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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:2598778..2600487+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_20315-T1 ID=CAN33_20315-T1|Name=CAN33_20315-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1710bp|location=Sequence derived from alignment at NKJJ01000011.1:2598778..2600487+ (Aspergillus niger FDAARGOS_311)
ATGCGTCTCGTTCGAGATTGCCTGTATGGGGGGTTATTCCTTAACACGGC
GCTCTTCTCCCAGCTCTCCCACGCCATCGATATCGATATCAGCAGTACCA
GTATGCCTTCCCCCACTTCTTCAATCTCTTTCCCATTATATACACCACTG
TCTCGGCCCTTGCTTTATTCCGTCATCCTTCTCCTCTCCTACATACTTGG
ACGCAGTTGCGCCACTATATCTAAGACTCCATGCCTTCCATTCCAACGAC
ATACATAAATACCATGAATTGACAACTGATACACATTTTTATTGTCCGTA
TAGGTTCAATTAAAGATGCCGCCAGTAAGACGGCCTACGGGTCCATGACC
TGGTATCATGGAAACGAAACCGGTCAGATTCCCGGTGCTTTCCCTAGCAA
GTGGTGGGAGGGTAGCGCGCTTTTCACAAGTTTGCTCCTCTACTGGTATT
ACACTGGAGACAGTACCTACAACGACGAGGTCCGTCAGGGTATGCAATGG
CAGGCGGGTGACTGCGATTACATGCCCGCCAATTACAGTAGTTACCTGGT
AAGTGACCTGACCACACCCATCCCCCCTGAACTTGGACAATAGTCTGACT
CTCGTCGCTGTTCACTAGGGTAACGACGATCAAATGTTCTGGGGTCTTGC
CGCCATCACCGCTGCCGAGATCGAATTCGCCGACAGCTCCTCCGGATATT
CCTGGCTCGCTTTGGCCCAGGGTGTTTACAACACTCAGATCGACCGATGG
GATGATTCGACATGTGGCGGCGGTTTGCGCTGGCAGATCTACCCTTACGA
GGCCGGTTACGCCATGAAGAACTCCATCTCGAACGGAGGTTTGTTCCAAC
TCGCCGCCCGCCTGGCCCGCTACACCTCAAACGACACATACGCCGACTGG
GCAGAGAAGATCTTCGATTGGTGTGCCTCGACTCCGTTGCTAAACAACGA
GACTTGGAACGTGGCCGACTCCACCGATGTCGATAACAGCTGCTCCACCC
AAGGCAACAACCAGTGGTCTTACAACTACGGCGTGTTCTTGACGGGAGCC
GCGTACATGTACAACTATGTGAGTGATTCCGACCCCCTTGAGGTACGAAG
GAAACATGTGCTGATTTGACGCCATTCACAGACCGGCAAGGCCAAGTGGA
AGACTGCGGCGGAGGGCCTCTTGAACGTCACGCTCGACACCTTTTTCCCG
GCGAAGTATGGTGGAAACATCATGTCCGAAATTCTCTGTGAGCCGACCGA
AGTGTGCAATGACAACGAAATTCTGTTCAAGGGTCTCGTCACCGGATGGC
TTGGACTTGTGGCCCTAGTGATGCCGTCGACGTATGATAGCATTTTGCCA
AAGCTGCAGGGGTCTGCCGAAGCTGCCGCAGCCTCCTGCAGCGGAATGAG
CAACAACACTTGTGGTGTGCGCTGGTGGCCCAAGAAGTGGGATGGATGGA
ACGGAATGGAGGAGGAAATCGCCGTCACCAACGTTCTATCCTCCGCGTTG
GTCAACACGAAGAAAACCGCCCCTGTGACCTCCAGCACCGGAGGCAATAG
TAGTAGTGATCCGAACGCAGGTACGGGCGACAACACCGGGAGCAGCGGCA
GTACCGAATCGAAGATCACCACGGGCGACAAGGCGGGTGCCTCCATCCTG
ACCATTGCCTTTGTGGGCATGTGGGGAGGTATGATCGCTTGGATGGTCAT
TGGCGGTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:2598778..2600487+ >CAN33_20315-T1 ID=CAN33_20315-T1|Name=CAN33_20315-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5496bp|location=Sequence derived from alignment at NKJJ01000011.1:2598778..2600487+ (Aspergillus niger FDAARGOS_311)
ATGCGTCTCGTTCGAGATTGCCTGTATGGGGGGTTATTCCTTAACACGGC
GCTCTTCTCCCAGCTCTCCCACGCCATCGATATCGATATCAGCAGTACCA
GTTCAATTAAAGATGCCGCCAGTAAGACGGCCTACGGGTCCATGACCTGG
TATCATGGAAACGAAACCGGTCAGATTCCCGGTGCTTTCCCTAGCAAGTG
GTGGGAGGGTAGCGCGCTTTTCACAAGTTTGCTCCTCTACTGGTATTACA
CTGGAGACAGTACCTACAACGACGAGGTCCGTCAGGGTATGCAATGGCAG
GCGGGTGACTGCGATTACATGCCCGCCAATTACAGTAGTTACCTGGGTAA
CGACGATCAAATGTTCTGGGGTCTTGCCGCCATCACCGCTGCCGAGATCG
AATTCGCCGACAGCTCCTCCGGATATTCCTGGCTCGCTTTGGCCCAGGGT
GTTTACAACACTCAGATCGACCGATGGGATGATTCGACATGTGGCGGCGG
TTTGCGCTGGCAGATCTACCCTTACGAGGCCGGTTACGCCATGAAGAACT
CCATCTCGAACGGAGGTTTGTTCCAACTCGCCGCCCGCCTGGCCCGCTAC
ACCTCAAACGACACATACGCCGACTGGGCAGAGAAGATCTTCGATTGGTG
TGCCTCGACTCCGTTGCTAAACAACGAGACTTGGAACGTGGCCGACTCCA
CCGATGTCGATAACAGCTGCTCCACCCAAGGCAACAACCAGTGGTCTTAC
AACTACGGCGTGTTCTTGACGGGAGCCGCGTACATGTACAACTATACCGG
CAAGGCCAAGTGGAAGACTGCGGCGGAGGGCCTCTTGAACGTCACGCTCG
ACACCTTTTTCCCGGCGAAGTATGGTGGAAACATCATGTCCGAAATTCTC
TGTGAGCCGACCGAAGTGTGCAATGACAACGAAATTCTGTTCAAGGGTCT
CGTCACCGGATGGCTTGGACTTGTGGCCCTAGTGATGCCGTCGACGTATG
ATAGCATTTTGCCAAAGCTGCAGGGGTCTGCCGAAGCTGCCGCAGCCTCC
TGCAGCGGAATGAGCAACAACACTTGTGGTGTGCGCTGGTGGCCCAAGAA
GTGGGATGGATGGAACGGAATGGAGGAGGAAATCGCCGTCACCAACGTTC
TATCCTCCGCGTTGGTCAACACGAAGAAAACCGCCCCTGTGACCTCCAGC
ACCGGAGGCAATAGTAGTAGTGATCCGAACGCAGGTACGGGCGACAACAC
CGGGAGCAGCGGCAGTACCGAATCGAAGATCACCACGGGCGACAAGGCGG
GTGCCTCCATCCTGACCATTGCCTTTGTGGGCATGTGGGGAGGTATGATC
GCTTGGATGGTCATTGGCGGTTGAATGCGTCTCGTTCGAGATTGCCTGTA
TGGGGGGTTATTCCTTAACACGGCGCTCTTCTCCCAGCTCTCCCACGCCA
TCGATATCGATATCAGCAGTACCAGTTCAATTAAAGATGCCGCCAGTAAG
ACGGCCTACGGGTCCATGACCTGGTATCATGGAAACGAAACCGGTCAGAT
TCCCGGTGCTTTCCCTAGCAAGTGGTGGGAGGGTAGCGCGCTTTTCACAA
GTTTGCTCCTCTACTGGTATTACACTGGAGACAGTACCTACAACGACGAG
GTCCGTCAGGGTATGCAATGGCAGGCGGGTGACTGCGATTACATGCCCGC
CAATTACAGTAGTTACCTGGGTAACGACGATCAAATGTTCTGGGGTCTTG
CCGCCATCACCGCTGCCGAGATCGAATTCGCCGACAGCTCCTCCGGATAT
