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CAN33_20315-T1, CAN33_20315-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20315-T1
Unique NameCAN33_20315-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2598778..2600487+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20315-T1 ID=CAN33_20315-T1|Name=CAN33_20315-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1710bp|location=Sequence derived from alignment at NKJJ01000011.1:2598778..2600487+ (Aspergillus niger FDAARGOS_311)
ATGCGTCTCGTTCGAGATTGCCTGTATGGGGGGTTATTCCTTAACACGGC
GCTCTTCTCCCAGCTCTCCCACGCCATCGATATCGATATCAGCAGTACCA
GTATGCCTTCCCCCACTTCTTCAATCTCTTTCCCATTATATACACCACTG
TCTCGGCCCTTGCTTTATTCCGTCATCCTTCTCCTCTCCTACATACTTGG
ACGCAGTTGCGCCACTATATCTAAGACTCCATGCCTTCCATTCCAACGAC
ATACATAAATACCATGAATTGACAACTGATACACATTTTTATTGTCCGTA
TAGGTTCAATTAAAGATGCCGCCAGTAAGACGGCCTACGGGTCCATGACC
TGGTATCATGGAAACGAAACCGGTCAGATTCCCGGTGCTTTCCCTAGCAA
GTGGTGGGAGGGTAGCGCGCTTTTCACAAGTTTGCTCCTCTACTGGTATT
ACACTGGAGACAGTACCTACAACGACGAGGTCCGTCAGGGTATGCAATGG
CAGGCGGGTGACTGCGATTACATGCCCGCCAATTACAGTAGTTACCTGGT
AAGTGACCTGACCACACCCATCCCCCCTGAACTTGGACAATAGTCTGACT
CTCGTCGCTGTTCACTAGGGTAACGACGATCAAATGTTCTGGGGTCTTGC
CGCCATCACCGCTGCCGAGATCGAATTCGCCGACAGCTCCTCCGGATATT
CCTGGCTCGCTTTGGCCCAGGGTGTTTACAACACTCAGATCGACCGATGG
GATGATTCGACATGTGGCGGCGGTTTGCGCTGGCAGATCTACCCTTACGA
GGCCGGTTACGCCATGAAGAACTCCATCTCGAACGGAGGTTTGTTCCAAC
TCGCCGCCCGCCTGGCCCGCTACACCTCAAACGACACATACGCCGACTGG
GCAGAGAAGATCTTCGATTGGTGTGCCTCGACTCCGTTGCTAAACAACGA
GACTTGGAACGTGGCCGACTCCACCGATGTCGATAACAGCTGCTCCACCC
AAGGCAACAACCAGTGGTCTTACAACTACGGCGTGTTCTTGACGGGAGCC
GCGTACATGTACAACTATGTGAGTGATTCCGACCCCCTTGAGGTACGAAG
GAAACATGTGCTGATTTGACGCCATTCACAGACCGGCAAGGCCAAGTGGA
AGACTGCGGCGGAGGGCCTCTTGAACGTCACGCTCGACACCTTTTTCCCG
GCGAAGTATGGTGGAAACATCATGTCCGAAATTCTCTGTGAGCCGACCGA
AGTGTGCAATGACAACGAAATTCTGTTCAAGGGTCTCGTCACCGGATGGC
TTGGACTTGTGGCCCTAGTGATGCCGTCGACGTATGATAGCATTTTGCCA
AAGCTGCAGGGGTCTGCCGAAGCTGCCGCAGCCTCCTGCAGCGGAATGAG
CAACAACACTTGTGGTGTGCGCTGGTGGCCCAAGAAGTGGGATGGATGGA
ACGGAATGGAGGAGGAAATCGCCGTCACCAACGTTCTATCCTCCGCGTTG
GTCAACACGAAGAAAACCGCCCCTGTGACCTCCAGCACCGGAGGCAATAG
TAGTAGTGATCCGAACGCAGGTACGGGCGACAACACCGGGAGCAGCGGCA
GTACCGAATCGAAGATCACCACGGGCGACAAGGCGGGTGCCTCCATCCTG
ACCATTGCCTTTGTGGGCATGTGGGGAGGTATGATCGCTTGGATGGTCAT
