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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2407602..2408851+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_25640-T1 ID=CAN33_25640-T1|Name=CAN33_25640-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1250bp|location=Sequence derived from alignment at NKJJ01000002.1:2407602..2408851+ (Aspergillus niger FDAARGOS_311)
ATGGCAGCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCCACGAG
GGCCTCCCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACG
CCACGACCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGC
CGCACCGCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTT
CGTTTCCGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCT
ACGCTCTTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATG
ACCCGTCTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTA
CCAGCGCCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCG
AGGAAGCCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAA
GCCGCTGCCACCGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGG
TTGCAGTTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATC
CCCATGAGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGA
TATGTGGTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGC
GCGTCATTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCA
CCCTTGTTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTG
GCGCTGGTGGCGAACTCGGGTTTGGATGTGTATGCGCATAATATTGAGAC
TGTTGAGGCGCTTACCCCCGTGTCCGTGATCGCAGGGCTACCTTCAAGCA
GAGTATTGCTGTGTTGGAGGCGGCGAAGAAGGCCAACCCGGAGGTTATTA
CGAAGTCTTCGTTGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGAG
CATGCGCTGGCGCAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCGG
GCAGTATATGCGTCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTTC
ATCCGAGATGGTTCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTTC
CTCTACTGTGCTTCTGGACCGTTGGTGCGTAGTTCTTATAAGGCTGGTGA
GGCGTTCATTGAGAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGATG
CTGTTGCCGAGAAAAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTGA
back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2407602..2408851+ >CAN33_25640-T1 ID=CAN33_25640-T1|Name=CAN33_25640-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2388bp|location=Sequence derived from alignment at NKJJ01000002.1:2407602..2408851+ (Aspergillus niger FDAARGOS_311)
ATGGCAGCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCCACGAG
GGCCTCCCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACG
CCACGACCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGC
CGCACCGCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTT
CGTTTCCGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCT
ACGCTCTTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATG
ACCCGTCTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTA
CCAGCGCCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCG
AGGAAGCCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAA
GCCGCTGCCACCGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGG
TTGCAGTTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATC
CCCATGAGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGA
TATGTGGTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGC
GCGTCATTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCA
CCCTTGTTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTG
GCGCTGGTGGCGAACTCGGGTTTGGATGTGGCTACCTTCAAGCAGAGTAT
TGCTGTGTTGGAGGCGGCGAAGAAGGCCAACCCGGAGGTTATTACGAAGT
CTTCGTTGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGAGCATGCG
CTGGCGCAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCGGGCAGTA
TATGCGTCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTTCATCCGA
GATGGTTCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTTCCTCTAC
TGTGCTTCTGGACCGTTGGTGCGTAGTTCTTATAAGGCTGGTGAGGCGTT
CATTGAGAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGATGCTGTTG
CCGAGAAAAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTGAATGGCA
GCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCCACGAGGGCCTC
CCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACGCCACGA
CCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGCCGCACC
GCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTTCGTTTC
CGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCTACGCTC
TTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATGACCCGT
CTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTACCAGCG
CCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCGAGGAAG
CCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAAGCCGCT
GCCACCGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGGTTGCAG
TTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATCCCCATG
AGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGATATGTG
GTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGCGCGTCA
TTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCACCCTTG
TTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTGGCGCTG
GTGGCGAACTCGGGTTTGGATGTGGCTACCTTCAAGCAGAGTATTGCTGT
GTTGGAGGCGGCGAAGAAGGCCAACCCGGAGGTTATTACGAAGTCTTCGT
TGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGAGCATGCGCTGGCG
CAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCGGGCAGTATATGCG
TCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTTCATCCGAGATGGT
TCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTTCCTCTACTGTGCT
TCTGGACCGTTGGTGCGTAGTTCTTATAAGGCTGGTGAGGCGTTCATTGA
GAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGATGCTGTTGCCGAGA
AAAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009107 | lipoate biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051539 | 4 iron, 4 sulfur cluster binding |
| GO:0016992 | lipoate synthase activity |
| GO:0003824 | catalytic activity |
| GO:0051536 | iron-sulfur cluster binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926131E |
| DBxref | InterPro:IPR007197 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR003698 |
| DBxref | InterPro:IPR031691 |
| DBxref | InterPro:IPR006638 |
| DBxref | PFAM:PF16881 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2407602..2408851 + |
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