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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:505283..506618- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008727-T1 ID=CBS51388_008727-T1|Name=CBS51388_008727-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1336bp|location=Sequence derived from alignment at An14:505283..506618- (Aspergillus niger CBS 513.88) ATGAGATCCTCCCAGTCCAAGCGGAGGCAGCAGCCTCCTCCACGCAAGAA
GGCCTGCCAAAGCTGCACCAAATCAAAAGTCCGATGTGACTTGGACAGGC
CGGCTTGCTCTCGTTGCCGGTCGCTTGGTCGGACCTGCGAATATCTGACG
CATCCTCCGGTTACCAGTCCTCTGAGCGAGCCCAACTACACATCACCCAC
CGACACTACCGACAGAGAGCCAGTGTTGCCGATATACAGCACGCCACAGA
TAGCTCCGATCTCAGAGTTGCCGATACCCCTGCCATACACTTTCAGCAGT
CCGGCTTGGACCCCTCCACATCCGCCCCGCAGGCTAGTAGCCGACAGTGT
GCGTGGTGAGAGTAATGAACTCGACTTCACGGGGATTGAGCTAGTTCCGA
GTGTCAATGCAGAAAGTATCAGGGATCGATGGCTGCGACCGTATATTTTG
CCTCCACTGGGTCGTGATGAGGTCCCGAAGGCCTATCATCCGTTCACTTT
GCAGTACATCTCGAGGATTTTGAGTACATATCCCCGGTTTATGCTGAAGG
ATGGCGATGTGCCACCGATAATCCATCGGATGCAGATTGTTGGGCGCAGA
ATGCCCCGTGCTTTGGCGAATTGTTACAGTCTGGTGCGGATGTGGGAGCA
AGCTGCGGAGGGAAGTGAAACCTTGGTGGTAGAAACTGTAGAGAAAGAGA
TGGATCGACTAGCCAGCGAGGTATGACTGATCATTGTATACTATTGCTGC
AAACGAGGCAGCAGCTGACATGGAACAGGAACCGCCTAGTCTAGATGACT
TCGATCTTCTTGCTATTTTCCAGGCATACCTGATCTACTCCGTAATGTTA
TACTTCTCGCCTATAGCGGGAGCCAATGCCGTCAACGACAAAATCATGAT
AACTCTCATGGAATTGGCGTTCCGTACTGCTCGAAATGGGCTCTTCTGCA
CCGCCGAGATGTCTCATACCAGACCCAGCTGGGAGTCGTGGATCGTGGCG
GCCGCCAAGCGGCGATCGCTCTTTACAATGTACCTGTTCTGCAGCGTTTA
CAATGCCGATCGGCTTTTACCAAATTTTATTGCAGACGAGATGACTGGTG
TTTTCGCCCCTGAAGCCAAAGCATTGTGGGAAGCCACTTCTCGTGAGACA
TGGGCGAAAGAGTACGATCGGCATCTTCTTAATTGGGAAGACGGGATGCT
TGAGATCTCGGAGTTGTGGAGATCTGCGGAGACAGGAACACCGCGACGGC
GAGAACGGATTGAGCGGTGGCTACGAACAGTGGACGAATTTGGGATGACA
ATGTTTGGGGTTACTGCTCATGTGCATGGATGCTGA back to topCoding sequence (CDS) from alignment at An14:505283..506618- >CBS51388_008727-T1 ID=CBS51388_008727-T1|Name=CBS51388_008727-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2556bp|location=Sequence derived from alignment at An14:505283..506618- (Aspergillus niger CBS 513.88) GAACCGCCTAGTCTAGATGACTTCGATCTTCTTGCTATTTTCCAGGCATA CCTGATCTACTCCGTAATGTTATACTTCTCGCCTATAGCGGGAGCCAATG CCGTCAACGACAAAATCATGATAACTCTCATGGAATTGGCGTTCCGTACT GCTCGAAATGGGCTCTTCTGCACCGCCGAGATGTCTCATACCAGACCCAG CTGGGAGTCGTGGATCGTGGCGGCCGCCAAGCGGCGATCGCTCTTTACAA TGTACCTGTTCTGCAGCGTTTACAATGCCGATCGGCTTTTACCAAATTTT ATTGCAGACGAGATGACTGGTGTTTTCGCCCCTGAAGCCAAAGCATTGTG GGAAGCCACTTCTCGTGAGACATGGGCGAAAGAGTACGATCGGCATCTTC TTAATTGGGAAGACGGGATGCTTGAGATCTCGGAGTTGTGGAGATCTGCG