TGGCGGTTGA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:2598778..2600487+

>CAN33_20315-T1 ID=CAN33_20315-T1|Name=CAN33_20315-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5496bp|location=Sequence derived from alignment at NKJJ01000011.1:2598778..2600487+ (Aspergillus niger FDAARGOS_311)
ATGCGTCTCGTTCGAGATTGCCTGTATGGGGGGTTATTCCTTAACACGGC
GCTCTTCTCCCAGCTCTCCCACGCCATCGATATCGATATCAGCAGTACCA
GTTCAATTAAAGATGCCGCCAGTAAGACGGCCTACGGGTCCATGACCTGG
TATCATGGAAACGAAACCGGTCAGATTCCCGGTGCTTTCCCTAGCAAGTG
GTGGGAGGGTAGCGCGCTTTTCACAAGTTTGCTCCTCTACTGGTATTACA
CTGGAGACAGTACCTACAACGACGAGGTCCGTCAGGGTATGCAATGGCAG
GCGGGTGACTGCGATTACATGCCCGCCAATTACAGTAGTTACCTGGGTAA
CGACGATCAAATGTTCTGGGGTCTTGCCGCCATCACCGCTGCCGAGATCG
AATTCGCCGACAGCTCCTCCGGATATTCCTGGCTCGCTTTGGCCCAGGGT
GTTTACAACACTCAGATCGACCGATGGGATGATTCGACATGTGGCGGCGG
TTTGCGCTGGCAGATCTACCCTTACGAGGCCGGTTACGCCATGAAGAACT
CCATCTCGAACGGAGGTTTGTTCCAACTCGCCGCCCGCCTGGCCCGCTAC
ACCTCAAACGACACATACGCCGACTGGGCAGAGAAGATCTTCGATTGGTG
TGCCTCGACTCCGTTGCTAAACAACGAGACTTGGAACGTGGCCGACTCCA
CCGATGTCGATAACAGCTGCTCCACCCAAGGCAACAACCAGTGGTCTTAC
AACTACGGCGTGTTCTTGACGGGAGCCGCGTACATGTACAACTATACCGG
CAAGGCCAAGTGGAAGACTGCGGCGGAGGGCCTCTTGAACGTCACGCTCG
ACACCTTTTTCCCGGCGAAGTATGGTGGAAACATCATGTCCGAAATTCTC
TGTGAGCCGACCGAAGTGTGCAATGACAACGAAATTCTGTTCAAGGGTCT
CGTCACCGGATGGCTTGGACTTGTGGCCCTAGTGATGCCGTCGACGTATG
ATAGCATTTTGCCAAAGCTGCAGGGGTCTGCCGAAGCTGCCGCAGCCTCC
TGCAGCGGAATGAGCAACAACACTTGTGGTGTGCGCTGGTGGCCCAAGAA
GTGGGATGGATGGAACGGAATGGAGGAGGAAATCGCCGTCACCAACGTTC
TATCCTCCGCGTTGGTCAACACGAAGAAAACCGCCCCTGTGACCTCCAGC
ACCGGAGGCAATAGTAGTAGTGATCCGAACGCAGGTACGGGCGACAACAC
CGGGAGCAGCGGCAGTACCGAATCGAAGATCACCACGGGCGACAAGGCGG
GTGCCTCCATCCTGACCATTGCCTTTGTGGGCATGTGGGGAGGTATGATC
GCTTGGATGGTCATTGGCGGTTGAATGCGTCTCGTTCGAGATTGCCTGTA
TGGGGGGTTATTCCTTAACACGGCGCTCTTCTCCCAGCTCTCCCACGCCA
TCGATATCGATATCAGCAGTACCAGTTCAATTAAAGATGCCGCCAGTAAG
ACGGCCTACGGGTCCATGACCTGGTATCATGGAAACGAAACCGGTCAGAT
TCCCGGTGCTTTCCCTAGCAAGTGGTGGGAGGGTAGCGCGCTTTTCACAA
GTTTGCTCCTCTACTGGTATTACACTGGAGACAGTACCTACAACGACGAG
GTCCGTCAGGGTATGCAATGGCAGGCGGGTGACTGCGATTACATGCCCGC
CAATTACAGTAGTTACCTGGGTAACGACGATCAAATGTTCTGGGGTCTTG
CCGCCATCACCGCTGCCGAGATCGAATTCGCCGACAGCTCCTCCGGATAT
TCCTGGCTCGCTTTGGCCCAGGGTGTTTACAACACTCAGATCGACCGATG
GGATGATTCGACATGTGGCGGCGGTTTGCGCTGGCAGATCTACCCTTACG
AGGCCGGTTACGCCATGAAGAACTCCATCTCGAACGGAGGTTTGTTCCAA
