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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:505283..506618- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008727-T1 ID=CBS51388_008727-T1|Name=CBS51388_008727-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1336bp|location=Sequence derived from alignment at An14:505283..506618- (Aspergillus niger CBS 513.88)
ATGAGATCCTCCCAGTCCAAGCGGAGGCAGCAGCCTCCTCCACGCAAGAA
GGCCTGCCAAAGCTGCACCAAATCAAAAGTCCGATGTGACTTGGACAGGC
CGGCTTGCTCTCGTTGCCGGTCGCTTGGTCGGACCTGCGAATATCTGACG
CATCCTCCGGTTACCAGTCCTCTGAGCGAGCCCAACTACACATCACCCAC
CGACACTACCGACAGAGAGCCAGTGTTGCCGATATACAGCACGCCACAGA
TAGCTCCGATCTCAGAGTTGCCGATACCCCTGCCATACACTTTCAGCAGT
CCGGCTTGGACCCCTCCACATCCGCCCCGCAGGCTAGTAGCCGACAGTGT
GCGTGGTGAGAGTAATGAACTCGACTTCACGGGGATTGAGCTAGTTCCGA
GTGTCAATGCAGAAAGTATCAGGGATCGATGGCTGCGACCGTATATTTTG
CCTCCACTGGGTCGTGATGAGGTCCCGAAGGCCTATCATCCGTTCACTTT
GCAGTACATCTCGAGGATTTTGAGTACATATCCCCGGTTTATGCTGAAGG
ATGGCGATGTGCCACCGATAATCCATCGGATGCAGATTGTTGGGCGCAGA
ATGCCCCGTGCTTTGGCGAATTGTTACAGTCTGGTGCGGATGTGGGAGCA
AGCTGCGGAGGGAAGTGAAACCTTGGTGGTAGAAACTGTAGAGAAAGAGA
TGGATCGACTAGCCAGCGAGGTATGACTGATCATTGTATACTATTGCTGC
AAACGAGGCAGCAGCTGACATGGAACAGGAACCGCCTAGTCTAGATGACT
TCGATCTTCTTGCTATTTTCCAGGCATACCTGATCTACTCCGTAATGTTA
TACTTCTCGCCTATAGCGGGAGCCAATGCCGTCAACGACAAAATCATGAT
AACTCTCATGGAATTGGCGTTCCGTACTGCTCGAAATGGGCTCTTCTGCA
CCGCCGAGATGTCTCATACCAGACCCAGCTGGGAGTCGTGGATCGTGGCG
GCCGCCAAGCGGCGATCGCTCTTTACAATGTACCTGTTCTGCAGCGTTTA
CAATGCCGATCGGCTTTTACCAAATTTTATTGCAGACGAGATGACTGGTG
TTTTCGCCCCTGAAGCCAAAGCATTGTGGGAAGCCACTTCTCGTGAGACA
TGGGCGAAAGAGTACGATCGGCATCTTCTTAATTGGGAAGACGGGATGCT
TGAGATCTCGGAGTTGTGGAGATCTGCGGAGACAGGAACACCGCGACGGC
GAGAACGGATTGAGCGGTGGCTACGAACAGTGGACGAATTTGGGATGACA
ATGTTTGGGGTTACTGCTCATGTGCATGGATGCTGA back to topCoding sequence (CDS) from alignment at An14:505283..506618- >CBS51388_008727-T1 ID=CBS51388_008727-T1|Name=CBS51388_008727-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2556bp|location=Sequence derived from alignment at An14:505283..506618- (Aspergillus niger CBS 513.88)
GAACCGCCTAGTCTAGATGACTTCGATCTTCTTGCTATTTTCCAGGCATA
CCTGATCTACTCCGTAATGTTATACTTCTCGCCTATAGCGGGAGCCAATG
CCGTCAACGACAAAATCATGATAACTCTCATGGAATTGGCGTTCCGTACT
GCTCGAAATGGGCTCTTCTGCACCGCCGAGATGTCTCATACCAGACCCAG
CTGGGAGTCGTGGATCGTGGCGGCCGCCAAGCGGCGATCGCTCTTTACAA
TGTACCTGTTCTGCAGCGTTTACAATGCCGATCGGCTTTTACCAAATTTT
ATTGCAGACGAGATGACTGGTGTTTTCGCCCCTGAAGCCAAAGCATTGTG
GGAAGCCACTTCTCGTGAGACATGGGCGAAAGAGTACGATCGGCATCTTC