GAGACAGGAACACCGCGACGGCGAGAACGGATTGAGCGGTGGCTACGAAC AGTGGACGAATTTGGGATGACAATGTTTGGGGTTACTGCTCATGTGCATG GATGCTGAATGAGATCCTCCCAGTCCAAGCGGAGGCAGCAGCCTCCTCCA CGCAAGAAGGCCTGCCAAAGCTGCACCAAATCAAAAGTCCGATGTGACTT GGACAGGCCGGCTTGCTCTCGTTGCCGGTCGCTTGGTCGGACCTGCGAAT ATCTGACGCATCCTCCGGTTACCAGTCCTCTGAGCGAGCCCAACTACACA TCACCCACCGACACTACCGACAGAGAGCCAGTGTTGCCGATATACAGCAC GCCACAGATAGCTCCGATCTCAGAGTTGCCGATACCCCTGCCATACACTT TCAGCAGTCCGGCTTGGACCCCTCCACATCCGCCCCGCAGGCTAGTAGCC GACAGTGTGCGTGGTGAGAGTAATGAACTCGACTTCACGGGGATTGAGCT AGTTCCGAGTGTCAATGCAGAAAGTATCAGGGATCGATGGCTGCGACCGT ATATTTTGCCTCCACTGGGTCGTGATGAGGTCCCGAAGGCCTATCATCCG TTCACTTTGCAGTACATCTCGAGGATTTTGAGTACATATCCCCGGTTTAT GCTGAAGGATGGCGATGTGCCACCGATAATCCATCGGATGCAGATTGTTG GGCGCAGAATGCCCCGTGCTTTGGCGAATTGTTACAGTCTGGTGCGGATG TGGGAGCAAGCTGCGGAGGGAAGTGAAACCTTGGTGGTAGAAACTGTAGA GAAAGAGATGGATCGACTAGCCAGCGAGGAACCGCCTAGTCTAGATGACT TCGATCTTCTTGCTATTTTCCAGGCATACCTGATCTACTCCGTAATGTTA TACTTCTCGCCTATAGCGGGAGCCAATGCCGTCAACGACAAAATCATGAT AACTCTCATGGAATTGGCGTTCCGTACTGCTCGAAATGGGCTCTTCTGCA CCGCCGAGATGTCTCATACCAGACCCAGCTGGGAGTCGTGGATCGTGGCG GCCGCCAAGCGGCGATCGCTCTTTACAATGTACCTGTTCTGCAGCGTTTA CAATGCCGATCGGCTTTTACCAAATTTTATTGCAGACGAGATGACTGGTG TTTTCGCCCCTGAAGCCAAAGCATTGTGGGAAGCCACTTCTCGTGAGACA TGGGCGAAAGAGTACGATCGGCATCTTCTTAATTGGGAAGACGGGATGCT TGAGATCTCGGAGTTGTGGAGATCTGCGGAGACAGGAACACCGCGACGGC GAGAACGGATTGAGCGGTGGCTACGAACAGTGGACGAATTTGGGATGACA ATGTTTGGGGTTACTGCTCATGTGCATGGATGCTGAATGAGATCCTCCCA GTCCAAGCGGAGGCAGCAGCCTCCTCCACGCAAGAAGGCCTGCCAAAGCT GCACCAAATCAAAAGTCCGATGTGACTTGGACAGGCCGGCTTGCTCTCGT TGCCGGTCGCTTGGTCGGACCTGCGAATATCTGACGCATCCTCCGGTTAC CAGTCCTCTGAGCGAGCCCAACTACACATCACCCACCGACACTACCGACA GAGAGCCAGTGTTGCCGATATACAGCACGCCACAGATAGCTCCGATCTCA GAGTTGCCGATACCCCTGCCATACACTTTCAGCAGTCCGGCTTGGACCCC TCCACATCCGCCCCGCAGGCTAGTAGCCGACAGTGTGCGTGGTGAGAGTA ATGAACTCGACTTCACGGGGATTGAGCTAGTTCCGAGTGTCAATGCAGAA AGTATCAGGGATCGATGGCTGCGACCGTATATTTTGCCTCCACTGGGTCG TGATGAGGTCCCGAAGGCCTATCATCCGTTCACTTTGCAGTACATCTCGA GGATTTTGAGTACATATCCCCGGTTTATGCTGAAGGATGGCGATGTGCCA CCGATAATCCATCGGATGCAGATTGTTGGGCGCAGAATGCCCCGTGCTTT GGCGAATTGTTACAGTCTGGTGCGGATGTGGGAGCAAGCTGCGGAGGGAA GTGAAACCTTGGTGGTAGAAACTGTAGAGAAAGAGATGGATCGACTAGCC AGCGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | antiSMASH:Cluster_14.2 |
Note | antiSMASH:Cluster_14.1 |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR001138 |
DBxref | PFAM:PF00172 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
An14 | supercontig | An14:505283..506618 - |
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