CTCGCCGCCCGCCTGGCCCGCTACACCTCAAACGACACATACGCCGACTG
GGCAGAGAAGATCTTCGATTGGTGTGCCTCGACTCCGTTGCTAAACAACG
AGACTTGGAACGTGGCCGACTCCACCGATGTCGATAACAGCTGCTCCACC
CAAGGCAACAACCAGTGGTCTTACAACTACGGCGTGTTCTTGACGGGAGC
CGCGTACATGTACAACTATACCGGCAAGGCCAAGTGGAAGACTGCGGCGG
AGGGCCTCTTGAACGTCACGCTCGACACCTTTTTCCCGGCGAAGTATGGT
GGAAACATCATGTCCGAAATTCTCTGTGAGCCGACCGAAGTGTGCAATGA
CAACGAAATTCTGTTCAAGGGTCTCGTCACCGGATGGCTTGGACTTGTGG
CCCTAGTGATGCCGTCGACGTATGATAGCATTTTGCCAAAGCTGCAGGGG
TCTGCCGAAGCTGCCGCAGCCTCCTGCAGCGGAATGAGCAACAACACTTG
TGGTGTGCGCTGGTGGCCCAAGAAGTGGGATGGATGGAACGGAATGGAGG
AGGAAATCGCCGTCACCAACGTTCTATCCTCCGCGTTGGTCAACACGAAG
AAAACCGCCCCTGTGACCTCCAGCACCGGAGGCAATAGTAGTAGTGATCC
GAACGCAGGTACGGGCGACAACACCGGGAGCAGCGGCAGTACCGAATCGA
AGATCACCACGGGCGACAAGGCGGGTGCCTCCATCCTGACCATTGCCTTT
GTGGGCATGTGGGGAGGTATGATCGCTTGGATGGTCATTGGCGGTTGAAT
GCGTCTCGTTCGAGATTGCCTGTATGGGGGGTTATTCCTTAACACGGCGC
TCTTCTCCCAGCTCTCCCACGCCATCGATATCGATATCAGCAGTACCAGT
TCAATTAAAGATGCCGCCAGTAAGACGGCCTACGGGTCCATGACCTGGTA
TCATGGAAACGAAACCGGTCAGATTCCCGGTGCTTTCCCTAGCAAGTGGT
GGGAGGGTAGCGCGCTTTTCACAAGTTTGCTCCTCTACTGGTATTACACT
GGAGACAGTACCTACAACGACGAGGTCCGTCAGGGTATGCAATGGCAGGC
GGGTGACTGCGATTACATGCCCGCCAATTACAGTAGTTACCTGGGTAACG
ACGATCAAATGTTCTGGGGTCTTGCCGCCATCACCGCTGCCGAGATCGAA
TTCGCCGACAGCTCCTCCGGATATTCCTGGCTCGCTTTGGCCCAGGGTGT
TTACAACACTCAGATCGACCGATGGGATGATTCGACATGTGGCGGCGGTT
TGCGCTGGCAGATCTACCCTTACGAGGCCGGTTACGCCATGAAGAACTCC
ATCTCGAACGGAGGTTTGTTCCAACTCGCCGCCCGCCTGGCCCGCTACAC
CTCAAACGACACATACGCCGACTGGGCAGAGAAGATCTTCGATTGGTGTG
CCTCGACTCCGTTGCTAAACAACGAGACTTGGAACGTGGCCGACTCCACC
GATGTCGATAACAGCTGCTCCACCCAAGGCAACAACCAGTGGTCTTACAA
CTACGGCGTGTTCTTGACGGGAGCCGCGTACATGTACAACTATACCGGCA
AGGCCAAGTGGAAGACTGCGGCGGAGGGCCTCTTGAACGTCACGCTCGAC
ACCTTTTTCCCGGCGAAGTATGGTGGAAACATCATGTCCGAAATTCTCTG
TGAGCCGACCGAAGTGTGCAATGACAACGAAATTCTGTTCAAGGGTCTCG
TCACCGGATGGCTTGGACTTGTGGCCCTAGTGATGCCGTCGACGTATGAT
AGCATTTTGCCAAAGCTGCAGGGGTCTGCCGAAGCTGCCGCAGCCTCCTG
CAGCGGAATGAGCAACAACACTTGTGGTGTGCGCTGGTGGCCCAAGAAGT
GGGATGGATGGAACGGAATGGAGGAGGAAATCGCCGTCACCAACGTTCTA
TCCTCCGCGTTGGTCAACACGAAGAAAACCGCCCCTGTGACCTCCAGCAC
CGGAGGCAATAGTAGTAGTGATCCGAACGCAGGTACGGGCGACAACACCG
GGAGCAGCGGCAGTACCGAATCGAAGATCACCACGGGCGACAAGGCGGGT
GCCTCCATCCTGACCATTGCCTTTGTGGGCATGTGGGGAGGTATGATCGC
TTGGATGGTCATTGGCGGTTGAATGCGTCTCGTTCGAGATTGCCTGTATG
GGGGGTTATTCCTTAACACGGCGCTCTTCTCCCAGCTCTCCCACGCCATC
