG
GACCAGCAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTAC
CTTGTCCGACTACAACATCCAGAAAGAATCCACTCTTCACCTTGTCCTTC
GTCTCCGTGGTGGTATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACG
ATTACGCTGGAGGTGGAGAGCTCGGATACCATTGATAACGTCAAGACTAA
GATTCAAGATAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCG
CTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACAACATCCAG
AAGGAGAGCACTCTGCACCTGGTGCTCCGTCTCCGTGGCGGAAACTAATC
ACCGGCAAGACAATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAA
CGTCAAGACCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGC
GTCTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACGCTTAGTGAC
TACAACATCCAGAAGGAGTCTACTCTCCATCTTGTCCTCCGCCTGCGTGG
TGGTATGCAGATTTATGCAGATCTTCGTTAAGACCCTCGTCAAGACCCTG
ACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGACAA
TGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGC
GTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGAC
TACAACATTCAAAAGGAATCCACCCTTCACCTCGTCCTTCGTCTGCGTGG
TGGTATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGG
AAGTTGAATCTTCCGACACAATTGATAACGTTAAGACCAAGATTCAAGAC
AAGGAAGGCATCCCCCCGGACCAGCAGCGTTTGATCTTCGCTGGTAAGCA
GTTGGAGGATGGCCGTACCTTGTCCGACTACAACATCCAGAAAGAATCCA
CTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTATGCAGATCTTCGTGAAG
ACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCGGATACCAT
TGATAACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACC
AGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTC
TCCGATTACAACATCCAGAAGGAGAGCACTCTGCACCTGGTGCTCCGTCT
CCGTGGCGGAAACTAATCACCGGCAAGACAATCACCCTCGAGGTCGAGTC
CAGCGATACCATCGACAACGTCAAGACCAAGATCCAGGATAAGGAGGGCA
TCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGAT
GGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTCCATCT
TGTCCTCCGCCTGCGTGGTGGTATGCAGATTTATGCAGATCTTCGTTAAG
ACCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR019954 |
| DBxref | InterPro:IPR000626 |
| DBxref | InterPro:IPR019956 |
| DBxref | PFAM:PF14560 |
| DBxref | PFAM:PF00240 |
| DBxref | PFAM:PF13881 |
| DBxref | PFAM:PF11976 |
| Product | Ubiquitin |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000016.1 | supercontig | ACJE01000016.1:1631246..1632603 - |
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