TCCTGGCTCGCTTTGGCCCAGGGTGTTTACAACACTCAGATCGACCGATG
GGATGATTCGACATGTGGCGGCGGTTTGCGCTGGCAGATCTACCCTTACG
AGGCCGGTTACGCCATGAAGAACTCCATCTCGAACGGAGGTTTGTTCCAA
CTCGCCGCCCGCCTGGCCCGCTACACCTCAAACGACACATACGCCGACTG
GGCAGAGAAGATCTTCGATTGGTGTGCCTCGACTCCGTTGCTAAACAACG
AGACTTGGAACGTGGCCGACTCCACCGATGTCGATAACAGCTGCTCCACC
CAAGGCAACAACCAGTGGTCTTACAACTACGGCGTGTTCTTGACGGGAGC
CGCGTACATGTACAACTATACCGGCAAGGCCAAGTGGAAGACTGCGGCGG
AGGGCCTCTTGAACGTCACGCTCGACACCTTTTTCCCGGCGAAGTATGGT
GGAAACATCATGTCCGAAATTCTCTGTGAGCCGACCGAAGTGTGCAATGA
CAACGAAATTCTGTTCAAGGGTCTCGTCACCGGATGGCTTGGACTTGTGG
CCCTAGTGATGCCGTCGACGTATGATAGCATTTTGCCAAAGCTGCAGGGG
TCTGCCGAAGCTGCCGCAGCCTCCTGCAGCGGAATGAGCAACAACACTTG
TGGTGTGCGCTGGTGGCCCAAGAAGTGGGATGGATGGAACGGAATGGAGG
AGGAAATCGCCGTCACCAACGTTCTATCCTCCGCGTTGGTCAACACGAAG
AAAACCGCCCCTGTGACCTCCAGCACCGGAGGCAATAGTAGTAGTGATCC
GAACGCAGGTACGGGCGACAACACCGGGAGCAGCGGCAGTACCGAATCGA
AGATCACCACGGGCGACAAGGCGGGTGCCTCCATCCTGACCATTGCCTTT
GTGGGCATGTGGGGAGGTATGATCGCTTGGATGGTCATTGGCGGTTGAAT
GCGTCTCGTTCGAGATTGCCTGTATGGGGGGTTATTCCTTAACACGGCGC
TCTTCTCCCAGCTCTCCCACGCCATCGATATCGATATCAGCAGTACCAGT
TCAATTAAAGATGCCGCCAGTAAGACGGCCTACGGGTCCATGACCTGGTA
TCATGGAAACGAAACCGGTCAGATTCCCGGTGCTTTCCCTAGCAAGTGGT
GGGAGGGTAGCGCGCTTTTCACAAGTTTGCTCCTCTACTGGTATTACACT
GGAGACAGTACCTACAACGACGAGGTCCGTCAGGGTATGCAATGGCAGGC
GGGTGACTGCGATTACATGCCCGCCAATTACAGTAGTTACCTGGGTAACG
ACGATCAAATGTTCTGGGGTCTTGCCGCCATCACCGCTGCCGAGATCGAA
TTCGCCGACAGCTCCTCCGGATATTCCTGGCTCGCTTTGGCCCAGGGTGT
TTACAACACTCAGATCGACCGATGGGATGATTCGACATGTGGCGGCGGTT
TGCGCTGGCAGATCTACCCTTACGAGGCCGGTTACGCCATGAAGAACTCC
ATCTCGAACGGAGGTTTGTTCCAACTCGCCGCCCGCCTGGCCCGCTACAC
CTCAAACGACACATACGCCGACTGGGCAGAGAAGATCTTCGATTGGTGTG
CCTCGACTCCGTTGCTAAACAACGAGACTTGGAACGTGGCCGACTCCACC
GATGTCGATAACAGCTGCTCCACCCAAGGCAACAACCAGTGGTCTTACAA
CTACGGCGTGTTCTTGACGGGAGCCGCGTACATGTACAACTATACCGGCA
AGGCCAAGTGGAAGACTGCGGCGGAGGGCCTCTTGAACGTCACGCTCGAC
ACCTTTTTCCCGGCGAAGTATGGTGGAAACATCATGTCCGAAATTCTCTG
TGAGCCGACCGAAGTGTGCAATGACAACGAAATTCTGTTCAAGGGTCTCG
TCACCGGATGGCTTGGACTTGTGGCCCTAGTGATGCCGTCGACGTATGAT
AGCATTTTGCCAAAGCTGCAGGGGTCTGCCGAAGCTGCCGCAGCCTCCTG
CAGCGGAATGAGCAACAACACTTGTGGTGTGCGCTGGTGGCCCAAGAAGT
GGGATGGATGGAACGGAATGGAGGAGGAAATCGCCGTCACCAACGTTCTA