GATATCGATATCAGCAGTACCAGTTCAATTAAAGATGCCGCCAGTAAGAC
GGCCTACGGGTCCATGACCTGGTATCATGGAAACGAAACCGGTCAGATTC
CCGGTGCTTTCCCTAGCAAGTGGTGGGAGGGTAGCGCGCTTTTCACAAGT
TTGCTCCTCTACTGGTATTACACTGGAGACAGTACCTACAACGACGAGGT
CCGTCAGGGTATGCAATGGCAGGCGGGTGACTGCGATTACATGCCCGCCA
ATTACAGTAGTTACCTGGGTAACGACGATCAAATGTTCTGGGGTCTTGCC
GCCATCACCGCTGCCGAGATCGAATTCGCCGACAGCTCCTCCGGATATTC
CTGGCTCGCTTTGGCCCAGGGTGTTTACAACACTCAGATCGACCGATGGG
ATGATTCGACATGTGGCGGCGGTTTGCGCTGGCAGATCTACCCTTACGAG
GCCGGTTACGCCATGAAGAACTCCATCTCGAACGGAGGTTTGTTCCAACT
CGCCGCCCGCCTGGCCCGCTACACCTCAAACGACACATACGCCGACTGGG
CAGAGAAGATCTTCGATTGGTGTGCCTCGACTCCGTTGCTAAACAACGAG
ACTTGGAACGTGGCCGACTCCACCGATGTCGATAACAGCTGCTCCACCCA
AGGCAACAACCAGTGGTCTTACAACTACGGCGTGTTCTTGACGGGAGCCG
CGTACATGTACAACTATACCGGCAAGGCCAAGTGGAAGACTGCGGCGGAG
GGCCTCTTGAACGTCACGCTCGACACCTTTTTCCCGGCGAAGTATGGTGG
AAACATCATGTCCGAAATTCTCTGTGAGCCGACCGAAGTGTGCAATGACA
ACGAAATTCTGTTCAAGGGTCTCGTCACCGGATGGCTTGGACTTGTGGCC
CTAGTGATGCCGTCGACGTATGATAGCATTTTGCCAAAGCTGCAGGGGTC
TGCCGAAGCTGCCGCAGCCTCCTGCAGCGGAATGAGCAACAACACTTGTG
GTGTGCGCTGGTGGCCCAAGAAGTGGGATGGATGGAACGGAATGGAGGAG
GAAATCGCCGTCACCAACGTTCTATCCTCCGCGTTGGTCAACACGAAGAA
AACCGCCCCTGTGACCTCCAGCACCGGAGGCAATAGTAGTAGTGATCCGA
ACGCAGGTACGGGCGACAACACCGGGAGCAGCGGCAGTACCGAATCGAAG
ATCACCACGGGCGACAAGGCGGGTGCCTCCATCCTGACCATTGCCTTTGT
GGGCATGTGGGGAGGTATGATCGCTTGGATGGTCATTGGCGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0008496mannan endo-1,6-alpha-mannosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_20315CAN33_20315Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20315-T1.exon1CAN33_20315-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_20315-T1.exon2CAN33_20315-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_20315-T1.exon3CAN33_20315-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_20315-T1.exon4CAN33_20315-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20315-T1.cdsCAN33_20315-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20315-T1CAN33_20315-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteCAZy:GH76
DBxrefInterPro:IPR008928
DBxrefInterPro:IPR014480
DBxrefInterPro:IPR005198
DBxrefPFAM:PF03663
ProductGlycosyl hydrolase family 76 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2598778..2600487 +
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