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CAN33_25640-T1, CAN33_25640-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_25640-T1
Unique NameCAN33_25640-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2407602..2408851+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_25640-T1 ID=CAN33_25640-T1|Name=CAN33_25640-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1250bp|location=Sequence derived from alignment at NKJJ01000002.1:2407602..2408851+ (Aspergillus niger FDAARGOS_311)
ATGGCAGCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCCACGAG
GGCCTCCCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACG
CCACGACCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGC
CGCACCGCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTT
CGTTTCCGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCT
ACGCTCTTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATG
ACCCGTCTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTA
CCAGCGCCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCG
AGGAAGCCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAA
GCCGCTGCCACCGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGG
TTGCAGTTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATC
CCCATGAGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGA
TATGTGGTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGC
GCGTCATTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCA
CCCTTGTTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTG
GCGCTGGTGGCGAACTCGGGTTTGGATGTGTATGCGCATAATATTGAGAC
TGTTGAGGCGCTTACCCCCGTGTCCGTGATCGCAGGGCTACCTTCAAGCA
GAGTATTGCTGTGTTGGAGGCGGCGAAGAAGGCCAACCCGGAGGTTATTA
CGAAGTCTTCGTTGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGAG
CATGCGCTGGCGCAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCGG
GCAGTATATGCGTCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTTC
ATCCGAGATGGTTCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTTC
CTCTACTGTGCTTCTGGACCGTTGGTGCGTAGTTCTTATAAGGCTGGTGA
GGCGTTCATTGAGAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGATG
CTGTTGCCGAGAAAAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:2407602..2408851+

>CAN33_25640-T1 ID=CAN33_25640-T1|Name=CAN33_25640-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2388bp|location=Sequence derived from alignment at NKJJ01000002.1:2407602..2408851+ (Aspergillus niger FDAARGOS_311)
ATGGCAGCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCCACGAG
GGCCTCCCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACG
CCACGACCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGC
CGCACCGCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTT
CGTTTCCGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCT
ACGCTCTTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATG
ACCCGTCTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTA
CCAGCGCCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCG
AGGAAGCCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAA
GCCGCTGCCACCGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGG
TTGCAGTTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATC
CCCATGAGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGA
TATGTGGTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGC
GCGTCATTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCA
CCCTTGTTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTG
GCGCTGGTGGCGAACTCGGGTTTGGATGTGGCTACCTTCAAGCAGAGTAT
TGCTGTGTTGGAGGCGGCGAAGAAGGCCAACCCGGAGGTTATTACGAAGT
CTTCGTTGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGAGCATGCG
CTGGCGCAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCGGGCAGTA
TATGCGTCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTTCATCCGA
GATGGTTCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTTCCTCTAC
TGTGCTTCTGGACCGTTGGTGCGTAGTTCTTATAAGGCTGGTGAGGCGTT
CATTGAGAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGATGCTGTTG
CCGAGAAAAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTGAATGGCA
GCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCCACGAGGGCCTC
CCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACGCCACGA
CCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGCCGCACC
GCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTTCGTTTC
CGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCTACGCTC
TTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATGACCCGT
CTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTACCAGCG
CCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCGAGGAAG
CCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAAGCCGCT
GCCACCGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGGTTGCAG
TTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATCCCCATG
AGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGATATGTG
GTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGCGCGTCA
TTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCACCCTTG
TTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTGGCGCTG
GTGGCGAACTCGGGTTTGGATGTGGCTACCTTCAAGCAGAGTATTGCTGT
GTTGGAGGCGGCGAAGAAGGCCAACCCGGAGGTTATTACGAAGTCTTCGT
TGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGAGCATGCGCTGGCG
CAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCGGGCAGTATATGCG
TCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTTCATCCGAGATGGT
TCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTTCCTCTACTGTGCT
TCTGGACCGTTGGTGCGTAGTTCTTATAAGGCTGGTGAGGCGTTCATTGA
GAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGATGCTGTTGCCGAGA
AAAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009107lipoate biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
GO:0016992lipoate synthase activity
GO:0003824catalytic activity
GO:0051536iron-sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_25640CAN33_25640Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25640-T1.exon1CAN33_25640-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_25640-T1.exon2CAN33_25640-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25640-T1.cdsCAN33_25640-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25640-T1CAN33_25640-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926131E
DBxrefInterPro:IPR007197
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR003698
DBxrefInterPro:IPR031691
DBxrefInterPro:IPR006638
DBxrefPFAM:PF16881
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2407602..2408851 +
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