TCCTCCGCGTTGGTCAACACGAAGAAAACCGCCCCTGTGACCTCCAGCAC
CGGAGGCAATAGTAGTAGTGATCCGAACGCAGGTACGGGCGACAACACCG
GGAGCAGCGGCAGTACCGAATCGAAGATCACCACGGGCGACAAGGCGGGT
GCCTCCATCCTGACCATTGCCTTTGTGGGCATGTGGGGAGGTATGATCGC
TTGGATGGTCATTGGCGGTTGAATGCGTCTCGTTCGAGATTGCCTGTATG
GGGGGTTATTCCTTAACACGGCGCTCTTCTCCCAGCTCTCCCACGCCATC
GATATCGATATCAGCAGTACCAGTTCAATTAAAGATGCCGCCAGTAAGAC
GGCCTACGGGTCCATGACCTGGTATCATGGAAACGAAACCGGTCAGATTC
CCGGTGCTTTCCCTAGCAAGTGGTGGGAGGGTAGCGCGCTTTTCACAAGT
TTGCTCCTCTACTGGTATTACACTGGAGACAGTACCTACAACGACGAGGT
CCGTCAGGGTATGCAATGGCAGGCGGGTGACTGCGATTACATGCCCGCCA
ATTACAGTAGTTACCTGGGTAACGACGATCAAATGTTCTGGGGTCTTGCC
GCCATCACCGCTGCCGAGATCGAATTCGCCGACAGCTCCTCCGGATATTC
CTGGCTCGCTTTGGCCCAGGGTGTTTACAACACTCAGATCGACCGATGGG
ATGATTCGACATGTGGCGGCGGTTTGCGCTGGCAGATCTACCCTTACGAG
GCCGGTTACGCCATGAAGAACTCCATCTCGAACGGAGGTTTGTTCCAACT
CGCCGCCCGCCTGGCCCGCTACACCTCAAACGACACATACGCCGACTGGG
CAGAGAAGATCTTCGATTGGTGTGCCTCGACTCCGTTGCTAAACAACGAG
ACTTGGAACGTGGCCGACTCCACCGATGTCGATAACAGCTGCTCCACCCA
AGGCAACAACCAGTGGTCTTACAACTACGGCGTGTTCTTGACGGGAGCCG
CGTACATGTACAACTATACCGGCAAGGCCAAGTGGAAGACTGCGGCGGAG
GGCCTCTTGAACGTCACGCTCGACACCTTTTTCCCGGCGAAGTATGGTGG
AAACATCATGTCCGAAATTCTCTGTGAGCCGACCGAAGTGTGCAATGACA
ACGAAATTCTGTTCAAGGGTCTCGTCACCGGATGGCTTGGACTTGTGGCC
CTAGTGATGCCGTCGACGTATGATAGCATTTTGCCAAAGCTGCAGGGGTC
TGCCGAAGCTGCCGCAGCCTCCTGCAGCGGAATGAGCAACAACACTTGTG
GTGTGCGCTGGTGGCCCAAGAAGTGGGATGGATGGAACGGAATGGAGGAG
GAAATCGCCGTCACCAACGTTCTATCCTCCGCGTTGGTCAACACGAAGAA
AACCGCCCCTGTGACCTCCAGCACCGGAGGCAATAGTAGTAGTGATCCGA
ACGCAGGTACGGGCGACAACACCGGGAGCAGCGGCAGTACCGAATCGAAG
ATCACCACGGGCGACAAGGCGGGTGCCTCCATCCTGACCATTGCCTTTGT
GGGCATGTGGGGAGGTATGATCGCTTGGATGGTCATTGGCGGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016052 | carbohydrate catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0008496 | mannan endo-1,6-alpha-mannosidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH76 |
| DBxref | InterPro:IPR008928 |
| DBxref | InterPro:IPR014480 |
| DBxref | InterPro:IPR005198 |
| DBxref | PFAM:PF03663 |
| Product | Glycosyl hydrolase family 76 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:2598778..2600487 + |
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