TTAATTGGGAAGACGGGATGCTTGAGATCTCGGAGTTGTGGAGATCTGCG
GAGACAGGAACACCGCGACGGCGAGAACGGATTGAGCGGTGGCTACGAAC
AGTGGACGAATTTGGGATGACAATGTTTGGGGTTACTGCTCATGTGCATG
GATGCTGAATGAGATCCTCCCAGTCCAAGCGGAGGCAGCAGCCTCCTCCA
CGCAAGAAGGCCTGCCAAAGCTGCACCAAATCAAAAGTCCGATGTGACTT
GGACAGGCCGGCTTGCTCTCGTTGCCGGTCGCTTGGTCGGACCTGCGAAT
ATCTGACGCATCCTCCGGTTACCAGTCCTCTGAGCGAGCCCAACTACACA
TCACCCACCGACACTACCGACAGAGAGCCAGTGTTGCCGATATACAGCAC
GCCACAGATAGCTCCGATCTCAGAGTTGCCGATACCCCTGCCATACACTT
TCAGCAGTCCGGCTTGGACCCCTCCACATCCGCCCCGCAGGCTAGTAGCC
GACAGTGTGCGTGGTGAGAGTAATGAACTCGACTTCACGGGGATTGAGCT
AGTTCCGAGTGTCAATGCAGAAAGTATCAGGGATCGATGGCTGCGACCGT
ATATTTTGCCTCCACTGGGTCGTGATGAGGTCCCGAAGGCCTATCATCCG
TTCACTTTGCAGTACATCTCGAGGATTTTGAGTACATATCCCCGGTTTAT
GCTGAAGGATGGCGATGTGCCACCGATAATCCATCGGATGCAGATTGTTG
GGCGCAGAATGCCCCGTGCTTTGGCGAATTGTTACAGTCTGGTGCGGATG
TGGGAGCAAGCTGCGGAGGGAAGTGAAACCTTGGTGGTAGAAACTGTAGA
GAAAGAGATGGATCGACTAGCCAGCGAGGAACCGCCTAGTCTAGATGACT
TCGATCTTCTTGCTATTTTCCAGGCATACCTGATCTACTCCGTAATGTTA
TACTTCTCGCCTATAGCGGGAGCCAATGCCGTCAACGACAAAATCATGAT
AACTCTCATGGAATTGGCGTTCCGTACTGCTCGAAATGGGCTCTTCTGCA
CCGCCGAGATGTCTCATACCAGACCCAGCTGGGAGTCGTGGATCGTGGCG
GCCGCCAAGCGGCGATCGCTCTTTACAATGTACCTGTTCTGCAGCGTTTA
CAATGCCGATCGGCTTTTACCAAATTTTATTGCAGACGAGATGACTGGTG
TTTTCGCCCCTGAAGCCAAAGCATTGTGGGAAGCCACTTCTCGTGAGACA
TGGGCGAAAGAGTACGATCGGCATCTTCTTAATTGGGAAGACGGGATGCT
TGAGATCTCGGAGTTGTGGAGATCTGCGGAGACAGGAACACCGCGACGGC
GAGAACGGATTGAGCGGTGGCTACGAACAGTGGACGAATTTGGGATGACA
ATGTTTGGGGTTACTGCTCATGTGCATGGATGCTGAATGAGATCCTCCCA
GTCCAAGCGGAGGCAGCAGCCTCCTCCACGCAAGAAGGCCTGCCAAAGCT
GCACCAAATCAAAAGTCCGATGTGACTTGGACAGGCCGGCTTGCTCTCGT
TGCCGGTCGCTTGGTCGGACCTGCGAATATCTGACGCATCCTCCGGTTAC
CAGTCCTCTGAGCGAGCCCAACTACACATCACCCACCGACACTACCGACA
GAGAGCCAGTGTTGCCGATATACAGCACGCCACAGATAGCTCCGATCTCA
GAGTTGCCGATACCCCTGCCATACACTTTCAGCAGTCCGGCTTGGACCCC
TCCACATCCGCCCCGCAGGCTAGTAGCCGACAGTGTGCGTGGTGAGAGTA
ATGAACTCGACTTCACGGGGATTGAGCTAGTTCCGAGTGTCAATGCAGAA
AGTATCAGGGATCGATGGCTGCGACCGTATATTTTGCCTCCACTGGGTCG
TGATGAGGTCCCGAAGGCCTATCATCCGTTCACTTTGCAGTACATCTCGA
GGATTTTGAGTACATATCCCCGGTTTATGCTGAAGGATGGCGATGTGCCA
CCGATAATCCATCGGATGCAGATTGTTGGGCGCAGAATGCCCCGTGCTTT
GGCGAATTGTTACAGTCTGGTGCGGATGTGGGAGCAAGCTGCGGAGGGAA
GTGAAACCTTGGTGGTAGAAACTGTAGAGAAAGAGATGGATCGACTAGCC
AGCGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_14.2 |
| Note | antiSMASH:Cluster_14.1 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An14 | supercontig | An14:505283..506618 - |
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